CmaCh07G005300 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCCACCCCCTCACTCTCCATCTCCCTCTCATCGCTTTCGGTTCATTGCTTTAAAGATGCTGCTGGGGAAGCGGTCTCGTGTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGGGTCTCGCCGACGAAGAGTTGGGAGAATCGTCGGATCAGGGCGCCCACGCGCCGCCTCCCGCCGTGGGGGTTCCCCATAATACGACAATGCTCAATTACTCTGCCTTGGTTTCTCCTAGAAATTTTGGAGTTCAGTTGGGCTCTAATGATCACTTTCTTCACACGTGCGGCCTCTGCAAACGTACCATCGCTCCCGGTCGTGATATCTATATGTACAGGTACTACTCCATTTCTTTTCCTTTTTTTTTTTTTTTTCTGAATATATTAAAAAAAAATTGTTATATGTTTGGCAGAGGGGACACGGCTTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGACGATGAGAAAAAAGAGTACGGAGGGAAGAAGAAAGATGCGCGGCAAGCGGCGGCGGCGGGGGAAAGAGGGTCGAGGTCTAAGAAGGAACCAGACAGTAGGAGTTGACAGCACCGGCAGCGATCCCGACACCGCGTCCGCCGACGCATGTGTAGTTGGATGCTGTCGGGCTGTTGGATTTGGAAGTTAGTAGATGATGAGGGGTAATATGGTAAATTTGGGCAATTGTATAAACGGAATTATTTAGAAGATCCAAAAAATGGAATTAAAAAATGCTGTGGGTGGAAGTACTGTCTGAGGTAGACTTTTCATTAGGGGTATTATTGTAATTTCATGATTTGAAATGAGTGAAAGAGTCTAATTACTGGACCTTAAAAAATAAAATTATTTTTTTTTATTGGTATCAGTAAATATTCGGCGAAT CACCCACCCCCTCACTCTCCATCTCCCTCTCATCGCTTTCGGTTCATTGCTTTAAAGATGCTGCTGGGGAAGCGGTCTCGTGTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGGGTCTCGCCGACGAAGAGTTGGGAGAATCGTCGGATCAGGGCGCCCACGCGCCGCCTCCCGCCGTGGGGGTTCCCCATAATACGACAATGCTCAATTACTCTGCCTTGGTTTCTCCTAGAAATTTTGGAGTTCAGTTGGGCTCTAATGATCACTTTCTTCACACGTGCGGCCTCTGCAAACGTACCATCGCTCCCGGTCGTGATATCTATATGTACAGAGGGGACACGGCTTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGACGATGAGAAAAAAGAGTACGGAGGGAAGAAGAAAGATGCGCGGCAAGCGGCGGCGGCGGGGGAAAGAGGGTCGAGGTCTAAGAAGGAACCAGACAGTAGGAGTTGACAGCACCGGCAGCGATCCCGACACCGCGTCCGCCGACGCATGTGTAGTTGGATGCTGTCGGGCTGTTGGATTTGGAAGTTAGTAGATGATGAGGGGTAATATGGTAAATTTGGGCAATTGTATAAACGGAATTATTTAGAAGATCCAAAAAATGGAATTAAAAAATGCTGTGGGTGGAAGTACTGTCTGAGGTAGACTTTTCATTAGGGGTATTATTGTAATTTCATGATTTGAAATGAGTGAAAGAGTCTAATTACTGGACCTTAAAAAATAAAATTATTTTTTTTTATTGGTATCAGTAAATATTCGGCGAAT ATGCTGCTGGGGAAGCGGTCTCGTGTTCCGATCAAGAGAACCACCAGCATGACCGGAATCAGGGGGGGTCTCGCCGACGAAGAGTTGGGAGAATCGTCGGATCAGGGCGCCCACGCGCCGCCTCCCGCCGTGGGGGTTCCCCATAATACGACAATGCTCAATTACTCTGCCTTGGTTTCTCCTAGAAATTTTGGAGTTCAGTTGGGCTCTAATGATCACTTTCTTCACACGTGCGGCCTCTGCAAACGTACCATCGCTCCCGGTCGTGATATCTATATGTACAGAGGGGACACGGCTTTTTGCAGTTCGGAGTGCAGAGAGAAGCAAATAAAAGACGATGAGAAAAAAGAGTACGGAGGGAAGAAGAAAGATGCGCGGCAAGCGGCGGCGGCGGGGGAAAGAGGGTCGAGGTCTAAGAAGGAACCAGACAGTAGGAGTTGA MLLGKRSRVPIKRTTSMTGIRGGLADEELGESSDQGAHAPPPAVGVPHNTTMLNYSALVSPRNFGVQLGSNDHFLHTCGLCKRTIAPGRDIYMYRGDTAFCSSECREKQIKDDEKKEYGGKKKDARQAAAAGERGSRSKKEPDSRS Homology
BLAST of CmaCh07G005300 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.5e-18 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.9e-17 Identity = 59/127 (46.46%), Postives = 74/127 (58.27%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14 Identity = 51/125 (40.80%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.9e-14 Identity = 55/121 (45.45%), Postives = 64/121 (52.89%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy TrEMBL
Match: A0A6J1KQZ2 (protein MARD1 OS=Cucurbita maxima OX=3661 GN=LOC111497463 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy TrEMBL
Match: A0A6J1HDX6 (protein MARD1-like OS=Cucurbita moschata OX=3662 GN=LOC111463300 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.4e-69 Identity = 138/150 (92.00%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy TrEMBL
Match: A0A0A0KK56 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500590 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.2e-47 Identity = 105/151 (69.54%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy TrEMBL
Match: A0A5A7T493 (Protein MARD1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002670 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 3.0e-41 Identity = 102/158 (64.56%), Postives = 112/158 (70.89%), Query Frame = 0
BLAST of CmaCh07G005300 vs. ExPASy TrEMBL
Match: A0A1S3B1J1 (uncharacterized protein LOC103484988 OS=Cucumis melo OX=3656 GN=LOC103484988 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 3.0e-41 Identity = 102/158 (64.56%), Postives = 112/158 (70.89%), Query Frame = 0
BLAST of CmaCh07G005300 vs. NCBI nr
Match: XP_023004031.1 (protein MARD1 [Cucurbita maxima]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CmaCh07G005300 vs. NCBI nr
Match: KAG6594866.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026831.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273.9 bits (699), Expect = 8.2e-70 Identity = 140/149 (93.96%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of CmaCh07G005300 vs. NCBI nr
Match: XP_022962947.1 (protein MARD1-like [Cucurbita moschata]) HSP 1 Score: 270.4 bits (690), Expect = 9.1e-69 Identity = 138/150 (92.00%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of CmaCh07G005300 vs. NCBI nr
Match: XP_023518831.1 (protein MARD1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68 Identity = 138/149 (92.62%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of CmaCh07G005300 vs. NCBI nr
Match: XP_004143480.1 (FCS-Like Zinc finger 5 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_003848 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46 Identity = 105/151 (69.54%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of CmaCh07G005300 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of CmaCh07G005300 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18 Identity = 59/127 (46.46%), Postives = 74/127 (58.27%), Query Frame = 0
BLAST of CmaCh07G005300 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 51/125 (40.80%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of CmaCh07G005300 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 55/121 (45.45%), Postives = 64/121 (52.89%), Query Frame = 0
BLAST of CmaCh07G005300 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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