![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmaCh07G008290 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATTCCGCCGCACAAGAAACCTACGCAGCGCCGTCGTCACCTGCCTCGATTCTCAACCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAATCCTCTTTTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAACTCCGGCTACGAAATTTCGATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATATCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCGGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA ATGGCTGATTCCGCCGCACAAGAAACCTACGCAGCGCCGTCGTCACCTGCCTCGATTCTCAACCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAATCCTCTTTTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAACTCCGGCTACGAAATTTCGATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATATCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCGGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA ATGGCTGATTCCGCCGCACAAGAAACCTACGCAGCGCCGTCGTCACCTGCCTCGATTCTCAACCGCAGAACCTCGATTCCTTCCTCCGCTATCATGCCCCCACCAAACGTCGCCGTTTCCCCTCCTCTGTCCTCTCCGATCGACTTGAGGATCCTCTCCTCCAAATCCTCTTTTCAATCCTACACCTCTCTCAAGGACATCCTCCCCTCCGCCGCCTTCAACTCTCCCACTGCCGCATCTCCGGCCAACTCCGGCTACGAAATTTCGATCCGCAACCGCCTCGTTAAGCAAGCCGCTTGGGCTTATCTCCAACCTATGTCCGCTTCTTCCTATTCCACCGGCTCAAATATCTTCCACCGTTTCTGGCTCCGATTCTCCGCCGCGAATCCGATCGCTAATAGTCTTGGATTCATCAGAGGTAGTATCATTCCGGCCATAGTCCGAGTCATTCGGTTCTGCATTTGCTTGTGA MADSAAQETYAAPSSPASILNRRTSIPSSAIMPPPNVAVSPPLSSPIDLRILSSKSSFQSYTSLKDILPSAAFNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYSTGSNIFHRFWLRFSAANPIANSLGFIRGSIIPAIVRVIRFCICL Homology
BLAST of CmaCh07G008290 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of CmaCh07G008290 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of CmaCh07G008290 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.9e-07 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|