CmaCh07G012600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G012600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH101-like
Location	Cma_Chr07: 6990461 .. 6992021 (+)
RNA-Seq Expression	CmaCh07G012600
Synteny	CmaCh07G012600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCCATGATCCCTTCATCTTCTACAACTCATGGTGGGTGGATTCCAGGGAACCCTCAGTCTACAAACGGTCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGGTTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTTTGGCAGTGATGATCCTGTCGCCGTAGCTAAGAAACTTAAACATAATGCTAGCGAACGTGATCGTCGCAAGAAGATGAACTCTCTCTATACTTCTCTTCGCTGCTTGCTTCCGTCGACAAATCGAACGGTAGGTTTTGCTTCTTCGTTAAGTGTGAATGTGTTAAAATGTTTTTCAAATTTGGATATAAATTCTAATAAGATTGTGATATCCCACATTAGTTGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTATGTTAGACGCGTTTTAAAAATCTTGAGGGGAACCCCGAAAGGGAAAACCCAAAGAAGACAATATCTACTAGAGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGCCGGACACCGAGAGATGTGTCAATGAGTAGGTTGAACCCCGAAGGGGGGTGGACACGATGCGATGTGGCAGCAAAGACGTTGGGCCTCGAAAGGGGGTGGATTATGATATCCCACATCAATTGGGGAAGAGAACGAACCATTCTTTATAAGAGTGTGGAAACTCTCCCTAACAAACTCGTTTTAAAAACCTTAAAGGGAAGCCTGAAAGGGAAAACTTAAAAATGACAATATCTACTGGGATTGGGCGGTTACAAATGTATTAGAGCAAGGCTTCGGGCAATATGCCAATGAGGAGGTTGAGCCCTGAAGGGGGTGGACACAAGATGGTGTGCTAGTAAGAACGTTGGGTCTCGAAAGGGGGTGGACTGGGGAGTCCCACGTCGATCGGAGAAGGAAACGAGTGTCAGCGAGGACAAGGGCCCAGAAGGGGGGTGAACTATGATATCAGACATGGAGGAGAACGAAACATTTTTTATAAGTGTGTGGAAACCTCACCCTATCATACGCGTTCTAAAAACTTTGAGAGGAAGCCCGAAAGAAAAAGTCGTCCAAAGAGGACAATAGCTGCTAGCGTTAGACTTGAACGGTTTAAGGAGTGGTCTAGGTTACATTTAGTGAGATTAGACCTAAAACTCGATCCAACCAATTTTGATTATTTTTGACGGTCAAAAATGACTTCTTGCAGAAAACAATGAGTAATCCAGCCACAATATCAAGGGCTTTGAAGTATATTCCAGAGCTAAGACAGCAGGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATTAATGCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAAACAAGGATGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCCTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGATGAACTTCTCGTTAAGACCGTTTCTACCTTT

mRNA sequence

ATGTTAGCCATGATCCCTTCATCTTCTACAACTCATGGTGGGTGGATTCCAGGGAACCCTCAGTCTACAAACGGTCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGGTTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTTTGGCAGTGATGATCCTGTCGCCGTAGCTAAGAAACTTAAACATAATGCTAGCGAACGTGATCGTCGCAAGAAGATGAACTCTCTCTATACTTCTCTTCGCTGCTTGCTTCCGTCGACAAATCGAACGGTAGCCACAATATCAAGGGCTTTGAAGTATATTCCAGAGCTAAGACAGCAGGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATTAATGCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAAACAAGGATGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCCTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGATGAACTTCTCGTTAAGACCGTTTCTACCTTT

Coding sequence (CDS)

