CmaCh07G010340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G010340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-CH-type domain-containing protein
Location	Cma_Chr07: 5397563 .. 5398623 (-)
RNA-Seq Expression	CmaCh07G010340
Synteny	CmaCh07G010340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTTTGGAGACAGCCGGAGTAGATTTGGAGGAAGGGGGTCGTGGTGGTGACGGCGGACGGCGGGCGGAGGCGGGTGAAGTGAAGGTGCATTCAGAGAGGGATTGTAGGATTTGCCATTTGGGGTTGGAGAGCAACAGTAGTGAGTGTGGAACTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTGAAGCTTGGTTCAAAATCAGAGGAAACAAGTGAGTTTTAATTTCAAATCCCTTTTCGATTTCACGGTTCTTAAACTAATCTGCTGAGAATTTGAATATAGATAGAATTGTTCTTAGTTGGGATCTTTTTTTAGTGTTTTTGGGAAGCTTGAGAAGGCTGTAGAAAGGAAAAAATTAAAACAAAAACAATGCAATCTTAGTCAAAAGGAATGGAATGGAATGGAATAGAATACGGAATTGAGAAACGAAGCATTATAAAAAAGTTATTCAATTCGTCTTCACTTCATTAACTCTCTACCTTATAATATTATTCTCTTACCTTTCATACACACTAGAATCTCTCATTGATTTATTTTTAAAGTGTATGTCTTTAATAAAGAGGAGATTAGATGTCTTGACGTTACATTATTTGTATCATTCTTAATATATGTATCTTCTTAATTTAAATGTGGTCCTTTTTTTTCTTTGGTTAGGACGTGTGAGATATGTCATTCTATTGTACAAAATGTAGGAGTACATGAACTCGAACAAATGGAGCAACTCCACGAGTTAAACAATGGGACGCTATCGACTACCACGGTGGCTGCTGCTTCCGATGGTGGTCGGAGGTTTTGGCAGGTTCATCGCGTCCTGAATTTTTTTCTTGCTTGTATTGTATTTGCTTTTGTCATATCTTGGTTGTTTCATTTCAATATGCGGTCATAAAACGGTTGTGTACAAAGAAAGGTTTCAATCTTTAAGTTTTAAGTAGCGGTTTCTTTAATCAAGTTTACCTATAAGAAAATGGTAAACAATTGGTGACAAGAAACCACAGTAATGGATTAACAAAGCCACAACAACCTT

mRNA sequence

ATGGCGGCTTTGGAGACAGCCGGAGTAGATTTGGAGGAAGGGGGTCGTGGTGGTGACGGCGGACGGCGGGCGGAGGCGGGTGAAGTGAAGGTGCATTCAGAGAGGGATTGTAGGATTTGCCATTTGGGGTTGGAGAGCAACAGTAGTGAGTGTGGAACTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTGAAGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTATTGTACAAAATGTAGGAGTACATGAACTCGAACAAATGGAGCAACTCCACGAGTTAAACAATGGGACGCTATCGACTACCACGGTGGCTGCTGCTTCCGATGGTGGTCGGAGGTTTTGGCAGGTTCATCGCGTCCTGAATTTTTTTCTTGCTTGTATTGTATTTGCTTTTGTCATATCTTGGTTGTTTCATTTCAATATGCGGTCATAAAACGGTTGTGTACAAAGAAAGGTTTCAATCTTTAAGTTTTAAGTAGCGGTTTCTTTAATCAAGTTTACCTATAAGAAAATGGTAAACAATTGGTGACAAGAAACCACAGTAATGGATTAACAAAGCCACAACAACCTT

Coding sequence (CDS)

ATGGCGGCTTTGGAGACAGCCGGAGTAGATTTGGAGGAAGGGGGTCGTGGTGGTGACGGCGGACGGCGGGCGGAGGCGGGTGAAGTGAAGGTGCATTCAGAGAGGGATTGTAGGATTTGCCATTTGGGGTTGGAGAGCAACAGTAGTGAGTGTGGAACTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTGAAGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGTCATTCTATTGTACAAAATGTAGGAGTACATGAACTCGAACAAATGGAGCAACTCCACGAGTTAAACAATGGGACGCTATCGACTACCACGGTGGCTGCTGCTTCCGATGGTGGTCGGAGGTTTTGGCAGGTTCATCGCGTCCTGAATTTTTTTCTTGCTTGTATTGTATTTGCTTTTGTCATATCTTGGTTGTTTCATTTCAATATGCGGTCATAA

Protein sequence

MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHELNNGTLSTTTVAAASDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS

Homology

[Close]

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL
Match: A0A6J1DBE4 (uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019441 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.9e-55
Identity = 115/165 (69.70%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MAALETAG-VDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGC 60
           +AA++T G  DLE+G     G RR EA      +ERDCRICHLGLES+S ECG  IELGC
Sbjct: 18  IAAVDTPGSADLEQGRCSSGGERRREA------AERDCRICHLGLESSSDECGIGIELGC 77

Query: 61  SCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHELNNGTLSTTT 120
           SCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V NV G HE+E +EQL E NN T+STTT
Sbjct: 78  SCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVSTTT 137

Query: 121 VAAA----SDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
           VA +     +GGR FWQVHRVLNF LAC+VFAFVISWLFHFN+ S
Sbjct: 138 VATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS 176

[Close]

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL
Match: A0A5D2JJR0 (RING-CH-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G189600v1 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 96/139 (69.06%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 26  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGN 85
           A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGN
Sbjct: 86  ANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIRGN 145

Query: 86  KTCEICHSIVQN-VGVHELEQMEQLHELNNGTLSTTTVAAAS-DGGRRFWQVHRVLNFFL 145
           KTCEICHSI +N VGV+E+E  EQ +E N+ T +T  + AAS    R FW  HR LNF L
Sbjct: 146 KTCEICHSIARNVVGVNEVESTEQPNETNSSTATTAVLGAASYTESRSFWHGHRFLNFLL 205

Query: 146 ACIVFAFVISWLFHFNMRS 160
           AC+VFAFVISWLFHFN+ S
Sbjct: 206 ACMVFAFVISWLFHFNVPS 224

[Close]

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL
Match: A0A7J9JAB8 (RING-CH-type domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_014930 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 96/139 (69.06%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 26  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGN 85
           A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGN
Sbjct: 86  ANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIRGN 145

Query: 86  KTCEICHSIVQN-VGVHELEQMEQLHELNNGTLSTTTVAAAS-DGGRRFWQVHRVLNFFL 145
           KTCEICHSI +N VGV+E+E  EQ +E N+ T +T  + AAS    R FW  HR LNF L
Sbjct: 146 KTCEICHSIARNVVGVNEVESTEQPNETNSSTATTAVLGAASYTESRSFWHGHRFLNFLL 205

Query: 146 ACIVFAFVISWLFHFNMRS 160
           AC+VFAFVISWLFHFN+ S
Sbjct: 206 ACMVFAFVISWLFHFNVPS 224

[Close]

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL
Match: A0A0D2RY71 (RING-CH-type domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_006G179600 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 96/139 (69.06%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 26  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGN 85
           A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGN
Sbjct: 86  ANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIRGN 145

Query: 86  KTCEICHSIVQN-VGVHELEQMEQLHELNNGTLSTTTVAAAS-DGGRRFWQVHRVLNFFL 145
           KTCEICHSI +N VGV+E+E  EQ +E N+ T +T  + AAS    R FW  HR LNF L
Sbjct: 146 KTCEICHSIARNVVGVNEVESTEQPNETNSSTATTAVLGAASYTESRSFWHGHRFLNFLL 205

Query: 146 ACIVFAFVISWLFHFNMRS 160
           AC+VFAFVISWLFHFN+ S
Sbjct: 206 ACMVFAFVISWLFHFNVPS 224

[Close]

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL
Match: A0A5J5QA21 (RING-CH-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D09G176800v1 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 96/139 (69.06%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 26  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGN 85
           A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGN
Sbjct: 86  ANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIRGN 145

Query: 86  KTCEICHSIVQN-VGVHELEQMEQLHELNNGTLSTTTVAAAS-DGGRRFWQVHRVLNFFL 145
           KTCEICHSI +N VGV+E+E  EQ +E N+ T +T  + AAS    R FW  HR LNF L
Sbjct: 146 KTCEICHSIARNVVGVNEVESTEQPNETNSSTATTAVLGAASYTESRSFWHGHRFLNFLL 205

Query: 146 ACIVFAFVISWLFHFNMRS 160
           AC+VFAFVISWLFHFN+ S
Sbjct: 206 ACMVFAFVISWLFHFNVPS 224

[Close]

BLAST of CmaCh07G010340 vs. NCBI nr
Match: KAG6595366.1 (hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.0 bits (811), Expect = 9.2e-83
Identity = 155/163 (95.09%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60
           MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS
Sbjct: 1   MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60

Query: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHELNNGTLSTTT-- 120
           CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHE NNGTLSTTT  
Sbjct: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLSTTTVA 120

Query: 121 --VAAASDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
             VAA+ DGGRRFWQVHRVLNF LACIVFAFVISWLFHFNMRS
Sbjct: 121 ASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

[Close]

BLAST of CmaCh07G010340 vs. NCBI nr
Match: KAG7027374.1 (hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314.3 bits (804), Expect = 6.0e-82
Identity = 154/163 (94.48%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60
           MAALETAGVDLEEGGRGGDGGR AEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS
Sbjct: 1   MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60

Query: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHELNNGTLSTTT-- 120
           CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHE NNGTLSTTT  
Sbjct: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLSTTTVA 120

Query: 121 --VAAASDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
             VAA+ DGGRRFWQVHRVLNF LACIVFAFVISWLFHFNMRS
Sbjct: 121 ASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

[Close]

BLAST of CmaCh07G010340 vs. NCBI nr
Match: XP_023517920.1 (uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 156/163 (95.71%), Postives = 156/163 (95.71%), Query Frame = 0


Query: 1   MAALETAGVDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60
           MAALETAGVDLEEGGRGG GGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS
Sbjct: 1   MAALETAGVDLEEGGRGGHGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCS 60

Query: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHELNNGTLSTTTV 120
           CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV GVHELEQMEQLHELNNGTLSTTTV
Sbjct: 61  CKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGGVHELEQMEQLHELNNGTLSTTTV 120

Query: 121 A---AASDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
           A   AA DGGRRFWQVHRVLNF LACIVFAFVISWLFHFNMRS
Sbjct: 121 AASVAAPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

[Close]

BLAST of CmaCh07G010340 vs. NCBI nr
Match: XP_038883458.1 (uncharacterized protein LOC120074413 [Benincasa hispida])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 120/166 (72.29%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MAALETAGVDLEEGGRGGDGGRRAEAG-EVKVHS-ERDCRICHLGLESNSSECGTAIELG 60
           MAALETAG DLE+G R     R +  G EVKV++ ERDCRICHLGL SNS+E G  IELG
Sbjct: 1   MAALETAGADLEKGWRQTAAERGSGVGEEVKVNNLERDCRICHLGLVSNSNEFGVGIELG 60

Query: 61  CSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHELNNGTLSTT 120
           C CKNDL+ AHKHCAEAWFKIRGNKTCEICHSIV+NV  V E EQ EQLHE NNGT+ST 
Sbjct: 61  CCCKNDLSTAHKHCAEAWFKIRGNKTCEICHSIVRNVMVVREPEQTEQLHESNNGTVSTA 120

Query: 121 TVAAA----SDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
           TVAA+      GGR FW VHRVLNF LAC+VFAFVISWLFHFN+ S
Sbjct: 121 TVAASVAATPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS 166

[Close]

BLAST of CmaCh07G010340 vs. NCBI nr
Match: XP_022151515.1 (uncharacterized protein LOC111019441, partial [Momordica charantia])

HSP 1 Score: 224.2 bits (570), Expect = 8.1e-55
Identity = 115/165 (69.70%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MAALETAG-VDLEEGGRGGDGGRRAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGC 60
           +AA++T G  DLE+G     G RR EA      +ERDCRICHLGLES+S ECG  IELGC
Sbjct: 18  IAAVDTPGSADLEQGRCSSGGERRREA------AERDCRICHLGLESSSDECGIGIELGC 77

Query: 61  SCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHELNNGTLSTTT 120
           SCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V NV G HE+E +EQL E NN T+STTT
Sbjct: 78  SCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVSTTT 137

Query: 121 VAAA----SDGGRRFWQVHRVLNFFLACIVFAFVISWLFHFNMRS 160
           VA +     +GGR FWQVHRVLNF LAC+VFAFVISWLFHFN+ S
Sbjct: 138 VATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS 176

[Close]

BLAST of CmaCh07G010340 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39
Identity = 80/129 (62.02%), Postives = 91/129 (70.54%), Query Frame = 0


Query: 33  SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIV 92
           SERDCRICH+ L++ + E G  IELGCSCK DLAAAHKHCAE WFKI+GNK CE+C SI 
Sbjct: 75  SERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIA 134

Query: 93  QN-VGVHELEQMEQLHELNN-GTLSTTTVAAASDGGRRFWQVHRVLNFFLACIVFAFVIS 152
            N VG  E+E  E  +E N    L+  T       GR FWQ HR LNF LAC+VFAFVIS
Sbjct: 135 GNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVIS 194

Query: 153 WLFHFNMRS 160
           WLFHFN+ S
Sbjct: 195 WLFHFNVPS 203

[Close]

BLAST of CmaCh07G010340 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-34
Identity = 72/138 (52.17%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 26  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTC 85
           +G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNKTC
Sbjct: 67  SGSIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTC 126

Query: 86  EICHSIVQNVGVHELEQMEQLHELNNGTL---STTTVAAASDG-GRRFWQVHRVLNFFLA 145
           EIC SI QN    + E  +   E N   +   +T T+ A SD   RR  + +R LNF L 
Sbjct: 127 EICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLT 186

Query: 146 CIVFAFVISWLFHFNMRS 160
           C+V AFVISW FHFN+ S
Sbjct: 187 CMVCAFVISWFFHFNLPS 204

[Close]

BLAST of CmaCh07G010340 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-32
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 34  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQ 93
           E+DCRICHLG+E++    G AIELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC S+ +
Sbjct: 81  EKDCRICHLGVETSG---GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 94  NV-GVHEL--EQMEQLHELNNGTLSTTTVAAASDGGRRFWQVHRVLNFFLACIVFAFVIS 153
           NV G +E+    ME+  EL NG  +       +      WQ  RV+N  LAC+VF F IS
Sbjct: 141 NVGGANEMVGSTMEE-RELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMVFGFFIS 200

Query: 154 WLFHFNMRS 160
           W+FHF++ S
Sbjct: 201 WIFHFHVSS 205

[Close]

BLAST of CmaCh07G010340 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 72/198 (36.36%), Postives = 87/198 (43.94%), Query Frame = 0


Query: 9   VDLEEGG------RGGDGG-------RRAEAGEVKVHSERDCRICHLGLESNSSE----- 68
           VDLE GG      +   GG       R+    + K    RDCRICHL LE+N        
Sbjct: 40  VDLESGGVPAPEKQLHSGGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEAEDEDE 99

Query: 69  --------------------------CGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKT 128
                                      G  ++LGCSCK DL  AH  CAE WFKI+GN T
Sbjct: 100 EEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKIKGNMT 159

Query: 129 CEICHSIVQNVGVHELEQMEQLHELNNGTLSTTTVAAASDG-----GRRFWQVHRVLNFF 158
           CEIC ++  NV   +             T ST + AAA         R  W    V+NF 
Sbjct: 160 CEICGAMALNVAGEQSNP--------ESTASTHSQAAAGQSLTQTEPRGIWHGRPVMNFL 219

[Close]

BLAST of CmaCh07G010340 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 26  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNK 84
           +G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNK
Sbjct: 67  SGSIRGSPEKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of CmaCh07G010340 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh07G010340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBE4	3.9e-55	69.70	uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D2JJR0	1.3e-45	69.06	RING-CH-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332...	[more]
A0A7J9JAB8	1.3e-45	69.06	RING-CH-type domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goar...	[more]
A0A0D2RY71	1.3e-45	69.06	RING-CH-type domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_0...	[more]
A0A5J5QA21	1.3e-45	69.06	RING-CH-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_...	[more]

BLAST of CmaCh07G010340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595366.1	9.2e-83	95.09	hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027374.1	6.0e-82	94.48	hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023517920.1	1.7e-81	95.71	uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038883458.1	3.7e-55	72.29	uncharacterized protein LOC120074413 [Benincasa hispida]	[more]
XP_022151515.1	8.1e-55	69.70	uncharacterized protein LOC111019441, partial [Momordica charantia]	[more]

BLAST of CmaCh07G010340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	3.0e-39	62.02	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	4.9e-34	52.17	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	2.7e-32	52.71	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.5e-22	36.36	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	2.5e-17	60.34	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 36..89 e-value: 1.3E-14 score: 64.5
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 37..88 e-value: 2.3E-8 score: 34.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 29..95 score: 17.439644
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 22..96 e-value: 6.3E-14 score: 53.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 28..158
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 28..158
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 37..89 e-value: 1.86983E-11 score: 54.2556
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 33..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G010340.1	CmaCh07G010340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding