CmaCh07G012560 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G012560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	major pollen allergen Ole e 6-like
Location	Cma_Chr07: 6966243 .. 6967037 (-)
RNA-Seq Expression	CmaCh07G012560
Synteny	CmaCh07G012560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTAAGAAAAAAAAACATAAATAAAGACACAAAAGTCGAAGAATTTTCTTCAAGGCAAGAAAAAAATGGCAAAGAAGATGATGGCAGTGGTTCTTATGTGCGTTTTGATGGTATCGGTATTGCAATTCTCCACCGCTGACAAATCATCGGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAACGACTTTGGCTCTGTGGAGGCAAATTTTAAAACGTGTTCTGCAGCTTGCCATAAGAAATGCACGGATGCTGCATGTCGTCATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAGTACATTTTTCTATCTTTTTAGACAAATCTTTTTAACATGTAAACTCTTTATTCTAACCTATTAACCCTTAGTTTAAATGTATAGTTGTCTCATCGAATTCTGGTATTATCGAATTCTGGTATTAGACTGACTCAATAGACGTGGAAGTTTGATTTCATATCAAATTTTTCTTTTTTATTTAAGTAGGTGAGATTCTTAATTTTCAATTTTGTACATTATTATTAATTTTTGTTGTGCTTATTTTGCAGATAAATTTAAGATCAAGATACCTCAATGATTATCGAAGAGGATAAAATGAAAAGTGAGCGATGAAGAAGGATTCATTTGATGGAGAACATCAAATATGATTTATTTAAATAATATTTGTTTCATTTTTGTAATTTATTTATTTTTTATTATAAATTGTTTCTTTAATATAGTTCGGTTTATTTCTTTATTTTTTCAATCCAACTACCCAACAAAATTCAATTGATTTATAGTTTTTATGC

mRNA sequence

CAAATTAAGAAAAAAAAACATAAATAAAGACACAAAAGTCGAAGAATTTTCTTCAAGGCAAGAAAAAAATGGCAAAGAAGATGATGGCAGTGGTTCTTATGTGCGTTTTGATGGTATCGGTATTGCAATTCTCCACCGCTGACAAATCATCGGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAACGACTTTGGCTCTGTGGAGGCAAATTTTAAAACGTGTTCTGCAGCTTGCCATAAGAAATGCACGGATGCTGCATGTCGTCATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAGATCAAGATACCTCAATGATTATCGAAGAGGATAAAATGAAAAGTGAGCGATGAAGAAGGATTCATTTGATGGAGAACATCAAATATGATTTATTTAAATAATATTTGTTTCATTTTTGTAATTTATTTATTTTTTATTATAAATTGTTTCTTTAATATAGTTCGGTTTATTTCTTTATTTTTTCAATCCAACTACCCAACAAAATTCAATTGATTTATAGTTTTTATGC

Coding sequence (CDS)

ATGGCAAAGAAGATGATGGCAGTGGTTCTTATGTGCGTTTTGATGGTATCGGTATTGCAATTCTCCACCGCTGACAAATCATCGGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAACGACTTTGGCTCTGTGGAGGCAAATTTTAAAACGTGTTCTGCAGCTTGCCATAAGAAATGCACGGATGCTGCATGTCGTCATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAGATCAAGATACCTCAATGA

Protein sequence

MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKCTDAACRHKCDADCGKKEVENKFKIKIPQ

Homology

[Close]

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL
Match: A0A5A7T8P0 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002620 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSS--AEMEAKFKSFFNDFGSVEANFKTCSAACHK 60
          MAKKMMAV LMC+++V+ LQF+TA+K    A  EAKF          +A +K C   C K
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKF----------DAKYKACFVICEK 60

Query: 61 KCTD-----AACRHKCDADCGKKEVENKFKI 85
          +C +     + C  KCD DCG KE  +K  I
Sbjct: 61 ECVERGGGHSYCEVKCDEDCGAKEAADKLGI 81

[Close]

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL
Match: A0A1S3CAJ3 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.4e-07
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSS--AEMEAKFKSFFNDFGSVEANFKTCSAACHK 60
          MAKKMMAV LMC+++V+ LQF+TA+K    A  EAKF          +A +K C   C K
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKF----------DAKYKACFVICEK 60

Query: 61 KCTD-----AACRHKCDADCGKKEVENKFKI 85
          +C +     + C  KCD DCG KE  +K  I
Sbjct: 61 ECVERGGGHSYCEVKCDEDCGAKEAADKLGI 81

[Close]

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADK--SSAEMEAKFKSFFNDFGSVEANFKTCSAACHK 60
          MAKKMMAV LMC+++V+ LQF+TA+K    A  EAKF          +A +K C   C K
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKF----------DAKYKACFVTCEK 60

Query: 61 KCTD-----AACRHKCDADCGKKEVENKFKI 85
          +C +     + C  KCD DCG KE  +K  I
Sbjct: 61 ECIERGSGHSYCEVKCDEDCGAKEAADKLHI 81

[Close]

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-06
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSS--AEMEAKFKSFFNDFGSVEANFKTCSAACHK 60
          MAKKM+A+ LMC+++V+ LQF++A+K    A+ EAKF          +A +K+C   C K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKF----------DAKYKSCFKTCEK 60

Query: 61 KCTD-----AACRHKCDADCGKKEVENKFKIKI 87
          +C +     + C  KCD DC +KEV +K  I++
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-06
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSS--AEMEAKFKSFFNDFGSVEANFKTCSAACHK 60
          MAKKM+A+ LMC+++V+ LQF++A+K    A+ EAKF          +A +K+C   C K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKF----------DAKYKSCFKTCEK 60

Query: 61 KCTD-----AACRHKCDADCGKKEVENKFKIKI 87
          +C +     + C  KCD DC +KEV +K  I++
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of CmaCh07G012560 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.2 bits (422), Expect = 6.5e-38
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60
          MAKKMM VVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC
Sbjct: 1  MAKKMMTVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 TDAACRHKCDADCGKKEVENKFKIKIPQ 89
           DAACR+KCDADCGKKEVENKFKIKIPQ
Sbjct: 61 ADAACRNKCDADCGKKEVENKFKIKIPQ 88

[Close]

BLAST of CmaCh07G012560 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60
          MAKKMM VVLMCVLMVS+LQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC
Sbjct: 1  MAKKMMTVVLMCVLMVSILQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 TDAACRHKCDADCGKKEVENKFKIKIPQ 89
           DA+CR+KCDADCGKKEVENKFKIKIPQ
Sbjct: 61 ADASCRNKCDADCGKKEVENKFKIKIPQ 88

[Close]

BLAST of CmaCh07G012560 vs. NCBI nr
Match: KAG6595592.1 (hypothetical protein SDJN03_12145, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60
          MAKKMMAVVLM VLM+SVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC
Sbjct: 1  MAKKMMAVVLMSVLMISVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 TDAACRHKCDADCGKKEVENKFKIKIPQ 89
           DA CR+KCDADCGKKEVENKFKIKIPQ
Sbjct: 61 ADAPCRNKCDADCGKKEVENKFKIKIPQ 88

[Close]

BLAST of CmaCh07G012560 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.8 bits (408), Expect = 2.7e-36
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60
          MAKKMM VVLMCVL+VSVLQFSTADKSSAEMEAKFKSFF+DFGSVEANFKTCSAACHKKC
Sbjct: 1  MAKKMMTVVLMCVLIVSVLQFSTADKSSAEMEAKFKSFFSDFGSVEANFKTCSAACHKKC 60

Query: 61 TDAACRHKCDADCGKKEVENKFKIKIP 88
           DAACR+KCDADCGKKEVENKFKIKIP
Sbjct: 61 ADAACRNKCDADCGKKEVENKFKIKIP 87

[Close]

BLAST of CmaCh07G012560 vs. NCBI nr
Match: KAG6595590.1 (hypothetical protein SDJN03_12143, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60
          MAKKMMA+VLMCVLMV VLQFSTADKSSAEMEAKFKSFF+DFGSVEANFKTCSAACHKKC
Sbjct: 1  MAKKMMAMVLMCVLMVLVLQFSTADKSSAEMEAKFKSFFSDFGSVEANFKTCSAACHKKC 60

Query: 61 TDAACRHKCDADCGKKEVENKF 83
           DA CR+KCDADCGKKEVE+ F
Sbjct: 61 ADAPCRNKCDADCGKKEVESTF 82

The following BLAST results are available for this feature:

BLAST of CmaCh07G012560 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh07G012560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8P0	6.4e-07	43.96	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CAJ3	6.4e-07	43.96	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 ...	[more]
A0A0A0KDP7	1.4e-06	43.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1	[more]
A0A5D3BCS2	3.2e-06	39.78	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	3.2e-06	39.78	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]

BLAST of CmaCh07G012560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595588.1	6.5e-38	96.59	hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595591.1	1.9e-37	94.32	hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595592.1	1.6e-36	94.32	hypothetical protein SDJN03_12145, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595589.1	2.7e-36	94.25	hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595590.1	2.0e-31	90.24	hypothetical protein SDJN03_12143, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh07G012560 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 45..87 e-value: 1.4E-7 score: 32.9
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 46..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G012560.1	CmaCh07G012560.1	mRNA