ATGTTAGCCATGATCCCTTCATCTTCTACAACTCATGGTGGGTGGATTCCAGGGAACCCTCAGTCTACAAACGGTCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGGTTGAGAGCTGTTCTCCACCATCAGCTGGTGACGGTCGTCATCGTGGTGGCGGTGGCTTTGGCAGTGATGATCCTGTCGCCGTAGCTAAGAAACTTAAACATAATGCTAGCGAACGTGATCGTCGCAAGAAGATGAACTCTCTCTATACTTCTCTTCGCTGCTTGCTTCCGTCGACAAATCGAACGGTAGCCACAATATCAAGGGCTTTGAAGTATATTCCAGAGCTAAGACAGCAGGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATTAATGCCATAACTCATGACCAACAAAAGCAAGTGAGGAAAAACAAGGATGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCTAATGATACCCTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGATGAACTTCTCGTTAAGACCGTTTCTACCTTT

Protein sequence

MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTVATISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTSNDTLKLKFSQILHSLDEDELLVKTVSTF

Homology

[Close]

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-16
Identity = 68/218 (31.19%), Postives = 115/218 (52.75%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSEL----FIQFSSPQP---SHHVKVESCSPPSA 60
           M A++PS  T  G       +S  G    L    F++ + PQ    +HH      S  S 
Sbjct: 1   MCALVPSFFTNFGWPSTNQYESYYGAGDNLNNGTFLELTVPQTYEVTHHQNSLGVSVSSE 60

Query: 61  GDGRHRGGGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VA 120
           G+           D+   V KKL HNASERDRRKK+N+L++SLR  LP+++++       
Sbjct: 61  GN---------EIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPE 120

Query: 121 TISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWL 180
           T+S++LKYIPEL+QQV+ L ++K+ +  +++    D +   ++   A     S+ +   L
Sbjct: 121 TVSKSLKYIPELQQQVKRLIQKKEEILVRVSG-QRDFELYDKQQPKAVASYLSTVSATRL 180

Query: 181 RENEALLQLTSNDTLKLKFSQILHSLDEDELLVKTVST 207
            +NE ++Q++S+       S +L  ++ED  ++  VS+
Sbjct: 181 GDNEVMVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSS 208

[Close]

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 61/175 (34.86%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 40  SHHVKVESCSPPSAGDGRHRGGGGFGSDD--PVAVAKKLKHNASERDRRKKMNSLYTSLR 99
           SH++ +   S  S  +  +     +  +D   V + KKL HNASERDRR+K+N+LY+SLR
Sbjct: 31  SHNINLHHMS-LSHSNNTNSNNNNYQEEDRGAVVLEKKLNHNASERDRRRKLNALYSSLR 90

Query: 100 CLLPSTNR-----TVATISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKN 159
            LLP +++        T++R +KYIPE +Q+++ L RRK+ L  +I+  TH +Q + +  
Sbjct: 91  ALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRLSRRKEELLKRISRKTHQEQLRNKAM 150

Query: 160 KDAPWMGCSS-CAVNWLRENEALLQLTSNDTLKLKFSQILHSLDEDELLVKTVST 207
            D+     S   A NWL + E  +Q+ ++    +  S +L  L+E+ L V +VS+
Sbjct: 151 MDSIDSSSSQRIAANWLTDTEIAVQIATSKWTSV--SDMLLRLEENGLNVISVSS 202

[Close]

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.0e-15
Identity = 64/206 (31.07%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 6   PSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGGFG 65
           PS+      ++ G+  +  G     F+ F  P+ ++   V + +      G      G  
Sbjct: 15  PSTGEYDSYYLAGDILNNGG-----FLDFPVPEETYGA-VTAVTQHQNSFGVSVSSEGNE 74

Query: 66  SDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALKYIPEL 125
            D+   V KKL HNASERDRR+K+NSL++SLR  LP++ ++      AT+SR+LKYIPEL
Sbjct: 75  IDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPEL 134

Query: 126 RQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTSN 185
           ++QV++L ++K+ L  +I+    + +  V++   A     S+ +   L +NE ++Q++S+
Sbjct: 135 QEQVKKLIKKKEELLVQISG-QRNTECYVKQPPKAVANYISTVSATRLGDNEVMVQISSS 194

Query: 186 DTLKLKFSQILHSLDEDELLVKTVST 207
                  S +L  L+ED  ++  +S+
Sbjct: 195 KIHNFSISNVLSGLEEDRFVLVDMSS 213

[Close]

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot
Match: Q0JFZ0 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 60  GGGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT----VATISRALK 119
           G GG GS       +KL HNA ERDRRK++N LY+SLR LLP  + T      T+SR LK
Sbjct: 61  GSGGSGSH------RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKLSIPTTVSRVLK 120

Query: 120 YIPELRQQVEELRRRKQGLET 137
           YIPEL++QVE L R+K+ L T
Sbjct: 121 YIPELQKQVENLERKKKELTT 135

[Close]

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12
Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 60  GGGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRAL 119
           G GG GS       +KL HNA ERDRRK++N LY+SLR LLP  + T       T+SR L
Sbjct: 61  GSGGSGSH------RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVL 120

Query: 120 KYIPELRQQVEELRRRKQGLET 137
           KYIPEL++QVE L R+K+ L T
Sbjct: 121 KYIPELQKQVENLERKKKELTT 136

[Close]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL
Match: A0A6J1HRN3 (transcription factor bHLH101-like OS=Cucurbita maxima OX=3661 GN=LOC111466098 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.1e-108
Identity = 206/212 (97.17%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60
           MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG
Sbjct: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60

Query: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALK 120
           GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT      ATISRALK
Sbjct: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTKTMSNPATISRALK 120

Query: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180
           YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL
Sbjct: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180

Query: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF
Sbjct: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 212

[Close]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL
Match: A0A6J1EBF8 (transcription factor bHLH101-like OS=Cucurbita moschata OX=3662 GN=LOC111432509 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.1e-105
Identity = 200/212 (94.34%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60
           MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSP+PSHHVKVESCSPPSAGDGRHRG
Sbjct: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPRPSHHVKVESCSPPSAGDGRHRG 60

Query: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALK 120
           GGG G DDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT      ATISRALK
Sbjct: 61  GGGCGGDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTKTMSNPATISRALK 120

Query: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180
           YIPELRQ VEELRRRKQGLETKINAITHDQQKQVRKNK+APWMGCSSCAVNWLRENEALL
Sbjct: 121 YIPELRQHVEELRRRKQGLETKINAITHDQQKQVRKNKEAPWMGCSSCAVNWLRENEALL 180

Query: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           QLTSNDT KLKFSQILHSLDEDELLVKTVSTF
Sbjct: 181 QLTSNDTFKLKFSQILHSLDEDELLVKTVSTF 212

[Close]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL
Match: A0A1S3C1M0 (transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 103/186 (55.38%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 29  ELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGGFGSDDPVAVAKKLKHNASERDRRKK 88
           E F QFSS QPS  VK+ESC    +         G   DD  A+ KKLKHNA+ERDRR+K
Sbjct: 2   EPFYQFSSLQPSQQVKLESCPTLLS--------AGVVGDDITAMDKKLKHNANERDRRRK 61

Query: 89  MNSLYTSLRCLLPSTN-----RTVATISRALKYIPELRQQVEELRRRKQGLETKINAITH 148
           +NSLY SLRCLLP T+        +TIS+ALKYIPEL+QQVE LRRRK+GL TK+N    
Sbjct: 62  INSLYYSLRCLLPPTDSMKRMSNPSTISKALKYIPELQQQVEGLRRRKEGLVTKLN---E 121

Query: 149 DQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTSNDT--LKLKFSQILHSLDEDELLV 208
           +  KQ+RKN   PWM  S CAVNWL E EALLQ+   +    +L FSQIL SL++D LL+
Sbjct: 122 ENLKQIRKNNKEPWMS-SLCAVNWLSETEALLQIALEEQTHTQLPFSQILLSLEDDGLLL 175

[Close]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL
Match: A0A6A1WAC1 (Transcription factor ORG2 OS=Morella rubra OX=262757 GN=CJ030_MR2G023437 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.3e-21
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 27  SSELFIQF--SSPQPSHHVKVESCSPPSAGDGRHRGGGGFGSDDPVAVAKKLKHNASERD 86
           +SE F+Q   S PQ  H+  V+S S              +G  DP+ V KKL HNASERD
Sbjct: 36  TSESFLQVPPSQPQVDHNQYVQSTSI-------------YG--DPLKV-KKLNHNASERD 95

Query: 87  RRKKMNSLYTSLRCLLPSTNRT-----VATISRALKYIPELRQQVEELRRRKQGLETKIN 146
           RRKK+N+LYTSLR LLP  ++T      AT+SR LKYIPEL++QVE L ++K+ L +K++
Sbjct: 96  RRKKINTLYTSLRSLLPGPDQTKKLSVPATVSRVLKYIPELQEQVEGLLQKKEELLSKLS 155

Query: 147 AITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTSNDTLKLKFSQILHSLDEDEL 206
               +   Q ++NK+A    CS+ + + L + E ++Q+T+  + KL  ++IL  L+E+ L
Sbjct: 156 R-HGNLSHQEKQNKNAALTSCSAVSASRLNDREVIIQMTTYKSHKLSLTEILVYLEENGL 206

Query: 207 LVKTVSTF 208
           L+   S+F
Sbjct: 216 LLLNASSF 206

[Close]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL
Match: A0A0A0KYH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-19
Identity = 62/102 (60.78%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 108 ATISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNW 167
           +TIS+ALKYIPEL+QQVE LRRRK+GL TK+N    +  KQ+RKN   PWM  S CAVNW
Sbjct: 12  STISKALKYIPELQQQVEGLRRRKEGLVTKLN---EENLKQIRKNNKEPWMS-SFCAVNW 71

Query: 168 LRENEALLQLTSNDT--LKLKFSQILHSLDEDELLVKTVSTF 208
           L E EALLQ+   D    +L FSQIL SL+ED LL+ T S+F
Sbjct: 72  LSETEALLQIALEDQTHTQLPFSQILLSLEEDGLLLLTASSF 109

[Close]

BLAST of CmaCh07G012600 vs. NCBI nr
Match: XP_022966445.1 (transcription factor bHLH101-like [Cucurbita maxima])

HSP 1 Score: 401.0 bits (1029), Expect = 6.3e-108
Identity = 206/212 (97.17%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60
           MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG
Sbjct: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60

Query: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALK 120
           GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT      ATISRALK
Sbjct: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTKTMSNPATISRALK 120

Query: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180
           YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL
Sbjct: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180

Query: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF
Sbjct: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 212

[Close]

BLAST of CmaCh07G012600 vs. NCBI nr
Match: XP_022925194.1 (transcription factor bHLH101-like [Cucurbita moschata])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 200/212 (94.34%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60
           MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSP+PSHHVKVESCSPPSAGDGRHRG
Sbjct: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPRPSHHVKVESCSPPSAGDGRHRG 60

Query: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALK 120
           GGG G DDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT      ATISRALK
Sbjct: 61  GGGCGGDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTKTMSNPATISRALK 120

Query: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180
           YIPELRQ VEELRRRKQGLETKINAITHDQQKQVRKNK+APWMGCSSCAVNWLRENEALL
Sbjct: 121 YIPELRQHVEELRRRKQGLETKINAITHDQQKQVRKNKEAPWMGCSSCAVNWLRENEALL 180

Query: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           QLTSNDT KLKFSQILHSLDEDELLVKTVSTF
Sbjct: 181 QLTSNDTFKLKFSQILHSLDEDELLVKTVSTF 212

[Close]

BLAST of CmaCh07G012600 vs. NCBI nr
Match: KAG6595594.1 (Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.5 bits (981), Expect = 2.3e-102
Identity = 195/212 (91.98%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60
           MLAMIPSSSTTHGGWIPGNPQSTN RSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG
Sbjct: 1   MLAMIPSSSTTHGGWIPGNPQSTNSRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRG 60

Query: 61  GGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALK 120
           GGG G DDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNR+      ATISRALK
Sbjct: 61  GGGCGGDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRSKTMSNPATISRALK 120

Query: 121 YIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALL 180
           YIPELRQ VEELRRRKQGLETKIN+ITHDQQKQVRK+K+APWMGCSSCAVNWLRENEALL
Sbjct: 121 YIPELRQHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALL 180

Query: 181 QLTSNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           QLTSNDT KLKFSQILHSLDE+ELLVKT+STF
Sbjct: 181 QLTSNDTFKLKFSQILHSLDEEELLVKTISTF 212

[Close]

BLAST of CmaCh07G012600 vs. NCBI nr
Match: XP_023518049.1 (transcription factor bHLH101-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 194/209 (92.82%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 4   MIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGG 63
           MIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDG HRGGGG
Sbjct: 1   MIPSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGHHRGGGG 60

Query: 64  FGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALKYIP 123
            G DDP+AVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT      ATISRALKYIP
Sbjct: 61  CGGDDPLAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRTKTMSNPATISRALKYIP 120

Query: 124 ELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLT 183
           ELRQ VEELRRRKQGLETKINA+THDQQKQVRKNK+APWMGCSSCAVNWLRENEALLQLT
Sbjct: 121 ELRQHVEELRRRKQGLETKINAMTHDQQKQVRKNKEAPWMGCSSCAVNWLRENEALLQLT 180

Query: 184 SNDTLKLKFSQILHSLDEDELLVKTVSTF 208
           SNDT KLKFSQIL SLDEDELLVKTVSTF
Sbjct: 181 SNDTFKLKFSQILRSLDEDELLVKTVSTF 209

[Close]

BLAST of CmaCh07G012600 vs. NCBI nr
Match: XP_038882377.1 (transcription factor bHLH101-like [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 140/222 (63.06%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTN-------GRSSELFIQFSSPQPSHHVKVESCSPPSA 60
           MLA IPSS TTHGGW+  N   +N       G   E FIQFSSPQ S HVK+E+CSPPSA
Sbjct: 1   MLATIPSSFTTHGGWLSENALISNQWTDGGSGDGLEPFIQFSSPQSSQHVKLEACSPPSA 60

Query: 61  GDGRHRGGGGFG--SDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTN-----RT 120
           GDG HRGGG  G  + D  A+AKKLKHNASERDRR+K+NSLY SLRCLLP+TN       
Sbjct: 61  GDGGHRGGGCTGNVNHDLTAIAKKLKHNASERDRRRKINSLYYSLRCLLPATNPMKRMSN 120

Query: 121 VATISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVN 180
            +TIS+ALKYIPEL+QQVE LRRRKQGL TK+N+ T  ++KQ RKN   PWM  S CA+N
Sbjct: 121 PSTISKALKYIPELQQQVEGLRRRKQGLVTKVNSTTL-EEKQKRKNNKVPWMS-SLCALN 180

Query: 181 WLRENEALLQLTSNDTLK-LKFSQILHSLDEDELLVKTVSTF 208
            L E EALLQ+ S +TLK L FSQIL SL+ED LL+ T S+F
Sbjct: 181 LLSETEALLQIASKETLKQLPFSQILLSLEEDGLLLLTASSF 220

[Close]

BLAST of CmaCh07G012600 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19
Identity = 59/147 (40.14%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 67  DDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT----VATISRALKYIPELRQ 126
           D+PV V KKL HNASER+RRKK+N++++SLR  LP TN+T     AT+S+ALKYIPEL++
Sbjct: 56  DNPV-VMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTKLSVSATVSQALKYIPELQE 115

Query: 127 QVEELRRRKQGLETKINA---ITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTS 186
           QV++L ++K+ L  +I+    + +  Q    K+++      S+ +   L E E ++Q++S
Sbjct: 116 QVKKLMKKKEELSFQISGQRDLVYTDQNS--KSEEGVTSYASTVSSTRLSETEVMVQISS 175

Query: 187 NDTLKLKFSQILHSLDEDELLVKTVST 207
             T K  F  +L  ++ED L++   S+
Sbjct: 176 LQTEKCSFGNVLSGVEEDGLVLVGASS 199

[Close]

BLAST of CmaCh07G012600 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 59/148 (39.86%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 67  DDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALKYIPELR 126
           D+PV V KKL HNASER+RRKK+N++++SLR  LP TN+T      AT+S+ALKYIPEL+
Sbjct: 56  DNPV-VMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQ 115

Query: 127 QQVEELRRRKQGLETKINA---ITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLT 186
           +QV++L ++K+ L  +I+    + +  Q    K+++      S+ +   L E E ++Q++
Sbjct: 116 EQVKKLMKKKEELSFQISGQRDLVYTDQNS--KSEEGVTSYASTVSSTRLSETEVMVQIS 175

Query: 187 SNDTLKLKFSQILHSLDEDELLVKTVST 207
           S  T K  F  +L  ++ED L++   S+
Sbjct: 176 SLQTEKCSFGNVLSGVEEDGLVLVGASS 200

[Close]

BLAST of CmaCh07G012600 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 68/218 (31.19%), Postives = 115/218 (52.75%), Query Frame = 0


Query: 1   MLAMIPSSSTTHGGWIPGNPQSTNGRSSEL----FIQFSSPQP---SHHVKVESCSPPSA 60
           M A++PS  T  G       +S  G    L    F++ + PQ    +HH      S  S 
Sbjct: 1   MCALVPSFFTNFGWPSTNQYESYYGAGDNLNNGTFLELTVPQTYEVTHHQNSLGVSVSSE 60

Query: 61  GDGRHRGGGGFGSDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VA 120
           G+           D+   V KKL HNASERDRRKK+N+L++SLR  LP+++++       
Sbjct: 61  GN---------EIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPE 120

Query: 121 TISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWL 180
           T+S++LKYIPEL+QQV+ L ++K+ +  +++    D +   ++   A     S+ +   L
Sbjct: 121 TVSKSLKYIPELQQQVKRLIQKKEEILVRVSG-QRDFELYDKQQPKAVASYLSTVSATRL 180

Query: 181 RENEALLQLTSNDTLKLKFSQILHSLDEDELLVKTVST 207
            +NE ++Q++S+       S +L  ++ED  ++  VS+
Sbjct: 181 GDNEVMVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSS 208

[Close]

BLAST of CmaCh07G012600 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 9.3e-17
Identity = 61/175 (34.86%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 40  SHHVKVESCSPPSAGDGRHRGGGGFGSDD--PVAVAKKLKHNASERDRRKKMNSLYTSLR 99
           SH++ +   S  S  +  +     +  +D   V + KKL HNASERDRR+K+N+LY+SLR
Sbjct: 31  SHNINLHHMS-LSHSNNTNSNNNNYQEEDRGAVVLEKKLNHNASERDRRRKLNALYSSLR 90

Query: 100 CLLPSTNR-----TVATISRALKYIPELRQQVEELRRRKQGLETKINAITHDQQKQVRKN 159
            LLP +++        T++R +KYIPE +Q+++ L RRK+ L  +I+  TH +Q + +  
Sbjct: 91  ALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRLSRRKEELLKRISRKTHQEQLRNKAM 150

Query: 160 KDAPWMGCSS-CAVNWLRENEALLQLTSNDTLKLKFSQILHSLDEDELLVKTVST 207
            D+     S   A NWL + E  +Q+ ++    +  S +L  L+E+ L V +VS+
Sbjct: 151 MDSIDSSSSQRIAANWLTDTEIAVQIATSKWTSV--SDMLLRLEENGLNVISVSS 202

[Close]

BLAST of CmaCh07G012600 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-16
Identity = 64/206 (31.07%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 6   PSSSTTHGGWIPGNPQSTNGRSSELFIQFSSPQPSHHVKVESCSPPSAGDGRHRGGGGFG 65
           PS+      ++ G+  +  G     F+ F  P+ ++   V + +      G      G  
Sbjct: 15  PSTGEYDSYYLAGDILNNGG-----FLDFPVPEETYGA-VTAVTQHQNSFGVSVSSEGNE 74

Query: 66  SDDPVAVAKKLKHNASERDRRKKMNSLYTSLRCLLPSTNRT-----VATISRALKYIPEL 125
            D+   V KKL HNASERDRR+K+NSL++SLR  LP++ ++      AT+SR+LKYIPEL
Sbjct: 75  IDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPEL 134

Query: 126 RQQVEELRRRKQGLETKINAITHDQQKQVRKNKDAPWMGCSSCAVNWLRENEALLQLTSN 185
           ++QV++L ++K+ L  +I+    + +  V++   A     S+ +   L +NE ++Q++S+
Sbjct: 135 QEQVKKLIKKKEELLVQISG-QRNTECYVKQPPKAVANYISTVSATRLGDNEVMVQISSS 194

Query: 186 DTLKLKFSQILHSLDEDELLVKTVST 207
                  S +L  L+ED  ++  +S+
Sbjct: 195 KIHNFSISNVLSGLEEDRFVLVDMSS 213

The following BLAST results are available for this feature:

BLAST of CmaCh07G012600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1K1	2.7e-16	31.19	Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1	[more]
Q9FYE6	1.3e-15	34.86	Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=...	[more]
Q9M1K0	5.0e-15	31.07	Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1	[more]
Q0JFZ0	4.0e-12	54.32	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
A2WZ60	5.2e-12	53.66	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of CmaCh07G012600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRN3	3.1e-108	97.17	transcription factor bHLH101-like OS=Cucurbita maxima OX=3661 GN=LOC111466098 PE...	[more]
A0A6J1EBF8	7.1e-105	94.34	transcription factor bHLH101-like OS=Cucurbita moschata OX=3662 GN=LOC111432509 ...	[more]
A0A1S3C1M0	2.8e-37	55.38	transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 S...	[more]
A0A6A1WAC1	8.3e-21	41.49	Transcription factor ORG2 OS=Morella rubra OX=262757 GN=CJ030_MR2G023437 PE=4 SV...	[more]
A0A0A0KYH3	3.5e-19	60.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1	[more]

BLAST of CmaCh07G012600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966445.1	6.3e-108	97.17	transcription factor bHLH101-like [Cucurbita maxima]	[more]
XP_022925194.1	1.5e-104	94.34	transcription factor bHLH101-like [Cucurbita moschata]	[more]
KAG6595594.1	2.3e-102	91.98	Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023518049.1	3.4e-101	92.82	transcription factor bHLH101-like [Cucurbita pepo subsp. pepo]	[more]
XP_038882377.1	1.7e-57	63.06	transcription factor bHLH101-like [Benincasa hispida]	[more]

BLAST of CmaCh07G012600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41240.2	2.0e-19	40.14	basic helix-loop-helix protein 100	[more]
AT2G41240.1	2.6e-19	39.86	basic helix-loop-helix protein 100	[more]
AT3G56970.1	1.9e-17	31.19	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G04150.1	9.3e-17	34.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56980.1	3.6e-16	31.07	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR13935:SF41	TRANSCRIPTION FACTOR ORG2-RELATED	coord: 1..207
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 79..126 e-value: 1.2E-5 score: 34.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 74..120 e-value: 4.1E-7 score: 29.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 73..130 score: 9.851441
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 70..152 e-value: 9.6E-13 score: 49.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 74..140
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 1..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G012600.1	CmaCh07G012600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity