Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGGCAGTCGGATTCGTTGGGGAATGGGTCAGATTCCGACACCAATGGTCATAAATTTCACGCAATAAGGTCAAGCAGCCGAAGAAGGCCAACTCCTCCACGATTTTCTCCACAAGAAATTCCCCTTTCACATTAACTCTGGTCAGCCTCCGCAGGCGGTGGCGCGTGAATCAGTTGCTGGGTACTTCTACATGAACTGACGGCGTAACCCACCTGGAGAGCTGATGGGTCAAGGGCTGAGCTGCGGCGAACACCATGAAAATGGGCTATTCCGAGCTGTGCAAAATGGGGATTCGGAGCTCGTTCTGGCTATGCTGGAGGCTGATCCAACTATGATGGAACTCACCACTCCTCGTACTAAAATGTCTGTTCTTCACATCGCCGCTGCTTATGGTCAGATCGAGGTGGGTCTTGATTCCTTCTATTTTGTTCTTTCTTTTCTTGATTTGTGAATGATTATTTGGGCATTTGTTATCAGATTCTTAATATGCTCTTGGATCGGTCTGTGAATCCTGATGTGTTGAATCGCAATAAACAGGTAATGATTTCATCTAATCGCTAAGAACATTTAATCCATTTTGTTTGCACTTTGAATCTCATGTTTTGGTTTAATTTGATTTGGATTTGATGAACTTAGACACCATTAATGCTGGCTACGATGAACGGGAAGATATCTTGTGTGCAGAGATTGATTGAAGCAGGAGCAAATGTTTGTGTCCTAATTTGTATGATTTATTGAATGTTCTTGGCGTATGCTTGTTTCAATTACATAACAATGTGTTTATTCATATGATATCAATAGATTTTGATGTTTGATACTCTAAATCGACGAACCTGCCTGCATTATGCTGCTTATTTTGGCCACTCTGATTGCTTAGAAGCTATTATTTCTGCTGCTCATTCAGCTCCTGTTGCAGCTACTTGGTTAGTTCTTATCCCCATAGATATTGATTTTTCGTGTTTTGATGCGTTATTTACATTGAATTGGATGTCGTCGACAGGGGGTTTATTAGATATGTGAATATTCGAGACGGAGGAGGTGCTACTCCGTTGCATATAGCTGCACGACAACAACAGCCACAGTGCATTCGGATACTTTTGGCGAATGGGGCTCTTGTTTGTGCTTCAACTTGTGCTTATGGGTAGATATTAAGCTGATTGTGATATTGATTGTGTTTGTATGAGCTGATGAGCTGATCTTTCATTACAATTTGCAGCTATCCTGGGAGTTCGCCTCTTCATCTAGCTGCTCGAAGTGGTTCGTTAGAATGCGTTCGAGAATTGCTTGCATGGGGAGCTGAAAGATTACAAGTGGATTCAGCTGGGTAAGCTCTAGCATGTTATATGAATCATGAACTTGTGGATCAAATATGATTATGAATACTCGATCTTAATTGCTCGAACTTGTTAATACATGTTTGTAGGAGAATACCTTACTCGATCGCTATAAAACGGAAGAATCGAGCGTGTGCAGCTTTGCTGAATCCTTCAGCAGCAGAGCCTCTTGTTTGGCCATCAAAATTGAAATTCATCAATGAGCTAAATGAAGAGGCAAAAGCTATGCTAGAGAGGGCCTTAGTGGAAGCAAACATGGAGAGGGAGAAGGCCATATTGAAGGAGAGTTCCTACTCATCTCCGTCTCCGTTACAATCCGATGTTGAGTTGGATGATGCAGAATCTGAGGTAATAACAGTTTTTCCGCTCGAACTTTCATGCTTTTGAGGTAATATTATTTAAGATCCCACCGCTAGAAGATATTGTCTTCTTTGGAATTTCCCTTTCGGGTTTCCTCTCATGGTTTTTAAAACGTGTCTGTTAGGGAGATGTTTTCACACCCTTATAAACAATGTTTCGTTCTCCTCCCCATCCGATATGGGATCTCACGATCCACCTCATTCAGGGCTAGTGTCCTTGCTAGCACTCGTTCCCTTCTCCAATCGGTGTGGGACCCCCTAATCTACTACTCTTCAGACCCAGTGTTCTTACTGGCATACCGCCTCGTGTACACCCCCCTAAGAGGCTTAGTCTCCTCGCTGACACATCGCCCGATGTCTGGCTCTGATACCATTTGTAACAATCCAAGCCCACCACTAACAGATATTGTCCTCTTTGGTCTTTCCCGCGAAGGTTTTTAAAATGCGTAAGCCAGGGAGATGTTTCCACACTCTTATAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATTTCATATGACTTTCATCGAGTGAAACATACTGATATAGTTTCCTCAAACTCAACATATTCTAATTCTTATTTGCTCATCGAAACTTTCAAACAGGGGTGCGACGTCGAGTTATGCTGCATATGCTTCGAACAGGCCTGTACTTTAGAGGTCCATCCATGTGGTCATCAAATGTGTGCCCATTGCACTCTAGCCTTATGCTGCTACAAGAAGCAAAACACCTCGAGCACGTGTCTTACCGCCCCGCTTTGCCCGTTTTGTCGAAGCAGCATTACTCAACTACTCGTGGCAAAGACCAAGGTGGCTGATAATCAAGAATCTGAAGTTAGTTCATCGAAACCAAGGCGGTCGAGGAAGTCGAATTTCAGTGAGGGTAGCAGTAGCTTCAAGAGCTTATCAGCCTTAGGTTCATTTGGGAAGATTGGTAGCCACAGTACAGGACGATTTTCGGTTGAATGTGGCGAGGACGTCGATAAGAGTTTCTAAGGTAGCATCTTCCGATCGGAATCTTCTTCGACGGTCGATGTAACAAAGTCTTGGATATGGTAGAATACCAATGGTTATGTTCACTACACGTATAAAATCTACTTGAACGTCTAAGAAGCACGGCGACAAGCGTGGTTCATACGATTCGATCGTCTTAAGTAAGTATAAGGTGGTCGAGTATGTCGTTACTGAGTCAGGTATGCTTGGTGAGTACTTTGTTATGTTTTTGAGTTGTAACAAAGCTTCATAAATTGGTCAATAATTAGCTGTTTCCTTTACCAAGATATTTATTTTAGGTCCCTCAAAAATCTTTCTTCCACTTTTCATTTTAGTCCCTAAATTCTTAAGAATTCAACTAAGTGCCCTTTTGACTTTTAAAATTTGAATTTTGTTTAAATATTTTTAGTTGTTAT
mRNA sequence
CACGGCAGTCGGATTCGTTGGGGAATGGGTCAGATTCCGACACCAATGGTCATAAATTTCACGCAATAAGGTCAAGCAGCCGAAGAAGGCCAACTCCTCCACGATTTTCTCCACAAGAAATTCCCCTTTCACATTAACTCTGGTCAGCCTCCGCAGGCGGTGGCGCGTGAATCAGTTGCTGGGTACTTCTACATGAACTGACGGCGTAACCCACCTGGAGAGCTGATGGGTCAAGGGCTGAGCTGCGGCGAACACCATGAAAATGGGCTATTCCGAGCTGTGCAAAATGGGGATTCGGAGCTCGTTCTGGCTATGCTGGAGGCTGATCCAACTATGATGGAACTCACCACTCCTCGTACTAAAATGTCTGTTCTTCACATCGCCGCTGCTTATGGTCAGATCGAGATTCTTAATATGCTCTTGGATCGGTCTGTGAATCCTGATGTGTTGAATCGCAATAAACAGACACCATTAATGCTGGCTACGATGAACGGGAAGATATCTTGTGTGCAGAGATTGATTGAAGCAGGAGCAAATATTTTGATGTTTGATACTCTAAATCGACGAACCTGCCTGCATTATGCTGCTTATTTTGGCCACTCTGATTGCTTAGAAGCTATTATTTCTGCTGCTCATTCAGCTCCTGTTGCAGCTACTTGGGGGTTTATTAGATATGTGAATATTCGAGACGGAGGAGGTGCTACTCCGTTGCATATAGCTGCACGACAACAACAGCCACAGTGCATTCGGATACTTTTGGCGAATGGGGCTCTTGTTTGTGCTTCAACTTGTGCTTATGGCTATCCTGGGAGTTCGCCTCTTCATCTAGCTGCTCGAAGTGGTTCGTTAGAATGCGTTCGAGAATTGCTTGCATGGGGAGCTGAAAGATTACAAGTGGATTCAGCTGGGAGAATACCTTACTCGATCGCTATAAAACGGAAGAATCGAGCGTGTGCAGCTTTGCTGAATCCTTCAGCAGCAGAGCCTCTTGTTTGGCCATCAAAATTGAAATTCATCAATGAGCTAAATGAAGAGGCAAAAGCTATGCTAGAGAGGGCCTTAGTGGAAGCAAACATGGAGAGGGAGAAGGCCATATTGAAGGAGAGTTCCTACTCATCTCCGTCTCCGTTACAATCCGATGTTGAGTTGGATGATGCAGAATCTGAGGGGTGCGACGTCGAGTTATGCTGCATATGCTTCGAACAGGCCTGTACTTTAGAGGTCCATCCATGTGGTCATCAAATGTGTGCCCATTGCACTCTAGCCTTATGCTGCTACAAGAAGCAAAACACCTCGAGCACGTGTCTTACCGCCCCGCTTTGCCCGTTTTGTCGAAGCAGCATTACTCAACTACTCGTGGCAAAGACCAAGGTGGCTGATAATCAAGAATCTGAAGTTAGTTCATCGAAACCAAGGCGGTCGAGGAAGTCGAATTTCAGTGAGGGTAGCAGTAGCTTCAAGAGCTTATCAGCCTTAGGTTCATTTGGGAAGATTGGTAGCCACAGTACAGGACGATTTTCGGTTGAATGTGGCGAGGACGTCGATAAGAGTTTCTAAGGTAGCATCTTCCGATCGGAATCTTCTTCGACGGTCGATGTAACAAAGTCTTGGATATGGTAGAATACCAATGGTTATGTTCACTACACGTATAAAATCTACTTGAACGTCTAAGAAGCACGGCGACAAGCGTGGTTCATACGATTCGATCGTCTTAAGTAAGTATAAGGTGGTCGAGTATGTCGTTACTGAGTCAGGTATGCTTGGTGAGTACTTTGTTATGTTTTTGAGTTGTAACAAAGCTTCATAAATTGGTCAATAATTAGCTGTTTCCTTTACCAAGATATTTATTTTAGGTCCCTCAAAAATCTTTCTTCCACTTTTCATTTTAGTCCCTAAATTCTTAAGAATTCAACTAAGTGCCCTTTTGACTTTTAAAATTTGAATTTTGTTTAAATATTTTTAGTTGTTAT
Coding sequence (CDS)
ATGGGTCAAGGGCTGAGCTGCGGCGAACACCATGAAAATGGGCTATTCCGAGCTGTGCAAAATGGGGATTCGGAGCTCGTTCTGGCTATGCTGGAGGCTGATCCAACTATGATGGAACTCACCACTCCTCGTACTAAAATGTCTGTTCTTCACATCGCCGCTGCTTATGGTCAGATCGAGATTCTTAATATGCTCTTGGATCGGTCTGTGAATCCTGATGTGTTGAATCGCAATAAACAGACACCATTAATGCTGGCTACGATGAACGGGAAGATATCTTGTGTGCAGAGATTGATTGAAGCAGGAGCAAATATTTTGATGTTTGATACTCTAAATCGACGAACCTGCCTGCATTATGCTGCTTATTTTGGCCACTCTGATTGCTTAGAAGCTATTATTTCTGCTGCTCATTCAGCTCCTGTTGCAGCTACTTGGGGGTTTATTAGATATGTGAATATTCGAGACGGAGGAGGTGCTACTCCGTTGCATATAGCTGCACGACAACAACAGCCACAGTGCATTCGGATACTTTTGGCGAATGGGGCTCTTGTTTGTGCTTCAACTTGTGCTTATGGCTATCCTGGGAGTTCGCCTCTTCATCTAGCTGCTCGAAGTGGTTCGTTAGAATGCGTTCGAGAATTGCTTGCATGGGGAGCTGAAAGATTACAAGTGGATTCAGCTGGGAGAATACCTTACTCGATCGCTATAAAACGGAAGAATCGAGCGTGTGCAGCTTTGCTGAATCCTTCAGCAGCAGAGCCTCTTGTTTGGCCATCAAAATTGAAATTCATCAATGAGCTAAATGAAGAGGCAAAAGCTATGCTAGAGAGGGCCTTAGTGGAAGCAAACATGGAGAGGGAGAAGGCCATATTGAAGGAGAGTTCCTACTCATCTCCGTCTCCGTTACAATCCGATGTTGAGTTGGATGATGCAGAATCTGAGGGGTGCGACGTCGAGTTATGCTGCATATGCTTCGAACAGGCCTGTACTTTAGAGGTCCATCCATGTGGTCATCAAATGTGTGCCCATTGCACTCTAGCCTTATGCTGCTACAAGAAGCAAAACACCTCGAGCACGTGTCTTACCGCCCCGCTTTGCCCGTTTTGTCGAAGCAGCATTACTCAACTACTCGTGGCAAAGACCAAGGTGGCTGATAATCAAGAATCTGAAGTTAGTTCATCGAAACCAAGGCGGTCGAGGAAGTCGAATTTCAGTGAGGGTAGCAGTAGCTTCAAGAGCTTATCAGCCTTAGGTTCATTTGGGAAGATTGGTAGCCACAGTACAGGACGATTTTCGGTTGAATGTGGCGAGGACGTCGATAAGAGTTTCTAA
Protein sequence
MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIEILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYAAYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILLANGALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIKRKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYSSPSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTSSTCLTAPLCPFCRSSITQLLVAKTKVADNQESEVSSSKPRRSRKSNFSEGSSSFKSLSALGSFGKIGSHSTGRFSVECGEDVDKSF
Homology
BLAST of CmaCh07G009800 vs. ExPASy Swiss-Prot
Match:
Q94B55 (Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=XBAT31 PE=2 SV=1)
HSP 1 Score: 535.4 bits (1378), Expect = 6.0e-151
Identity = 273/456 (59.87%), Postives = 350/456 (76.75%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
MGQ +SCG E+G+F +VQ GD + ++ +P+++ TTP + SVLH+AAA GQIE
Sbjct: 1 MGQSMSCGSRPEHGIFASVQCGDIITIRRVMATEPSLLNQTTPYDRHSVLHVAAANGQIE 60
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
IL++LL+R NPD+LNR+KQTPLMLA M G+ISCV++L E GANILMFD++NRRTCLHYA
Sbjct: 61 ILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYA 120
Query: 121 AYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILLAN 180
AY+GH++C++AI+SAA S+PVA WG+ R+VNIRD GATPLH+AARQ++P+C+ +LL +
Sbjct: 121 AYYGHANCVQAILSAAQSSPVAVHWGYARFVNIRDDKGATPLHLAARQRRPECVNVLLDS 180
Query: 181 GALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIKRKN 240
G+LVCAST YG PGS+PLHLAARSGS++CVR+LLAWGA+RLQ D++GRIPY +A+K K+
Sbjct: 181 GSLVCASTSVYGSPGSTPLHLAARSGSIDCVRKLLAWGADRLQRDASGRIPYVVAMKHKH 240
Query: 241 RACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYSSPS 300
AC ALLNPS+AEPLVWPS LKFI+ELN+EAK +LE+AL+EAN EREK ILK ++YS PS
Sbjct: 241 GACGALLNPSSAEPLVWPSPLKFISELNDEAKLLLEQALMEANREREKTILKGTAYSLPS 300
Query: 301 PLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTSSTC 360
P SD DD SE D ELCCICFEQ CT+EV CGHQMCA CTLALCC+ K N +++
Sbjct: 301 PSFSDT--DDNMSEVSDTELCCICFEQVCTIEVKDCGHQMCAQCTLALCCHNKPNPTTST 360
Query: 361 LTAPLCPFCRSSITQLLVAKTK--------------VADNQESEVSSSKPRRSRKS-NFS 420
+T P+CPFCRS+I L+VA+ V D + +VSSSK R+ R+S N
Sbjct: 361 VTPPVCPFCRSTIACLVVAQNNNNNNEKSKSLDDVVVVDREAGDVSSSKFRKHRRSINLG 420
Query: 421 EGSSSFKSLSALGSFGKIGSHSTGRFSVECGEDVDK 442
E SSSF LS +GSFG+I +GR + E E +DK
Sbjct: 421 EESSSFMGLSTIGSFGRITGRGSGRIAAE-NELMDK 453
BLAST of CmaCh07G009800 vs. ExPASy Swiss-Prot
Match:
Q65XV2 (E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 PE=1 SV=1)
HSP 1 Score: 504.2 bits (1297), Expect = 1.5e-141
Identity = 263/448 (58.71%), Postives = 340/448 (75.89%), Query Frame = 0
Query: 1 MGQGLSC---GEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYG 60
MG G+SC G+ H+ FRA Q GD + + A+L ADP++ T ++SVLHIAAA G
Sbjct: 1 MGHGVSCARTGDEHD--FFRAAQLGDLDALAALLAADPSLARRATLYDRLSVLHIAAANG 60
Query: 61 QIEILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCL 120
+IE+L+M LDR PD +NR+KQTPLMLA M+GKI CV +L++A ANILMFD+++ RTCL
Sbjct: 61 RIEVLSMFLDRGAPPDAVNRHKQTPLMLAAMHGKIDCVLKLLQADANILMFDSVHARTCL 120
Query: 121 HYAAYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRIL 180
H+AAY+GH DCL+AI++AA + PVA +WGF R+VN+RD GATPLH+AARQ +P C+++L
Sbjct: 121 HHAAYYGHVDCLQAILAAAQTTPVADSWGFARFVNVRDDHGATPLHLAARQGRPGCVQVL 180
Query: 181 LANGALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIK 240
L NGA+V A T +YG+PGS+ LHLAARSG+L+C+R+LLAWGA+RLQ DSAGRIPYS+A+K
Sbjct: 181 LENGAIVSALTGSYGFPGSTSLHLAARSGNLDCIRKLLAWGADRLQRDSAGRIPYSVALK 240
Query: 241 RKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYS 300
R + ACAALLNP++AEP+VWPS LKFI+EL EAKA+LE AL+EAN EREK IL + YS
Sbjct: 241 RNHGACAALLNPTSAEPMVWPSPLKFISELEPEAKALLEAALMEANREREKKILNGTKYS 300
Query: 301 SPSPLQSDVEL-DDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNT 360
PSP D DDA SE D ELCCICF+QACT+EV CGHQMCA CTLALCC+ K N
Sbjct: 301 LPSPSPGDDSADDDACSEVSDTELCCICFDQACTIEVQDCGHQMCAPCTLALCCHNKPNP 360
Query: 361 SSTCLTAPLCPFCRSSITQLLVAKTKVA--DNQESEVSSSKPRRSRKSNFSEGSSSFKSL 420
++ +P CPFCR SI++L+VA+T+ A ++ S + ++ R R N SEGSSSFK L
Sbjct: 361 TTLTPPSPACPFCRGSISRLVVAQTRSACDPDKPSSLQLTRKRSRRSHNLSEGSSSFKGL 420
Query: 421 -SALGSFGKIGSHSTGRFSVECGEDVDK 442
SA+GSF K+G S+ R + ++DK
Sbjct: 421 PSAMGSFSKLGRGSS-RMADSDSSNLDK 445
BLAST of CmaCh07G009800 vs. ExPASy Swiss-Prot
Match:
Q94CT7 (Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS31 PE=2 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 1.2e-122
Identity = 241/447 (53.91%), Postives = 313/447 (70.02%), Query Frame = 0
Query: 1 MGQGLSCG-EHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQI 60
MG GLSC + E LFRA Q GD + A+L ADP + T + + LHIAAA G++
Sbjct: 1 MGHGLSCSRDTDEYDLFRAAQLGDIHALSALLAADPALARRATVYDRFTALHIAAANGRL 60
Query: 61 EILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHY 120
++L+MLLDR + DVL+R KQTPLM+A M G CV RL+ GAN+L FD+ RTCLH+
Sbjct: 61 QVLSMLLDRDGDVDVLSRKKQTPLMVAAMRGNTECVVRLLRGGANVLTFDSPRARTCLHH 120
Query: 121 AAYFGHSDCLEAIISAAHSA--PVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRIL 180
AAY+GH++CL+AI+ AA A PVAA+WGF R+VN+RD GATPLH+AAR + C+R+L
Sbjct: 121 AAYYGHAECLQAILGAAAQAQGPVAASWGFARFVNVRDERGATPLHLAARHARASCVRLL 180
Query: 181 LANGALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIK 240
L GA+V A T YG+PGS+ LHLAAR+GS+EC+RELLAWGA+RLQ DSAGRI Y++A++
Sbjct: 181 LDKGAIVSAPTAVYGFPGSTALHLAARAGSMECIRELLAWGADRLQRDSAGRIAYAVAMR 240
Query: 241 RKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYS 300
R +RACAALLNP+AAEP+VWPS LKFI EL +AKA+LE AL+EAN EREK IL +
Sbjct: 241 RGHRACAALLNPAAAEPIVWPSPLKFIGELEADAKALLEAALMEANREREKRIL----HG 300
Query: 301 SPSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTS 360
S ++ E +++E E E C ICFEQAC++EV CGHQMCA CTLA+CC+ K N
Sbjct: 301 SDINIKGGDEEEESEDE---EEACNICFEQACSMEVKECGHQMCAACTLAICCHSKPNPK 360
Query: 361 STCLTAPLCPFCRSSITQLLVAKTKVADNQESEVSSSKPRRSRKSNFSEGSSSFKSLSAL 420
+ L P CPFCR++I++L+VA T ++ +S + RSR S+F G S SA+
Sbjct: 361 TLLLHPPACPFCRTTISRLVVATT-----NSNKTNSRRRSRSRSSSFKGGLS-----SAM 420
Query: 421 GSFGKIGSHSTGRFSVE---CGEDVDK 442
GSF +IG +GR V+ GE DK
Sbjct: 421 GSFSRIG-RGSGRLVVDGSSVGELADK 429
BLAST of CmaCh07G009800 vs. ExPASy Swiss-Prot
Match:
Q4JHE0 (Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 4.3e-32
Identity = 126/432 (29.17%), Postives = 190/432 (43.98%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
MG L C E L A ++GD+ +L A+P + TT S LH+AAA G E
Sbjct: 1 MGNSLGCVGLGER-LAAAAKDGDAAEAQRLLAANPGLARCTTFGNLNSPLHVAAAKGHHE 60
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
I +LL+ + + N QTPLM A G VQ L+ N+ + L+ RT LH A
Sbjct: 61 IAALLLENGADVNARNIYGQTPLMQACRFGHWEVVQTLLVFRCNVWRVENLSGRTALHMA 120
Query: 121 AYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILLAN 180
A GH C+ +++ A YVN GG T LH+AA +C+ +L+
Sbjct: 121 AAGGHVKCVRLLVADAAGDRDG-------YVNKAANGGVTALHLAALHGHVECVHLLIDE 180
Query: 181 GALVCASTCAYGYP-------GSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYS 240
A + A T P GS+PLH AA G ++C + L++ GA+R ++ G +P
Sbjct: 181 RASLAAQTLPCAAPPMASIGAGSTPLHYAACGGEVKCCQILVSRGADRTAINCNGWLPID 240
Query: 241 IAIKRKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKE 300
A +L+P + P+ K L++ +++ AI +E
Sbjct: 241 AARIWGCNWLEHVLSPKSHLPI---PKFPPSGYLSQPLPSLI-------------AIARE 300
Query: 301 SSYSSPSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKK 360
+ S E+ D EG D C +C E+ CT+ C H++C C + LC K
Sbjct: 301 QGLNLSS------EVSDGFDEGADA--CAVCLERPCTVAAEGCDHELCVKCAMDLCSVIK 360
Query: 361 QNTSSTCLTAPLCPFCRSSITQLLVAKTKVADNQESEVSSSKPRRSRKSNFSEGSSSFKS 420
S+ CP CR+ I +T A S ++ S RRSR++N G ++
Sbjct: 361 SYDSAGIAGEIPCPLCRTGIASF---RTTAAPPPPS-LAGSPARRSRRNNSGGGGGEHEA 396
Query: 421 LSALGSFGKIGS 426
++ GS GS
Sbjct: 421 SNSGGSEKGYGS 396
BLAST of CmaCh07G009800 vs. ExPASy Swiss-Prot
Match:
Q337A0 (Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS33 PE=2 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 4.8e-31
Identity = 120/414 (28.99%), Postives = 183/414 (44.20%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
MG L C E L A ++GD+ +LE P + +T S LH AAA G ++
Sbjct: 1 MGNSLGCSASGER-LVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLD 60
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
I+ +LL++ + +V N QT LM A +G VQ L+ N+ D L+ RT LH+A
Sbjct: 61 IVTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFA 120
Query: 121 AYFGHSDCLEAIIS-AAHSAPV---------------------AATWGF-------IRYV 180
A+ G C+ +++ SAP+ ++ G +RY+
Sbjct: 121 AHDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYI 180
Query: 181 NIRDGGGATPLHIAARQQQPQCIRILLANGALVCASTCAYGY------PGSSPLHLAARS 240
N GG T LH+AA C+++L+ GA V A T YG GS+PLH AA
Sbjct: 181 NKPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGAGSTPLHYAAGG 240
Query: 241 GSLECVRELLAWGAERLQVDSAGRIPYSIAIKRKNRACAALLNP--SAAEPLVWPSK--- 300
G+ EC + LL+ GA +L ++ G +P +A R LL+P +++ P PS
Sbjct: 241 GNAECCQLLLSKGASKLTLNCNGWLPIDVARMFGRRFLEPLLSPNSNSSIPAYQPSNYLA 300
Query: 301 LKFINELNEEAKAMLERALVEANMEREKAILKESSYSSPSPLQSDVELDDAESEGCDVEL 360
L F++ L N+ RE + L + +DD+ +L
Sbjct: 301 LPFMSIL---------------NIAREFGL-----------LHTVASVDDS-------DL 360
Query: 361 CCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTSSTCLTAPL-CPFCRSSI 374
C +C E++C++ C H+ C C L LC T + CP CR+ I
Sbjct: 361 CAVCLERSCSVAAEGCCHEFCIKCALYLCSTSNTRVEFTGPPGSIPCPLCRNGI 380
BLAST of CmaCh07G009800 vs. TAIR 10
Match:
AT2G28840.1 (XB3 ortholog 1 in Arabidopsis thaliana )
HSP 1 Score: 535.4 bits (1378), Expect = 4.3e-152
Identity = 273/456 (59.87%), Postives = 350/456 (76.75%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
MGQ +SCG E+G+F +VQ GD + ++ +P+++ TTP + SVLH+AAA GQIE
Sbjct: 1 MGQSMSCGSRPEHGIFASVQCGDIITIRRVMATEPSLLNQTTPYDRHSVLHVAAANGQIE 60
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
IL++LL+R NPD+LNR+KQTPLMLA M G+ISCV++L E GANILMFD++NRRTCLHYA
Sbjct: 61 ILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYA 120
Query: 121 AYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILLAN 180
AY+GH++C++AI+SAA S+PVA WG+ R+VNIRD GATPLH+AARQ++P+C+ +LL +
Sbjct: 121 AYYGHANCVQAILSAAQSSPVAVHWGYARFVNIRDDKGATPLHLAARQRRPECVNVLLDS 180
Query: 181 GALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIKRKN 240
G+LVCAST YG PGS+PLHLAARSGS++CVR+LLAWGA+RLQ D++GRIPY +A+K K+
Sbjct: 181 GSLVCASTSVYGSPGSTPLHLAARSGSIDCVRKLLAWGADRLQRDASGRIPYVVAMKHKH 240
Query: 241 RACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYSSPS 300
AC ALLNPS+AEPLVWPS LKFI+ELN+EAK +LE+AL+EAN EREK ILK ++YS PS
Sbjct: 241 GACGALLNPSSAEPLVWPSPLKFISELNDEAKLLLEQALMEANREREKTILKGTAYSLPS 300
Query: 301 PLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTSSTC 360
P SD DD SE D ELCCICFEQ CT+EV CGHQMCA CTLALCC+ K N +++
Sbjct: 301 PSFSDT--DDNMSEVSDTELCCICFEQVCTIEVKDCGHQMCAQCTLALCCHNKPNPTTST 360
Query: 361 LTAPLCPFCRSSITQLLVAKTK--------------VADNQESEVSSSKPRRSRKS-NFS 420
+T P+CPFCRS+I L+VA+ V D + +VSSSK R+ R+S N
Sbjct: 361 VTPPVCPFCRSTIACLVVAQNNNNNNEKSKSLDDVVVVDREAGDVSSSKFRKHRRSINLG 420
Query: 421 EGSSSFKSLSALGSFGKIGSHSTGRFSVECGEDVDK 442
E SSSF LS +GSFG+I +GR + E E +DK
Sbjct: 421 EESSSFMGLSTIGSFGRITGRGSGRIAAE-NELMDK 453
BLAST of CmaCh07G009800 vs. TAIR 10
Match:
AT2G28840.2 (XB3 ortholog 1 in Arabidopsis thaliana )
HSP 1 Score: 479.6 bits (1233), Expect = 2.8e-135
Identity = 245/398 (61.56%), Postives = 311/398 (78.14%), Query Frame = 0
Query: 59 IEILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLH 118
++IL++LL+R NPD+LNR+KQTPLMLA M G+ISCV++L E GANILMFD++NRRTCLH
Sbjct: 45 LQILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLH 104
Query: 119 YAAYFGHSDCLEAIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILL 178
YAAY+GH++C++AI+SAA S+PVA WG+ R+VNIRD GATPLH+AARQ++P+C+ +LL
Sbjct: 105 YAAYYGHANCVQAILSAAQSSPVAVHWGYARFVNIRDDKGATPLHLAARQRRPECVNVLL 164
Query: 179 ANGALVCASTCAYGYPGSSPLHLAARSGSLECVRELLAWGAERLQVDSAGRIPYSIAIKR 238
+G+LVCAST YG PGS+PLHLAARSGS++CVR+LLAWGA+RLQ D++GRIPY +A+K
Sbjct: 165 DSGSLVCASTSVYGSPGSTPLHLAARSGSIDCVRKLLAWGADRLQRDASGRIPYVVAMKH 224
Query: 239 KNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERALVEANMEREKAILKESSYSS 298
K+ AC ALLNPS+AEPLVWPS LKFI+ELN+EAK +LE+AL+EAN EREK ILK ++YS
Sbjct: 225 KHGACGALLNPSSAEPLVWPSPLKFISELNDEAKLLLEQALMEANREREKTILKGTAYSL 284
Query: 299 PSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQMCAHCTLALCCYKKQNTSS 358
PSP SD DD SE D ELCCICFEQ CT+EV CGHQMCA CTLALCC+ K N ++
Sbjct: 285 PSPSFSDT--DDNMSEVSDTELCCICFEQVCTIEVKDCGHQMCAQCTLALCCHNKPNPTT 344
Query: 359 TCLTAPLCPFCRSSITQLLVAKTK--------------VADNQESEVSSSKPRRSRKS-N 418
+ +T P+CPFCRS+I L+VA+ V D + +VSSSK R+ R+S N
Sbjct: 345 STVTPPVCPFCRSTIACLVVAQNNNNNNEKSKSLDDVVVVDREAGDVSSSKFRKHRRSIN 404
Query: 419 FSEGSSSFKSLSALGSFGKIGSHSTGRFSVECGEDVDK 442
E SSSF LS +GSFG+I +GR + E E +DK
Sbjct: 405 LGEESSSFMGLSTIGSFGRITGRGSGRIAAE-NELMDK 439
BLAST of CmaCh07G009800 vs. TAIR 10
Match:
AT5G07270.1 (XB3 ortholog 3 in Arabidopsis thaliana )
HSP 1 Score: 134.8 bits (338), Expect = 1.7e-31
Identity = 119/398 (29.90%), Postives = 175/398 (43.97%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
MG C E L A ++GD +L+ +P + + +T S LH AAA G E
Sbjct: 1 MGNSFGCSASGER-LVSAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNE 60
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
I+ +LL+ + + N QT LM A G VQ L+ N+ D L RT LH+A
Sbjct: 61 IVGLLLENGADVNSRNYCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLAGRTALHFA 120
Query: 121 AYFGHSDCLEAII----------SAAHSAPVAA-----TWGFIRYVNIRDGGGATPLHIA 180
A GH+ C+ ++ S + V A ++VN GG T LH+A
Sbjct: 121 AVNGHARCIRLVLADFLPSDKLNSLPETGVVTAKNKSEQSALSKFVNKAADGGITALHMA 180
Query: 181 ARQQQPQCIRILLANGALVCASTCAYGY------PGSSPLHLAARSGSLECVRELLAWGA 240
A C+++LL A V A T YG GS+PLH AA G+L+C + LLA GA
Sbjct: 181 ALNGLFDCVQLLLDLEANVSAVTFHYGTSMDMIGAGSTPLHYAACGGNLKCCQILLARGA 240
Query: 241 ERLQVDSAGRIPYSIAIKRKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERAL 300
++ ++ G +P IA LL+P++ +V P+ N L+ ++L
Sbjct: 241 RKMTLNCNGWLPIDIARMWSRHWLEPLLSPNS--DVVIPA-FPHSNYLSLPLLSIL---- 300
Query: 301 VEANMEREKAILKESSYSSPSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGHQ 360
N+ RE + + + G +V++C +C E+ CT+ C HQ
Sbjct: 301 ---NIAREFGL-------------------QSATIGDEVDICAVCLERTCTVAAEGCEHQ 360
Query: 361 MCAHCTLALCCYKKQNTSSTCLTAP---LCPFCRSSIT 375
+C C L LC N S + P CP CR IT
Sbjct: 361 LCVRCALYLC--SSSNVPSVTVGPPGSIPCPLCRHGIT 366
BLAST of CmaCh07G009800 vs. TAIR 10
Match:
AT5G57740.1 (XB3 ortholog 2 in Arabidopsis thaliana )
HSP 1 Score: 117.1 bits (292), Expect = 3.6e-26
Identity = 116/433 (26.79%), Postives = 182/433 (42.03%), Query Frame = 0
Query: 1 MGQGLSCGEHHENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIE 60
+G C E L A ++GD + A+L+ +P + +T + S LH +AA G E
Sbjct: 7 VGNSFGCSASGER-LVSAARDGDLQEAKALLDYNPRLARYSTFGVRNSPLHYSAAQGHHE 66
Query: 61 ILNMLLDRSVNPDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYA 120
I+++L++ V+ ++ N QT LM A +G V LI GANI D LN T LH A
Sbjct: 67 IVSLLVESGVDINLRNYRGQTALMQACQHGHWEVVLILILFGANIHRSDYLNGGTALHLA 126
Query: 121 AYFGHSDCLEAIISAAHSAPVAATWGFIR----------------YVNIRDGGGATPLHI 180
A GH C+ ++S + V W ++ +N GG TPLH+
Sbjct: 127 ALNGHPRCIRILLS-EYIPSVPNCWSLLKNKKTSVAGFDSSVLHEVINRAADGGITPLHV 186
Query: 181 AARQQQPQCIRILLANGALVCASTCAYGY------PGSSPLHLAARSGSLECVRELLAWG 240
AA + +++LL GA V T G GS+ LH A+ G+ +C + L++ G
Sbjct: 187 AALNGHIETVQLLLDLGASVTQVTVEDGTTIDLIGAGSTALHYASCGGNTQCCQLLISKG 246
Query: 241 AERLQVDSAGRIPYSIAIKRKNRACAALLNPSAAEPLVWPSKLKFINELNEEAKAMLERA 300
A V+S G P +A +LNP+ +P + L L
Sbjct: 247 ACLAAVNSNGWTPMMVARSWHRNWLEEILNPTTEQPQL---------HLPNVPSPFLCLP 306
Query: 301 LVEANMEREKAILKESSYSSPSPLQSDVELDDAESEGCDVELCCICFEQACTLEVHPCGH 360
L+ ++ +E+ +P + C +C E+ CT+ C H
Sbjct: 307 LMSIVNIAQECGWRENDCLTPCR-----------------DPCAVCLERKCTVAADGCAH 366
Query: 361 QMCAHCTLAL--CCYKKQNTSSTCLTAPLCPFCRSSITQLLVAKTKVADNQESEVSSSKP 410
+ C +C L L TS+ + CP CR+ I V+ TK+ + +S+
Sbjct: 367 EFCTNCALYLSTTSITSSKTSNVTPGSVPCPLCRNGI----VSFTKLPHTTATTRTSTSS 407
BLAST of CmaCh07G009800 vs. TAIR 10
Match:
AT2G31820.1 (Ankyrin repeat family protein )
HSP 1 Score: 75.9 bits (185), Expect = 9.3e-14
Identity = 66/243 (27.16%), Postives = 106/243 (43.62%), Query Frame = 0
Query: 12 ENGLFRAVQNGDSELVLAMLEADPTMMELTTPRTKMSVLHIAAAYGQIEILNMLLDRSVN 71
E L+ A +NG S +V ML+ R H+AA G +E+L +LL+ N
Sbjct: 190 ETPLYTAAENGHSIVVEEMLKHMDLETASIAARNGFDPFHVAAKQGHLEVLKILLETFPN 249
Query: 72 -PDVLNRNKQTPLMLATMNGKISCVQRLIEAGANILMFDTLNRRTCLHYAAYFGHSDCLE 131
+ + T L A G I V L+E +N+ N +T LH AA GH + ++
Sbjct: 250 LAMTTDLSCTTALHTAATQGHIDVVNLLLETDSNLAKIAKNNGKTALHSAARMGHVEVVK 309
Query: 132 AIISAAHSAPVAATWGFIRYVNIRDGGGATPLHIAARQQQPQCIRILLANGALVCASTCA 191
++I S GF D G T LH+A + Q + L+ V +
Sbjct: 310 SLIGKDPSI------GF-----RTDKKGQTALHMAVKGQNDGIVVELVKPDVAVLS---V 369
Query: 192 YGYPGSSPLHLAARSGSLECVRELLAW-GAERLQVDSAGRIPYSIAIKRKNRACAALLNP 251
G++PLH+A G ++ VR L+++ G ++ AG P ++ K N ++L
Sbjct: 370 EDNKGNTPLHIATNKGRIKIVRCLVSFEGINLNPINKAGDTPLDVSEKIGNAELVSVLKE 418
Query: 252 SAA 253
+ A
Sbjct: 430 AGA 418
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94B55 | 6.0e-151 | 59.87 | Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=X... | [more] |
Q65XV2 | 1.5e-141 | 58.71 | E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 ... | [more] |
Q94CT7 | 1.2e-122 | 53.91 | Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica OX=3... | [more] |
Q4JHE0 | 4.3e-32 | 29.17 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=3... | [more] |
Q337A0 | 4.8e-31 | 28.99 | Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica OX=3... | [more] |