CmaCh07G007440 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G007440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 3298448 .. 3300968 (+)
RNA-Seq ExpressionCmaCh07G007440
SyntenyCmaCh07G007440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGAGTAAGAAGAAGGCAGCTGAAGTTGCAGTAAATGTAGCTGTTTTACCAAACCAAAAGCTTTCTGGTTTCTATGCTATGCTGTAAGATGTAACAAAAAGATAAATAAGGATAGTTTCGTTGTATACATCATTCCACATTGATTGAAAAAGATAACGAAATATTTCTTGTAAGGGTGTGGAAACCTCCCTTAGTAGATGCGTTTTAAAACTATGAGGCTAACGACAATATGTAACAGGCCAAAACGAACATTTCAACGTATATAACTACCTATATCAACGAAATTGAGACGATAAAATTGTCAAGGTAGACAGTAATAAGATTATTTGTGACGTACTAGGCTTGTATATGATTTCAATCAAACGCTTGCATTTATGAACACGAGACCCTTATCATTATTTATCGAACAAAGTCACATTACCGAAACCGATATAGAAATTTTAAAATGGTTTTGATATATCAAATAAGTTGGAGAAGAAAGGCCATTAATTCCTTTCTTTCCCCATAATGTGGCCCCTTCTACCCATGTACTCTTTTATAATGAAGAGAGTAGGTGGAGACATCATATTAATGTTATCGAAGGGGACACCACTTCTTAAGTAAAGACCCACTCTAATGAGCACACATGAACATGAACGTAATAAACGATATTGAATAGGGATCACCATTTATATCATAACCTACCTAAGAAGCTCTTGAAAATGATTGATGTTTAACGATGACATCTAAATCAAATATCATGATACTTATTCGATAAACCATTCCTAAATCAGTATGGATTTTGTATCAAGCTCAAAACCCACGAAAATGAAAATGAGGAAGTATGGTTGAGCTGAACTATACGTAGGCCATTAGAACTGTTAGTTCGAAAAGCTTTATAGCTCCATAACTCTAACAACCTATACTCTCTACCAAAATATCTTGCACGGGATTTTCAAACCACCCGATGCAGGTTGTAGGCGAGCTTCAGGGGAAAGGAAAGACGTTAGAAATTAAAAAGAGTATGTTGAAAGGAAAGGTTTTGCCAACGAGGCCACGTCCTTTGTAACATTTGGAGTAGTCGCCATTGGCCCATCTTCACTGCTCATCCATCTCTCTCAATTATTTCCCCTATATTTATTTCTTTCTTTTTTTTTAGTGAAATATTATGATTATATTCATTTAAAACTATTCATTAATTCCATTAAAAACAAAAATAATACCACACTCAATAATTGCACTCAAATTCCATTATAATTTATCATCCACAAAACCTATAATTCAAAATTATTAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGGTCAAGAAGCTTTCCCAAGACAATGTTTCATACTTTGTCATCTGATCTGTCTGCATGTGGTCATGTTGTCTTCTCTCTCTCTATCTAAACCAAAGACCGAAGAACAAAAAACAAGTGGAAGAGTGAAGAACAGAACAAAACAAGAAAACAAATATCTTCAAGAAGTTTTGAATTCTAAATGGTTGCTTAAAATATGGGCCCCAACATGGATTATTCACAAGAGATGTTAAACAAGTTTGATTTTGAAATAAAGAAATCATGCTTTGATTGGAGGAGAGCCTTAATGAAATTTGAGCTTTGACAAATGAGGTTGCTTTGGGGAAGATCAGGTACTTCTCAATTATTTTGAAATTTCTTTGACTTCAAATTATTTCTGTTGAATTCTTTTAATCCAAATCTCAGTTCCATAATTCCATTAGGCCCCACCAACATAATCAAATCGCTTTGGTTTGTTCTTAGTTAATTATGGGACCAACTCTCTAATCTCTTAATCAAAGTGTTTAAACTTGATTATCAAGTTCAACAACACCCACTAACCAGTATAGCTTCCACTGAGAAAAATCGAAGGAAAGAAAAATGGTGTGTTTCTGGAGATGCCCTTTTCCTCCATTATTGAGCTCGCAAATGAGCAATGTTGAGAAGGGCATTTCAGTCACTGTACTGACATTTTGATGCGGAGTGAAAGCGAAGGGGGTTCTTAATTTGGGGCATGCTTAGAATATCCACAGATATAACAAACAAAGCGATGTGGGAATCCAATAAAATTTGAAAAGTAGAGTTCGAAATGATGAGGAGGGGCGTGCCAGTTTGATTGATTACTGAGAAAGCTTCTTTGGTGTTTGATTACAGAGCAAAAAAGTTGTGCAAACTAATTCAGAGAGAGACCCACATCGAGATTCAATCATCAAAAGTGAGAAGAAGGCAAATCGGTAAGTGATAAAGTAGAGCCACACCCACCGCTTCGTTTCGCTTTTTTCTTTTGTGGGTCTTCTGGTTTTTTCTTTAATTCACAAAGTAAAAGCGTTTCTTCGCTAATTATTCCATTTACAAGGCTTTGTTCGTTGGTTCCCTTGATGCTCGACACCATAGCTTCCTTTTGAATCATATTACTCTGTCCTGGCTTCGAATAAGTGGTGGGTTTTCTCTGGCTTCTTAGGTCTTGATGGTATCGCATTAGCTGGTGAGTGA

mRNA sequence

ATGAATTGGAGTAAGAAGAAGGCAGCTGAAGTTGCAGTAAATGTAGCTGTTTTACCAAACCAAAAGCTTTCTGGTTTCTATGCTATGCTAGCAAAAAAGTTGTGCAAACTAATTCAGAGAGAGACCCACATCGAGATTCAATCATCAAAAGTGAGAAGAAGGCAAATCGGTCTTGATGGTATCGCATTAGCTGGTGAGTGA

Coding sequence (CDS)

ATGAATTGGAGTAAGAAGAAGGCAGCTGAAGTTGCAGTAAATGTAGCTGTTTTACCAAACCAAAAGCTTTCTGGTTTCTATGCTATGCTAGCAAAAAAGTTGTGCAAACTAATTCAGAGAGAGACCCACATCGAGATTCAATCATCAAAAGTGAGAAGAAGGCAAATCGGTCTTGATGGTATCGCATTAGCTGGTGAGTGA

Protein sequence

MNWSKKKAAEVAVNVAVLPNQKLSGFYAMLAKKLCKLIQRETHIEIQSSKVRRRQIGLDGIALAGE
Homology
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BLAST of CmaCh07G007440 vs. NCBI nr
Match: KAG6595076.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 30 LAKKLCKLIQRETHIEIQSSKVRRRQIGLDGIALA 65
          +A+KLCKLIQRETHIEIQSSKVRRRQIGLDGIA A
Sbjct: 13 IAEKLCKLIQRETHIEIQSSKVRRRQIGLDGIAFA 47

The following BLAST results are available for this feature:
BLAST of CmaCh07G007440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G007440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G007440 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595076.12.6e-0791.43BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh07G007440 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G007440.1CmaCh07G007440.1mRNA