CmaCh07G009510 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G009510
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTransmembrane protein, putative
LocationCma_Chr07: 4574028 .. 4578118 (+)
RNA-Seq ExpressionCmaCh07G009510
SyntenyCmaCh07G009510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGCAAATCGCAATCGGTTGCTGTGCAAAACCCAGCCTTCCAGATTACGCCACGCAACCACCATCACCCGATGACGTGGATATCACAACACGTGGCAAAGATTTGGGCAGACTAACAGTTTACCATTGGTGTAAGCGTATCACAAACGCAAGACCCCAAATCCCTTCATTACCCCACTGGTTTGTTCGCACGCCAAGGACCCAAATCGTCATACCCTCGAAGCTTCCGTTTGATTGAATCGGAGGTAAAACAAGTCGGCCACCGCCTTCTCCGTCGCCGGATAACTCATTGATCCCGTCGCTCTAACAGCAATCCGATATTCGTGATTATGGTTTTCTGAATTTGATTCAGGCGAGTTGCGTATAGGGTTTTGATTAATTCGCGATATGCCGATTCGGCGTAGTACGAGTTTCGAAGTTTTGACGGTTTTTCTTCTTGTTTCGGTATCTCTGAGCTGCTGTTCAGGTAAAATTTAATCGAATAGATGTGAGATTGTTGTTTTTGCTTTGATTTGGTTTCTGTGTAAATTGTTATTTGGCATTTTGTAGTCGGGGTTTGAATATTGGAAATGTTTTTCAGAGGGCGAAGAATCGGCGGTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAATGGTTAGCTTCGAAACCGACTGTTTATTTTAAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGTGCATGTTCTATACAGCTTCAATGGTGAAGAATCTTGGCAGGTTTGTGGTCTCTCATTGAGTTGTTTTGAATAATGTTAAAGCTTTTCCAACTTTGCTTTTCCTTCTTTTCATGCCTGACTTTATTGGATGTTGTAATTTCACTCACGTTTGATAATCATTTGATTTTAGGTTTAAGCTTACATAGGTTTGAAGGCTAAAGAAAGTCATTTTCAAGAAAACTTAGTTTTTGTTTTTGAATTTGGATAAGAATCCAAATATATCAGTCAAAAAAGACGAATTATCGAAAAAAAATTGAGACAAAACAAGCCTAGTTTTCATAAACAAAAAACCAAATAGTTATCGAATGGGGTAGGTCAAATTTTAACGACAAAAAGAACACACACTGGTGGAAACTTTAGTGTCTTGATTGTTTGCTTCTAATTATGTAATGATTAAAGTTCTTCATACAAATTGGAAAGTAACATACCATTAGGAGATTTAAATATGACAATTGTAACTTTTCTATCTCATTCAAAACAAAAACCTTTTGAACTTTTTGTTGCAAGAAACATAGTTTAATTAAGAGTTCTGTTTTGGTTAAAAAGCGCATATTTCCTCTTTCATTTATCTCAACTGAGGAAAGGGATTGCATTGCATACACAGTAACAAATGGCACTGTTTACTATTGTTGTTTTGGTTCCAATGTCGAAATACTATCTCTGTGCTTTCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAGGAGGACAGCATTAAATCTGATGATGTATTTGAAGAATGGGAGTTATGTCCATCTGATTTTACCGCACCTGATGGGGAATATGTTCGATACAACAAAAAAGAGTTCAATGCCACTTTTCTGTGCTTGGAGTGCACAGCTTATTCCAATGGTTAGTAATATTCCATAGTTTATGACTCTTCTTTTAGTTGAATTAATGTGGCCTTCATACAGCAATTATGTAGAAGGTTTCAACTGTATATGGTTTGAGTAATTGTTGAGTTTTAAATTACTGAATAAATCAGTTCCCTTCTAGATGTGAATGATCATATTGCTTTCCTCCACTAATGGTGGTTCCCTCAGCATGTGAAGAAAAAGGAAATCATCTTATTGATTCACTCTCTTAGATATTTTAGTTGTTTGTCATGGAAACTTTTGAGTTTGAAGATAAACACGATTCGTGAACATATAGATATAAGCTTTGTTGTTCTTAGTATCCTTGAAGTTCTGTATCACTTTTTCTTTCCTTACCTTCCGCCTCTTTTAGTGTAATAGCTCAAGCCCACCACTAGCAGATATTGTCTTATTTGGACTTTCCCTTCCGGACTTCCCCTCAAGGTTTTAAAATGCGTCCACTAGGGAGAGGTTTCTACACCCTATAAGAAATGCTTCATTCTCCTCTCCAACCGATGTGAGATCTCACATTTAGTTAAGATGAATGCAACCATATAAAACCTTAATCCACTCCTTTTGAGGGAACACCTCGTAACATTTTTCATTTTGGAAACTTTGAAGCCTTCAACAGGATTCTAAATGAAGTATGAGCGCTCGATAGAAAATTAATGTAATAATAATAAAAAGAAAAAAACTCTCCGAAGATCCTTTAGAATTTTAGTTAATTATGCATGGCATAATCAATGAACGTGCACTCATGCTTCCTGCCTGCTTCTCAATTATTTTAAACAAGTCTGTGACCATGACTCTGTTGACTTGTCCATGTGTTTTTGAAGAATTACAATCTGCATTTAAGAATTTGTCAAATTGATACTTGCAGTTACCAGTTCAAGCTCACATTCACACGATACAGAAAAGGGAATGCATGCTGCTGCAATCATACTTATCAGTGTTATAGTTTCAACTGTGTTAATTATTGGTATGGTGATAGGATACAAGTATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGATTCCTGAAGCTGTTTGAAGATGGGGATGACATCGAGGATGAATTGGGCCTTAACGATGTAATTTAAGAAGATTTGGTACACATCAAGAAAGAGAAATACATGTACAGATACTCATTTTGCATAATATTCTTTTATTACCTTCGGGTTAGAATAGAAATATCATGAAATTTCTGCTTTGTTCATTGATCATAGGAAGAACATCCATTCGAAGAGATATATGTAGGGGGCTAGAGGGAGAGCGACCATAGGGAATCCTGAGTTTTGCTTACTTTGGTGTAATAGAATAGGGAAAACTTCTTATTTCTTCTGGTAAAAAATAGTTGAAAACAAAAAAAGAACTCTGATTACATTGCATTCAGCCAATTGTTGTCTAGTTTCATGACCAATACCCCAGGATGGATTCTAGGAGGGCCACAGCCTCAGAACTGCAGTCTTGTTCTAGTCTCAATTCCTGTCCATTACAGTCCTGTTCATCTTCTCCAAGTCCAAACCAAGATCGAAAACAAGCCCAATCAAATTCATAGTATAGGTTTCTAGGATCACCAGTATAATCCTCAGTTTGATCCTCATTGTGGAAGAGAATCAGTTCTCTATTCTCCATTGTGCAGCCACTTTGATTGTCATGAGGGTCTTGGCCATTGAAGATGAGATCCGAGGAGTTGAGTTCATTCTGCGAATTCTCGAAACAACTGAGGTTAGTCCGCTCACCCTCGGGATCATCTTCAATTGGGTCTCCATCAGAAAACTGGTGTTGGCCTGTAAAACCAGTCCAAAATGGAGAGGGGCTCCTACCGGGGTAGTCGTAGCTGTTTGCATTGGCCATGAGCAGGCCAATGGAGTTAGAGCCACTGCAATTCATAACAGATGCTCAATAGTTGTGTCCTGGGGGATCAAAGTGTTGGTAGTATGCCCTGTTATATAAACTTGAAAAAGGATAAGAAAACACCATATTTAGCAACATTTTTAGCTTTTGAGTAAGAGAATATTCTGAACAGCTTTCCTGGAGGGGATGAAAAGCAGCAAAAAGAAGAGAAAAAGAAAGGCATCATCACCAGATTAGTTGCCAAAGCATCTTTATCAAATTTCTTTCCTCCACAGTGAACAAACAAGAAGCCGAATAAGAATCCTTTTCCTCTTTGCTTTCAGGCAAGAGATATGCCTTGCTCAGACCGTCGGCGTAGTGGCTAACATGTGCTACACACCATTGCTCTTATCTTCTGAGGTACATGCCAATGAAGGCACTCTTTCAGTCCCTGGACATGCAATTCACTAATGATGTTAGTACAACATTTTTAAAAAGACACGTCCATAGACTTTAGTTTGTGTTGTTACCAAATTCTGGACAGAAATATATTTGTTCTTAACGTGAAAACAATGTAAATTTAGTTCGTAAACTTTATCGTGTGTTGTTACCAAATTCTGGAC

mRNA sequence

ACGGCAAATCGCAATCGGTTGCTGTGCAAAACCCAGCCTTCCAGATTACGCCACGCAACCACCATCACCCGATGACGTGGATATCACAACACGTGGCAAAGATTTGGGCAGACTAACAGTTTACCATTGGTGTAAGCGTATCACAAACGCAAGACCCCAAATCCCTTCATTACCCCACTGGTTTGTTCGCACGCCAAGGACCCAAATCGTCATACCCTCGAAGCTTCCGTTTGATTGAATCGGAGGTAAAACAAGTCGGCCACCGCCTTCTCCGTCGCCGGATAACTCATTGATCCCGTCGCTCTAACAGCAATCCGATATTCGTGATTATGGTTTTCTGAATTTGATTCAGGCGAGTTGCGTATAGGGTTTTGATTAATTCGCGATATGCCGATTCGGCGTAGTACGAGTTTCGAAGTTTTGACGGTTTTTCTTCTTGTTTCGGTATCTCTGAGCTGCTGTTCAGAGGGCGAAGAATCGGCGGTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAATGGTTAGCTTCGAAACCGACTGTTTATTTTAAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGTGCATGTTCTATACAGCTTCAATGGTGAAGAATCTTGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAGGAGGACAGCATTAAATCTGATGATGTATTTGAAGAATGGGAGTTATGTCCATCTGATTTTACCGCACCTGATGGGGAATATGTTCGATACAACAAAAAAGAGTTCAATGCCACTTTTCTGTGCTTGGAGTGCACAGCTTATTCCAATGTTACCAGTTCAAGCTCACATTCACACGATACAGAAAAGGGAATGCATGCTGCTGCAATCATACTTATCAGTGTTATAGTTTCAACTGTGTTAATTATTGGTATGGTGATAGGATACAAGTATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGATTCCTGAAGCTGTTTGAAGATGGGGATGACATCGAGGATGAATTGGGCCTTAACGATGTAATTTAAGAAGATTTGGTACACATCAAGAAAGAGAAATACATGTACAGATACTCATTTTGCATAATATTCTTTTATTACCTTCGGGTTAGAATAGAAATATCATGAAATTTCTGCTTTGTTCATTGATCATAGGAAGAACATCCATTCGAAGAGATATATGTAGGGGGCTAGAGGGAGAGCGACCATAGGGAATCCTGAGTTTTGCTTACTTTGGTGTAATAGAATAGGGAAAACTTCTTATTTCTTCTGGTAAAAAATAGTTGAAAACAAAAAAAGAACTCTGATTACATTGCATTCAGCCAATTGTTGTCTAGTTTCATGACCAATACCCCAGGATGGATTCTAGGAGGGCCACAGCCTCAGAACTGCAGTCTTGTTCTAGTCTCAATTCCTGTCCATTACAGTCCTGTTCATCTTCTCCAAGTCCAAACCAAGATCGAAAACAAGCCCAATCAAATTCATAGTATAGGTTTCTAGGATCACCAGTATAATCCTCAGTTTGATCCTCATTGTGGAAGAGAATCAGTTCTCTATTCTCCATTGTGCAGCCACTTTGATTGTCATGAGGGTCTTGGCCATTGAAGATGAGATCCGAGGAGTTGAGTTCATTCTGCGAATTCTCGAAACAACTGAGGTTAGTCCGCTCACCCTCGGGATCATCTTCAATTGGGTCTCCATCAGAAAACTGGTGTTGGCCTGTAAAACCAGTCCAAAATGGAGAGGGGCTCCTACCGGGGTAGTCGTAGCTGTTTGCATTGGCCATGAGCAGGCCAATGGAGTTAGAGCCACTGCAATTCATAACAGATGCTCAATAGTTGTGTCCTGGGGGATCAAAGTGTTGGTAGTATGCCCTGTTATATAAACTTGAAAAAGGATAAGAAAACACCATATTTAGCAACATTTTTAGCTTTTGAGTAAGAGAATATTCTGAACAGCTTTCCTGGAGGGGATGAAAAGCAGCAAAAAGAAGAGAAAAAGAAAGGCATCATCACCAGATTAGTTGCCAAAGCATCTTTATCAAATTTCTTTCCTCCACAGTGAACAAACAAGAAGCCGAATAAGAATCCTTTTCCTCTTTGCTTTCAGGCAAGAGATATGCCTTGCTCAGACCGTCGGCGTAGTGGCTAACATGTGCTACACACCATTGCTCTTATCTTCTGAGGTACATGCCAATGAAGGCACTCTTTCAGTCCCTGGACATGCAATTCACTAATGATGTTAGTACAACATTTTTAAAAAGACACGTCCATAGACTTTAGTTTGTGTTGTTACCAAATTCTGGACAGAAATATATTTGTTCTTAACGTGAAAACAATGTAAATTTAGTTCGTAAACTTTATCGTGTGTTGTTACCAAATTCTGGAC

Coding sequence (CDS)

ATGCCGATTCGGCGTAGTACGAGTTTCGAAGTTTTGACGGTTTTTCTTCTTGTTTCGGTATCTCTGAGCTGCTGTTCAGAGGGCGAAGAATCGGCGGTTGTTACGCTTGATTCCATCGTAATATACAAGACGCACGAATGGTTAGCTTCGAAACCGACTGTTTATTTTAAATGTCAAGGGGGAAATAAGACGAAATTGCCTGATGTACAGAAAGTGCATGTTCTATACAGCTTCAATGGTGAAGAATCTTGGCAGCCATTGACTGAATTTAAAAGCAAAAAGTGTAAGCGATGTGGGTTCTATGAGGAGGACAGCATTAAATCTGATGATGTATTTGAAGAATGGGAGTTATGTCCATCTGATTTTACCGCACCTGATGGGGAATATGTTCGATACAACAAAAAAGAGTTCAATGCCACTTTTCTGTGCTTGGAGTGCACAGCTTATTCCAATGTTACCAGTTCAAGCTCACATTCACACGATACAGAAAAGGGAATGCATGCTGCTGCAATCATACTTATCAGTGTTATAGTTTCAACTGTGTTAATTATTGGTATGGTGATAGGATACAAGTATTGGCAAAAAAAGAGAAGAGAGCAAGATCAGGCCAGATTCCTGAAGCTGTTTGAAGATGGGGATGACATCGAGGATGAATTGGGCCTTAACGATGTAATTTAA

Protein sequence

MPIRRSTSFEVLTVFLLVSVSLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKVHVLYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLECTAYSNVTSSSSHSHDTEKGMHAAAIILISVIVSTVLIIGMVIGYKYWQKKRREQDQARFLKLFEDGDDIEDELGLNDVI
Homology
[Close]
BLAST of CmaCh07G009510 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-64
Identity = 121/216 (56.02%), Postives = 158/216 (73.15%), Query Frame = 0 

Query: 15  FLLVSVSLSCCSEGEESAVVTLDSIVIYKTHEWLASKPTVYFKCQGGNKTKLPDVQKVHV 74
           FLL  +  S       +  VTLDS+ I+ TH+W ++KPTV+F+C+G NKT LPDV++ +V
Sbjct: 15  FLLCFIFFSSLPGTILTQEVTLDSVQIFTTHDWFSTKPTVFFQCKGENKTVLPDVKRTNV 74

Query: 75  LYSFNGEESWQPLTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNK 134
            YSFNGEESWQPLTE +  KCKRCG YE+D +K  D F+EWELCPSDFTA +G Y R+ +
Sbjct: 75  SYSFNGEESWQPLTELQGTKCKRCGIYEDDPLKY-DTFDEWELCPSDFTA-EGSYKRFKE 134

Query: 135 KEFNATFLCLECTAYSNVTSSSSHSHDTEK-----GMHAAAIILISVIVSTVLIIGMVIG 194
           KEFNATFLC  C   S V + S+    TEK     GMH   ++LI V++  V+ +G+++G
Sbjct: 135 KEFNATFLCHGC---SQVGAGSNKESGTEKEEQKGGMHPGIVVLIVVLLLGVVAVGLLVG 194

Query: 195 YKYWQKKRREQDQARFLKLFEDGDDIEDELGLNDVI 226
           YKYW+KK+R+Q+QARFLKLFEDGDDIEDELGL + +
Sbjct: 195 YKYWRKKKRQQEQARFLKLFEDGDDIEDELGLENTL 225

[Close]
BLAST of CmaCh07G009510 vs. TAIR 10
Match: AT5G02720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53490.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 56/139 (40.29%), Postives = 93/139 (66.91%), Query Frame = 0 

Query: 87  LTEFKSKKCKRCGFYEEDSIKSDDVFEEWELCPSDFTAPDGEYVRYNKKEFNATFLCLEC 146
           +T    +KCKRCG YE+ S+ SD  F+ WE+CP+DF+A    Y+ + +KE NATF+C  C
Sbjct: 1   MTGIGGEKCKRCGIYEQGSLVSDKEFDVWEVCPTDFSASQ-VYMHFKEKEINATFVCHGC 60

Query: 147 TAYSNVTSSSSHSHDTEKGMHAAAIILISVIVSTVLIIGMVIGYKYWQKKRREQDQARFL 206
             + +  ++SS   +   G+     I+  V+ +T++++G V  +K+ Q+ ++++DQARF+
Sbjct: 61  AKFHSAVAASSPQEEGYNGLTFMIAIIAGVLCTTLVVVGGVFMFKHTQRMKKQRDQARFM 120

Query: 207 KLFEDGDDIEDELGLNDVI 226
           +LFE+ D+ EDELGL+ VI
Sbjct: 121 QLFEESDEPEDELGLDPVI 138

[Close]
BLAST of CmaCh07G009510 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-06
Identity = 30/86 (34.88%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 138 NATFLCLECTAYSNVTSSSSHSHDTEKGMHAAAIILISVIVSTVLIIGMVIGYKYWQKKR 197
           ++ + C+     S+ T + + SH T        +I I +    V  +   + YK WQKK+
Sbjct: 34  DSVYQCISGDPNSSSTGAKAESH-TSSSKTGTKVIFILLGFGAVAGLSFFL-YKLWQKKK 93

Query: 198 REQDQARFLKLFEDGDDIEDELGLND 224
           R++  AR LKLFE+ D++E ELGL D
Sbjct: 94  RDEQYARLLKLFEEDDELEVELGLRD 117

[Close]
BLAST of CmaCh07G009510 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 8.1e-06
Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 0 

Query: 155 SSSHSHDTEKGMHAAAIILISVIVSTVLIIGMVIGYKYWQKKRREQDQARFLKLFEDGDD 214
           + SH+  ++ G     +IL+ V    V +    + YK WQKK+R++  AR LKLFE+ D+
Sbjct: 42  TESHTSSSKTG---TKVILVLVGFVAVAMFSFFL-YKLWQKKKRDEQYARLLKLFEEDDE 101

Query: 215 IEDELGLND 224
           +E ELGL D
Sbjct: 102 LEVELGLRD 106

[Close]
BLAST of CmaCh07G009510 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0 

Query: 141 FLCLECTAYSNVTSSSSHSHDTEKGMHAAAIILISVIVSTVLIIGMVIGYKYWQKKRREQ 200
           FL +     S+ T + + SH T        +I I +    V  +   + YK WQKK+R++
Sbjct: 27  FLGISGDPNSSSTGAKAESH-TSSSKTGTKVIFILLGFGAVAGLSFFL-YKLWQKKKRDE 86

Query: 201 DQARFLKLFEDGDDIEDELGLND 224
             AR LKLFE+ D++E ELGL D
Sbjct: 87  QYARLLKLFEEDDELEVELGLRD 107

The following BLAST results are available for this feature:
BLAST of CmaCh07G009510 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G009510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53490.11.3e-6456.02unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G02720.11.7e-2740.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G57765.23.6e-0634.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G09645.18.1e-0640.58unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G57765.11.1e-0537.35unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33780:SF3EXPRESSED PROTEINcoord: 13..225
NoneNo IPR availablePANTHERPTHR33780EXPRESSED PROTEINcoord: 13..225
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G009510.1CmaCh07G009510.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane