CmaCh07G005950 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G005950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Hydroxyproline-rich glycoprotein family protein
Location	Cma_Chr07: 2556288 .. 2557479 (-)
RNA-Seq Expression	CmaCh07G005950
Synteny	CmaCh07G005950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCAAGACATTCAAGAACCCAAATCCTTCCCACTTTCTTCAAACAAATCCCAGTTCCACACGCCACATATCTCAGTTCAAACCAAAGGAAAAAGCCCAATCAAATCCTATCTTAAACATTCATTTTTCCATCGCATTTTCTACACAGATTCAAAGATTAAAGAACAAACATTTTTTTTTCACTTACAAAATTGTGAGCGTCGAGTGCAGAAGGCTGGTGGGTGGGCTCCATTTCTTGTTCTCCTCCTTTTTTTTTTTTTCCGTACTTAGCTGTACCCTTGCAATGTACACATACTTTTCTTTGCTTTTCTTCCTCCACTTGGCTCTGTTTTCCATTATAAATTCCCCAAGTGCGCTCCCATTTTCTCATTCCATTCTTCATTTTCTTCTCGATTTGGCATTTGGAGCTTTTTTCAATTTTCGTTTCTTGTTCTTTCTCCCAACACATGACACATTCCACATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCACCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGTAATTTTAATTTCGCTGCTCCTTCATCATTTCCTTTCGTTCTTTCGATTGTTTAAACGAGGAATTGATTTGTTGGAATAGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCGTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCAGGTGATAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAGCAGATTCAGAATCACCATTGATTCATCTGTGTACATAGTAGAAGGAAATTAATTCTTTTTCAGTTTCATCTTTCATCTTCCCTCCGGAAATACAATTTCATCGGCTCCAATTTCGTTGTGTGTATATTACAACCAGTTTCGTCGCTAATTTAACCTAATATTATTTCATCATTTTTAAAACACAAAATTAACTAATATCAGCATTAAGATATTAAGAGATTAAGAGATTAATATGTGAAACTCTCACCGTAC

mRNA sequence

ACTCAAGACATTCAAGAACCCAAATCCTTCCCACTTTCTTCAAACAAATCCCAGTTCCACACGCCACATATCTCAGTTCAAACCAAAGGAAAAAGCCCAATCAAATCCTATCTTAAACATTCATTTTTCCATCGCATTTTCTACACAGATTCAAAGATTAAAGAACAAACATTTTTTTTTCACTTACAAAATTGTGAGCGTCGAGTGCAGAAGGCTGGTGGGTGGGCTCCATTTCTTGTTCTCCTCCTTTTTTTTTTTTTCCGTACTTAGCTGTACCCTTGCAATGTACACATACTTTTCTTTGCTTTTCTTCCTCCACTTGGCTCTGTTTTCCATTATAAATTCCCCAAGTGCGCTCCCATTTTCTCATTCCATTCTTCATTTTCTTCTCGATTTGGCATTTGGAGCTTTTTTCAATTTTCGTTTCTTGTTCTTTCTCCCAACACATGACACATTCCACATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCACCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCGTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCAGGTGATAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAGCAGATTCAGAATCACCATTGATTCATCTGTGTACATAGTAGAAGGAAATTAATTCTTTTTCAGTTTCATCTTTCATCTTCCCTCCGGAAATACAATTTCATCGGCTCCAATTTCGTTGTGTGTATATTACAACCAGTTTCGTCGCTAATTTAACCTAATATTATTTCATCATTTTTAAAACACAAAATTAACTAATATCAGCATTAAGATATTAAGAGATTAAGAGATTAATATGTGAAACTCTCACCGTAC

Coding sequence (CDS)

ATGTACACATACTTTTCTTTGCTTTTCTTCCTCCACTTGGCTCTGTTTTCCATTATAAATTCCCCAAGTGCGCTCCCATTTTCTCATTCCATTCTTCATTTTCTTCTCGATTTGGCATTTGGAGCTTTTTTCAATTTTCGTTTCTTGTTCTTTCTCCCAACACATGACACATTCCACATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCACCTCCTCCCTTCGTCTCCATCCAAATCCAACTCTACTGCACTGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCGTGCCCTAGAGAGCCGCCTCGGCCGGAGATGATTCAGGTGATAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAG

Protein sequence

MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHMETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKPPKPPRIAIPFY

Homology

[Close]

BLAST of CmaCh07G005950 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.8e-35
Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 62  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDH 121
           T DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RS+RRS A       
Sbjct: 4   TQDFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANG--RPS 63

Query: 122 HLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKPP 181
             + S+P K      +++K Q  S+ V+MPGD+ PKFIA+PCP  PPRPE + V V+ PP
Sbjct: 64  ADIESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPP 123

Query: 182 -----KPPRIAIPFY 192
                KP R  +P Y
Sbjct: 124 QSPPVKPARFPVPLY 136

[Close]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL
Match: A0A6J1KQE2 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111497312 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 8.8e-102
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM 60
           MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM
Sbjct: 1   MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM 60

Query: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120
           ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD
Sbjct: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120

Query: 121 HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP 180
           HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP
Sbjct: 121 HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP 180

Query: 181 PKPPRIAIPFY 192
           PKPPRIAIPFY
Sbjct: 181 PKPPRIAIPFY 191

[Close]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL
Match: A0A6J1HHX0 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111463125 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-67
Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
           DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMI V VEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 180 PPKPPRIAIPFY 192
           PPKPPRIAIPFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL
Match: A0A6J1BVL2 (uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 3.0e-57
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---H 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
            H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFIAMPCPREPPRPEMIQV VEK
Sbjct: 61  PHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEMIQVKVEK 120

Query: 180 PPKPPRIAIPFY 192
           PPKPPRIA+PFY
Sbjct: 121 PPKPPRIAVPFY 129

[Close]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL
Match: A0A6J1GCM8 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111452993 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.9e-53
Identity = 107/131 (81.68%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           ME+PDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q    
Sbjct: 1   MESPDFSPPHADASRPSLAFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---- 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
                P+SPSK   T+LDLEKNQR+SLSV+MPGDSIPKFIAMPCPREPPRPEM++V VEK
Sbjct: 61  ---FNPTSPSKFTPTSLDLEKNQRDSLSVMMPGDSIPKFIAMPCPREPPRPEMVEVKVEK 120

Query: 180 PPKPPRIAIPF 191
           PPKPPRIA+PF
Sbjct: 121 PPKPPRIAVPF 124

[Close]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL
Match: A0A6J1IPP8 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111478811 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.9e-52
Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           ME+PDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q    
Sbjct: 1   MESPDFSPPHADASRPSLAFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---- 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
                P+SPSK   T+LDLEKNQR+SLSV+MPGDSIPKFIAMPCPREPPRPEM++V VEK
Sbjct: 61  ---FNPTSPSKFTPTSLDLEKNQRDSLSVMMPGDSIPKFIAMPCPREPPRPEMVEVKVEK 120

Query: 180 PPK--PPRIAIPFY 192
           PPK  PPRIA+PFY
Sbjct: 121 PPKPPPPRIAVPFY 127

[Close]

BLAST of CmaCh07G005950 vs. NCBI nr
Match: XP_023003846.1 (uncharacterized protein At5g65660-like [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM 60
           MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM
Sbjct: 1   MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM 60

Query: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120
           ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD
Sbjct: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120

Query: 121 HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP 180
           HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP
Sbjct: 121 HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP 180

Query: 181 PKPPRIAIPFY 192
           PKPPRIAIPFY
Sbjct: 181 PKPPRIAIPFY 191

[Close]

BLAST of CmaCh07G005950 vs. NCBI nr
Match: XP_023518276.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 187/191 (97.91%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   MYTYFSLLFFLHLALFSIINSPSALPFSHSILHFLLDLAFGAFFNFRFLFFLPTHDTFHM 60
           MYTYFSLLFFLHLALFSIIN PSALPFSHSILHFLLDLAFGAF NFRFLFFLPTHDTFHM
Sbjct: 1   MYTYFSLLFFLHLALFSIINYPSALPFSHSILHFLLDLAFGAFSNFRFLFFLPTHDTFHM 60

Query: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120
           ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD
Sbjct: 61  ETPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHD 120

Query: 121 HHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKP 180
           HHLLPSSPSKSN TALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQV VEKP
Sbjct: 121 HHLLPSSPSKSNPTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVKVEKP 180

Query: 181 PKPPRIAIPFY 192
           PKPPRIAIPFY
Sbjct: 181 PKPPRIAIPFY 191

[Close]

BLAST of CmaCh07G005950 vs. NCBI nr
Match: XP_022962719.1 (uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypothetical protein SDJN03_11476, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026886.1 hypothetical protein SDJN02_10893, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
           DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMI V VEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 180 PPKPPRIAIPFY 192
           PPKPPRIAIPFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of CmaCh07G005950 vs. NCBI nr
Match: XP_022133072.1 (uncharacterized protein At5g65660 [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 6.1e-57
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---H 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
            H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFIAMPCPREPPRPEMIQV VEK
Sbjct: 61  PHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEMIQVKVEK 120

Query: 180 PPKPPRIAIPFY 192
           PPKPPRIA+PFY
Sbjct: 121 PPKPPRIAVPFY 129

[Close]

BLAST of CmaCh07G005950 vs. NCBI nr
Match: XP_038881262.1 (uncharacterized protein At5g65660-like [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 6.8e-56
Identity = 114/132 (86.36%), Postives = 121/132 (91.67%), Query Frame = 0


Query: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH 
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60

Query: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179
           D   L SSPSKSN T+ DLEKNQRESLSV+MPGDSIPKFIAMPCPREPPR EMI+V VEK
Sbjct: 61  DDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPPRAEMIEVKVEK 120

Query: 180 PPKPPRIAIPFY 192
           PPKP RIA+PFY
Sbjct: 121 PPKPLRIAVPFY 132

[Close]

BLAST of CmaCh07G005950 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-36
Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 62  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDH 121
           T DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RS+RRS A       
Sbjct: 4   TQDFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANG--RPS 63

Query: 122 HLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEKPP 181
             + S+P K      +++K Q  S+ V+MPGD+ PKFIA+PCP  PPRPE + V V+ PP
Sbjct: 64  ADIESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPP 123

Query: 182 -----KPPRIAIPFY 192
                KP R  +P Y
Sbjct: 124 QSPPVKPARFPVPLY 136

The following BLAST results are available for this feature:

BLAST of CmaCh07G005950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSK9	6.8e-35	57.78	Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 P...	[more]

BLAST of CmaCh07G005950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQE2	8.8e-102	100.00	uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC1114973...	[more]
A0A6J1HHX0	5.4e-67	98.48	uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1BVL2	3.0e-57	87.12	uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755...	[more]
A0A6J1GCM8	9.9e-53	81.68	uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1IPP8	4.9e-52	80.60	uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC1114788...	[more]

BLAST of CmaCh07G005950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003846.1	1.8e-101	100.00	uncharacterized protein At5g65660-like [Cucurbita maxima]	[more]
XP_023518276.1	1.9e-98	97.91	uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962719.1	1.1e-66	98.48	uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypoth...	[more]
XP_022133072.1	6.1e-57	87.12	uncharacterized protein At5g65660 [Momordica charantia]	[more]
XP_038881262.1	6.8e-56	86.36	uncharacterized protein At5g65660-like [Benincasa hispida]	[more]

BLAST of CmaCh07G005950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65660.1	4.9e-36	57.78	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34291:SF11	SUBFAMILY NOT NAMED	coord: 62..191
IPR037699	Uncharacterized protein At5g65660-like	PANTHER	PTHR34291	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 62..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G005950.1	CmaCh07G005950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane