CmaCh07G004040 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G004040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 1744770 .. 1745600 (-)
RNA-Seq ExpressionCmaCh07G004040
SyntenyCmaCh07G004040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATCAATGATATGGTTCTATTCTATTCTATGCCTCTCGTTTGCATCCACTTTCTGTGTCTCTGGTTTATATTTATGGAGCCCATTGAAATCCCTTGTGTATTGATGCCTTTCCGCCATCGCTGTTGGTTTTCTCTTAGACGTGTTCTTGGTGCCACGCCAGGTAGAACCAACCACCAAACTATTTCAATTCCCCTTTCATTTCATCTCACGGATTGACGGGCTTTTCTTCTTCTTCTTCTTCTTCTTCAATTTTCGTTGTGCCCTAGAAAGAGAGCAGAAGATAAATTTGAAACCGCTTTTGCGTACTGTTCTTGTTTGATCGATCCGTGGTTCTATCGCTTTTCGAACCCACGGGTATTGCTCTGTTCCTTTTGGATCATCGTTTTCATTTGGTATCATTCGGTAGCTGACCGACCTGATCGAATAGCGTAGTTTCTGAGTGAGTTCGTGTTACTCTTTTCAATCATCTTTGTCATTTAGTTTTTATGAATTTAAACGTGAGGGTAGATTTGAGTATTTGATATTGTGTATTGCTGTAGCCCTTTTGTTAATTTCGATATGAAGTCAACGGATTATGCGAGTTTTTTGTTAATTTCTCTGTTTTAATTTGAATTTGAGGCATCAGAGATGCTAGGTTTCTGTTCTATTGTGGATTTTTTGTAGTTCATCGAGTTAGTTGACTGAAATATAGGAAATTATAGGAGCCATTCATCAGATTTAGGGGTTTTGCTGCTTCGAATTGTGAGTGATTTCTGTTCTTCTTTTTGTTTTGTTTAGTTTGCTGGGAAAGACGGCTGGTGGGAGCTTTTAGAAAGAAGGGTGTTGTGA

mRNA sequence

ACGATCAATGATATGGTTCTATTCTATTCTATGCCTCTCGTTTGCATCCACTTTCTGTGTCTCTGGTTTATATTTATGGAGCCCATTGAAATCCCTTGTGTATTGATGCCTTTCCGCCATCGCTGTTGGTTTTCTCTTAGACGTGTTCTTGGTGCCACGCCAGAAGATAAATTTGAAACCGCTTTTGCGTACTGTTCTTGTTTGATCGATCCGTGGTTCTATCGCTTTTCGAACCCACGGTTTGCTGGGAAAGACGGCTGGTGGGAGCTTTTAGAAAGAAGGGTGTTGTGA

Coding sequence (CDS)

ATGGTTCTATTCTATTCTATGCCTCTCGTTTGCATCCACTTTCTGTGTCTCTGGTTTATATTTATGGAGCCCATTGAAATCCCTTGTGTATTGATGCCTTTCCGCCATCGCTGTTGGTTTTCTCTTAGACGTGTTCTTGGTGCCACGCCAGAAGATAAATTTGAAACCGCTTTTGCGTACTGTTCTTGTTTGATCGATCCGTGGTTCTATCGCTTTTCGAACCCACGGTTTGCTGGGAAAGACGGCTGGTGGGAGCTTTTAGAAAGAAGGGTGTTGTGA

Protein sequence

MVLFYSMPLVCIHFLCLWFIFMEPIEIPCVLMPFRHRCWFSLRRVLGATPEDKFETAFAYCSCLIDPWFYRFSNPRFAGKDGWWELLERRVL
Homology
[Close]
BLAST of CmaCh07G004040 vs. NCBI nr
Match: KAG6594752.1 (putative protein phosphatase 2C 60, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 51 EDKFETAFAYCSCLIDPWFYRFSNPRFAGKDG 83
          EDKFETAFAYCSCLIDPWFYRFSNPRFAGKDG
Sbjct: 18 EDKFETAFAYCSCLIDPWFYRFSNPRFAGKDG 49

The following BLAST results are available for this feature:
BLAST of CmaCh07G004040 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004040 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594752.13.2e-11100.00putative protein phosphatase 2C 60, partial [Cucurbita argyrosperma subsp. soror... [more]
BLAST of CmaCh07G004040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G004040.1CmaCh07G004040.1mRNA