CmaCh07G004610 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G004610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 2009942 .. 2016579 (+)
RNA-Seq ExpressionCmaCh07G004610
SyntenyCmaCh07G004610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTAGCCTGTGGGGCCATGTACTTCTCATCGTGTTTGCCGTTCTTCATTGAGGCATTTCATCAAACACCTTGTGAGTCCTTTTTCTTAACTGTGGTTTGTCACTTTCTTCCCACCCTTCATCTCTGTGTTTGCTGTGCTGCTAATTACAGTGACAAAAGAGTCCATCCATCTGCAGTAGGATCATCCAACAGGTTATGATATTCACTGTTGATAGGCTAGGCATTAGCTGTAAATCTTCATAAATCATGTTCCAGACACAAAAGTAATATGGTGTTTGTTGGATGAAATTGATTGGAATATGATAATTAGAGGGTAGGAGCCATAATCATGAAAGCTAACAGAACCTTCTATAAACATGCCTCTATAATTCTTCTCTAAGAGAAGCTTGTTTAGCTTTAAAGAGGGAAAGGTAAAGGATTGGAACATATAATATGAAAAAGTCAACATAATCATAGTACTAACATGGACAACTGCAGCTGTTACAAAAATTCTAAATGTCACTCATGAAGTGTTTTGGACCATCCACTCTTTTCCACACCCTTTATTTAATTAGCTAAATGACATTGGTTTATAAAATATCAACGTAGAATCCAATGTTCACATGCATTTGAAACTCTAAGGACCCATTCTTTTTGTGGAATAGACATTTCATTGGATTCCTTTTTATGGAAAGAACTTCTCTTTGATCCTTTAATCAAGTGATTGAAAACTGGGGCCGACATAAAGATAAGAGAAGATGAGAATTTTCTGTTCTCATTTTGGATTAGCAAAAAATGAAAAGGGCATACAGCTAGAAACTTTTGGTTGGGTAGAAATGTGAATTCCCTCGGGTCATCCTCAGGTCATCCTCAGGTCACCCTCGGGTCATCCTCAGGTCACCTGGGAGTTCTTATGCTTGTCATTTAATATCAAGAAAGTATCAATCACAAAGTCAACAGATGGAATCAAAAGTACCCTGCCATTGTGACTCAGAATTCTGGGAAGCTTTAGGAACTATGGGTGACGAAGTAACCACCAGAGGATCTAAAACAATGGAGTAAGGTTGTACTTGGCAGAGACACCACTTACCTGAAATTGGAATAGTTGGTGCCCCCAGATATCCTGTCTGGCGAGCCACGGCACCATGTGATTGCCCATGATTTGAGAGGCTAAGGCGATTTGAAATCGCCACCAAGCCCCCATTCTCACACCGTTCTTCTTTTCCCCTAACATGGTGTAAAGACTTATGCTGTAATAGTACTTTGGAACTGTTCAGGAATTAGGCATTCATTGTGGGAATAGATTGATTGAGAAGCAATTGCTGGGTGACATACGAGCTTGTTCAGACCTCATAAGGTCGATGGCCTTATCTTGCTCTTCCTTGATTTCCAAGATCTTCACAAACTAAATCTGCTGAATCTATCAGAAAATAATTGGATATCGTTGTCATGTGGTTCAGTTTCATGTCAGCACAAACATTTTGTTTTCTGCATTGCTTTTCTGAAGAACTGAATACTATGACTTGTTTGTAAAGGAACCAGGAAGAGCAGAGAAAACAATTGCTAGTTCGATTGAACGACAGTAACAAAGGAAGAATCCATCTCAGCCTTCGCTGGTATTGTGATCATTGATTGATCACCTAGAGATACCAATGAAGCTGTCACCATAGACAACGAGAAGGAGCTCCAAATTGGACATGTAAGCAATAACGAACAAGGATTTACATTTCTATTTGTCTGGTTATTTTCCAACAAAGTACAAAGGTGATCCCAATGTGAACCAGATTTTCTTTTTTCGTTTGCATTTAAAACATGATAATAATGAAGCTTGTTCGTTCTATTATGGTAACAGGAACTGGGAGCTTCTGGAACCATGGCCGGGATAAAAAATTGGGGTCCTGACAATAAAGAAATTGGATTCGAATCAGCGAGAACCAAAGAATATGTGGAAGGAGATGTACTCAAGAGCCTCGTACCCGCCCTTGAAGTTATTATATTAGAGGCCACCATTTCATCCAACAGGAGAGAGCTCAGCAAGACTTCCGTGGACTTTTTCCTCTATAAATGTCTTTGTACATAGTCTCTGTGCTTCACCTCCTGTAATCTCAAAAGCAGAGAGATTTTCATTAACATGAAGAAAGAGGAAAGCAATGGATCAAATACTCAATTATTGGAATACAAATACCAGCTTCTGCAATGAAGAAATAGCAATATAGTTGGAACAACAAATTTTATTCCCTTTGTCTTGTCAGTTTGAGGAAGTTTAAGACGTTTTCATAGACAATGAACGTGATCAAAGCCGCAGGGACATTCTTTTGAGAACCAAGTCACTCAAGAGTCAGCTAAGATAAATGACTATAAAAACAACACCATAGTTCATACCATAAGTCAAATTTCTATTTACTTGAAATGGGTATGTAAGAAGCATGGCAGCAATTTTAGAAGATCCTCCAAGAACAGCATAATCAACTGAATTCTGCATGAAAAAAACCCACAGTAAGAGTTTATATTTCATGTGGCGAAGACTAGAACTAATGGAGTAAGGTTCTTAAAAGGCAATGGTTTTTATGTCATCTGAATGTTGCTTATAATTTATGATCATTGCAAGAATATACCCTAGGTGAATGGAAGAGGCTAAGATATACTCGAATATACTATTGTATGATTAGCTATATGGAGGACAAGCATCTGAAAAGGTTATACGCTATAGGCTAGATCAAATAAATATTTCCTGTAACAGCACAAGGTCACCGCTAGAAGATATTATCCTTTTTGGGCTTTCCCTTTCGAGCTATCTCTCAAGGTTTTAAAACGCGTCCACTAGGAAGAGGTTTCCACACTCTTATAAGGAATGTGCTTCGTTCCCCTCTTCAACCAATGTGGGATCTCACAATCCACCCCCCTTGAGGGTCCAGCTCCTCGCGGCACACCATTCGGTATCTAGCTCTGATACCATTTGCAACAACCCAAGGCCACCGCTAGCAGATATTATTCTCTTTAGGTTTTCCCTTTTGAGCTTCCCCTCAAGGTTTTAAAATGTGTCCACTAGGGAGAGGTTTCCACACCCTTAAAGGAATGATTCGTTCCCCTCTCCAATAGACGTGGGATCTCACATTTCCACTTCTCCTAGAACTCAATATAGTGGTGTTGGTAAACTCAAGCCAGAAACTTGTACCAGTAATTCCCCAGAACTTTGAGAATTCACTTTGGTCCATCAGACCTCGAGTTGGCAATAAATGTACGGAGTTCTTCATAAACTGTAAATGCACCATGAGAAACCTGCTGAAGCAACCAAACACATCTATGAACTAATTCCATGAAATTCTGTCAACAGAATGCCTTTTTATGACAAATGTACAAACACTCTCCCATTCCATAAAAACCCTCAACAACATTTTTACAACCCCACAAGAAATAGGAAGGAAAAAAAGGAATAAAGGAAGAAAAGAACAAAAAAAAACTGATCCCAAGAGCCCATATTTGATAAAATGAAAATTAGAGTACAATGATATGAATGGAAGCCACGAAAGTTTAACCAATATGCATATATGTACTGATAAATAGATGGATAGATAGGAAACGTATGATGCTATTAACGGAGCCAAAATTGCAAAAAAAAAAGGGGGAGATGAGATATCCTCACAAAACCAATGGGTTACAAAAACTAAGTAATATAATAAGATTACTCTGGAGAAGCAAAATAATCACACTGTTAAGAGAAAACATAACCTAAATCCAAACAGCTTACAAGGAAAAGGCCAGGAACAATCTTTTTTTCTTCTCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGATTACTCCTTTCTAAACAAAACCAAGAGGAGAATTTTTAGCAAAATCCTTCGGTTTATGAATGGGTTTGGATCTTGTTGTTTCCCTTATTTATTCTCTCTTTTTGATGAATTGTTTCTTTGAAAAGCTTTCATTCTTTGACAAGTCTAAAAAATCAAGGTAGACTAGATAAAACAACTGAAGCTTAACTTAAAACAACCGTCACAGTTTTCGAAGTAAAAATCATCACATCATCATCATTATAAGCCATTAAACATTATCACGACACAGTGGGAGAGAAGGGGGAAAATATGAAATACTGAAGCTTAACTTGAATACAAATCACAAGACCTTGTAATTTACTAGGATAAGATATATCCCAGAGAGCATATTAAGATAGAAGGGCAGACCATATAGCCCAGAATAAGGTTGCGCTTGATGAAGAGGATTCTGAAGCTGCATTCTTGTTTTCACAAGCCAAACTGGATTTGTGCAAAAAACAAACCTGAAGAGGCAGTAGAACCACAATTGTTAACATAATAAAAACTAAAAACTCTAATAAAATGAGGATAGAGAAGCACTTTTCTAGTAAGTCAAAAGTGCAATAATGGAATTGTTTGACGTAAAAAGCATAAAAGGTCCAGGAAGGTATTGCAGAGCTTCATGTTGGACTCACCAAAGCTCCTGCTTCTGCTGCAGAAACAAGATGAAGCCTGGGACTCAAGTTCTTTTCATTGTCTGAATATATTTGTTTGGCTCTGCCATAGCTACCATAAAACGGGGAAAACATTTAATGGAGTTTGAAAGACTAGATGAAATGTTCAGCCAACAAAGAAAATGTTAATAAATTAGTCAATCGCTTGGACAGACTTCAGTTATGTACTTAAATCACAAGTAGGATAATTATATCACAAGTTCACTACAACAGTTGCAAACTAATAGCCTTTCCCTCGTCTTTAGCTGAAGAGGCCTCAAGGATGGTTCAAAGTCGGTTGCCCCTCCCTCTAGTATTAGAGATTTGAGCTCGTTTGAGGATATTACAAAATTTATTGAGTTTTTTTAATAATTCTCGAAGGGGACCGATCCCTTTCCCTTGGTACTTTTTTTCCCTTTTCTCATTTGAGGATATCAAAGGTGCTTTAGAGGAGGATAGTTTGGATTTTAGTAATGATCCAGTTGGTAGAGTTATTAGCATTGATTCTAATTTTGAAAGGAATCTGCATGACTTTTCCAAAGATTCAAGCGATGAAGGGCTTTTATATCCTTCATCAAGGGAATTAACTCTATTACTAATGCTGATCTCAACACTTCAGAAGCTCCAAAAGATTCTTCAGATATTATTGATGACCTTTGTAAATTTTTAAAGCTTGCAGCAGGTCCTTTGTCTGAGAAGGGGTTTGCTTTCAATGTTCCTCGTGGACTTGAAAGGGAGTTGGAGTAGCCTTTCTTCCTGGAGTCTGCAAGGCTTTCTCGCTGAGTTTTGTCCTATGAACAGTGGTTTAGCCGTTTAGGAGCTGGTTTGTATATGGTTCTAGCTTCAATGGCTCTTCAGTTAAGCAGCCTTGCTTTTAGAACAATTTTGTTTGTTTGCTTGTTTGTTTGTCACCTGGGCACTTCATTCCTTGATGTTTTATTTTGGCTATTGTATCCTTTGAGAATCTTTTCCTTATTGGTTTGGTTGCTGGTTCTCTTCACTCCCTTCGGGAGTATGTATCCTTTGGGAATCTTTTACTTATTGGTTCAGTTACTGGTTCTCTTCACTCCCTTTGGGAGTATGTATTTTTTGGAAATCTTTTATTTATTGGTTTGGTTGCTGGTTCTCTTCACTCTCTTTGAGAGTATCTATCCTTTGGGAATTGGTTTGGTTGCTGGTTTTCTTCACTCCCTTTAAGAGTATGTATCCTTTGGGAATCTTTGACTTATTGGTTCGATTGCTAGTTCTCTTCACTCCCTTTGGGAGTATGTATCCTTTGGGAATCTTTTACTTATTGGTTTGGTTGCTGGTTCTCTACACTCCCTTTGGGAGTTTGTATCCTTGAACTTTCTTAAAACAAGACTTCTTTAGTTTTCAAAATTTAGAAGATTTTGACAAAAACATAGGTAGCAAAACAAAGAAACACATGAACAAAAGTAGTATTTGTATGCTTAATTTTTAAAAAACAACAAACAAAACAAAATATTTATCAAACATGACCTGTAATTTATTCTAAGAGACAAGGCTGTGTTTTCCAACATGTACTTTATGCAAACTGAATATTCACAAGTCACATGTGGGACGGGTCAAATGCAACAGATGATGGGCAGTCTGAAAAGCACAAAAATGGACTCAAGCATTAGCACGAATCATTTAATTACGATATGGATAAGATTAGACACACATAAGGATACTAAAATCGGATGCAGTTTATGGTTCGGATTTAGGGTCTTAGACTAAGACAAATGGCAGAAGAATTTGGTCTATGCGAGGAAGAATTCATCCTGAAAATGTGAGTTGCGAGCAATATTCGAACAAAGTTTCATCTAAAAGGTTAAGCAAGCAAATTTCATGGCACTTTCACAAAGCTTACCATTTCTTTTACAGAAGAACCAAATTAGTATAGCCCAGATCACAAAATTCGTGGGGAAATAGCAGAAAAAGCCAGCAAATGATCGGAATTAGGAGTAGCAAACACTGAATCTACAAACCTCCATCCGACCAATAGTGAAGATTGCATTAACTGTGCTCTTGTAAGTCGGGAGACTGGATCCTCCGCGATCACAACCTGCCATTTCGAGGGCAAAGGAGCAAAAACAAATGTTAG

mRNA sequence

ATGGATCTAGCCTGTGGGGCCATGTACTTCTCATCGTGTTTGCCGTTCTTCATTGAGGCATTTCATCAAACACCTTGTGAGTCCTTTTTCTTAACTGTGGTTTGTCACTTTCTTCCCACCCTTCATCTCTGTGTTTGCTGTGCTGCTAATTACAGTGACAAAAGAGTCCATCCATCTGCAGTAGGATCATCCAACAGAGATACCAATGAAGCTGTCACCATAGACAACGAGAAGGAGCTCCAAATTGGACATGAACTGGGAGCTTCTGGAACCATGGCCGGGATAAAAAATTGGGGTCCTGACAATAAAGAAATTGGATTCGAATCAGCGAGAACCAAAGAATATGTGGAAGGAGATGTACTCAAGAGCCTCGTACCCGCCCTTGAATCGGGAGACTGGATCCTCCGCGATCACAACCTGCCATTTCGAGGGCAAAGGAGCAAAAACAAATGTTAG

Coding sequence (CDS)

ATGGATCTAGCCTGTGGGGCCATGTACTTCTCATCGTGTTTGCCGTTCTTCATTGAGGCATTTCATCAAACACCTTGTGAGTCCTTTTTCTTAACTGTGGTTTGTCACTTTCTTCCCACCCTTCATCTCTGTGTTTGCTGTGCTGCTAATTACAGTGACAAAAGAGTCCATCCATCTGCAGTAGGATCATCCAACAGAGATACCAATGAAGCTGTCACCATAGACAACGAGAAGGAGCTCCAAATTGGACATGAACTGGGAGCTTCTGGAACCATGGCCGGGATAAAAAATTGGGGTCCTGACAATAAAGAAATTGGATTCGAATCAGCGAGAACCAAAGAATATGTGGAAGGAGATGTACTCAAGAGCCTCGTACCCGCCCTTGAATCGGGAGACTGGATCCTCCGCGATCACAACCTGCCATTTCGAGGGCAAAGGAGCAAAAACAAATGTTAG

Protein sequence

MDLACGAMYFSSCLPFFIEAFHQTPCESFFLTVVCHFLPTLHLCVCCAANYSDKRVHPSAVGSSNRDTNEAVTIDNEKELQIGHELGASGTMAGIKNWGPDNKEIGFESARTKEYVEGDVLKSLVPALESGDWILRDHNLPFRGQRSKNKC
Homology
[Close]
BLAST of CmaCh07G004610 vs. NCBI nr
Match: KAG7026771.1 (hypothetical protein SDJN02_10777, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 2.9e-46
Identity = 110/188 (58.51%), Postives = 117/188 (62.23%), Query Frame = 0 

Query: 1   MDLACGAMYFSSCLPFFIEAFHQTPCESFFLTVVCHFLPTLHLCVCCAANYSDKRVHPSA 60
           MDLACGAMY SSCLPFFIEAFHQTPCESF LTVVCHFLPTLHLCVCCAANYSDKRVHPSA
Sbjct: 1   MDLACGAMYLSSCLPFFIEAFHQTPCESFLLTVVCHFLPTLHLCVCCAANYSDKRVHPSA 60

Query: 61  VGSSNRDT--NEAVTI-----------------DNEKELQIG------------------ 120
           + SSNR +  +  VT+                 D+E    +G                  
Sbjct: 61  IESSNRSSSGHPQVTLRSPSGHPQMESKVPCHCDSEFWEALGTMGDELVPPDILSGEPWH 120

Query: 121 ----------------------HELGASGTMAGIKNWGPDNKEIGFESARTKEYVEGDVL 130
                                  ELGASGT+AGIKNWGPDNKEIGFESARTKEYVEGDV 
Sbjct: 121 HVIAHDLRGYGDLKSPPSPHSHTELGASGTLAGIKNWGPDNKEIGFESARTKEYVEGDVF 180

[Close]
BLAST of CmaCh07G004610 vs. NCBI nr
Match: KAG6594803.1 (hypothetical protein SDJN03_11356, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-29
Identity = 79/151 (52.32%), Postives = 81/151 (53.64%), Query Frame = 0 

Query: 1   MDLACGAMYFSSCLPFFIEAFHQTPCESFFLTVVCHFLPTLHLCVCCAANYSDKRVHPSA 60
           MDLACGAMY SSCLPFFIEAFHQTPCESF LTVVCHFLPTLHLCVCCAANYSD+RVHPSA
Sbjct: 1   MDLACGAMYLSSCLPFFIEAFHQTPCESFLLTVVCHFLPTLHLCVCCAANYSDRRVHPSA 60

Query: 61  VGSSNR------------------------------------------------------ 85
           + SSNR                                                      
Sbjct: 61  IESSNRSSSGHPQVILRSPSEFWEALGTMGDEVSTRGSKTMEKELGIHRGNRLIEKQLLG 120

The following BLAST results are available for this feature:
BLAST of CmaCh07G004610 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004610 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026771.12.9e-4658.51hypothetical protein SDJN02_10777, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6594803.11.1e-2952.32hypothetical protein SDJN03_11356, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh07G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G004610.1CmaCh07G004610.1mRNA