CmaCh07G002660 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G002660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 1185885 .. 1186166 (-)
RNA-Seq ExpressionCmaCh07G002660
SyntenyCmaCh07G002660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTGGTGCGAGGCATAGAATGGATGAATGCTTACAGTAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCTCCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

mRNA sequence

ATGGGATTGGTGCGAGGCATAGAATGGATGAATGCTTACAGTAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCTCCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

Coding sequence (CDS)

ATGGGATTGGTGCGAGGCATAGAATGGATGAATGCTTACAGTAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCTCCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

Protein sequence

MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE
Homology
BLAST of CmaCh07G002660 vs. ExPASy TrEMBL
Match: A0A2P6Q3U6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0007481 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-19
Identity = 56/96 (58.33%), Postives = 68/96 (70.83%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGK-RRFNFQYDPCSYALNFDDGFC 60
          MG V  + W+NA  RK+ R LFWRMRAA+K+A+KN GK RRF FQYDP SYALNFDDG  
Sbjct: 3  MGFVGSLSWVNAIGRKKCRSLFWRMRAALKRAMKNSGKQRRFMFQYDPSSYALNFDDGCW 62

Query: 61 KF--EAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE 94
          K          PAK+Q  S++N++ +WV VLLVKSE
Sbjct: 63 KLGEGGACALRPAKLQEHSDINNT-LWVCVLLVKSE 97

BLAST of CmaCh07G002660 vs. ExPASy TrEMBL
Match: A0A0S3S2J0 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G037700 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+   EW+NAYS+K+ R LFWR+RAA+KKA+KNGGK+R  FQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERFEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 FEAVAPEEPAKIQISSNLNHSPMWVFVLLVKS 93
           +     +   ++++   N++   V+VL VK+
Sbjct: 61 AKKFI-GDARLMELTDINNNTTTLVYVLWVKT 91

BLAST of CmaCh07G002660 vs. ExPASy TrEMBL
Match: V7BT41 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189400g PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19
Identity = 50/93 (53.76%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+  +EW+NAYS+K+ R LFWR+RAA+KKA+KNGGK+R  FQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 FEAVAPEEPAKIQISSNLNH-SPMWVFVLLVKS 93
           +    +  A++   +++N+ +   V+VL VK+
Sbjct: 61 AKKFIGD--ARLMELTDINNTTTTLVYVLWVKT 91

BLAST of CmaCh07G002660 vs. ExPASy TrEMBL
Match: A0A6J5WX94 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGLV  + W+NAYSR+Q R LFWRMRAA+KKA+KN GK++  FQYDP SYALNFDDG  K
Sbjct: 1  MGLVGSLVWVNAYSRRQCRSLFWRMRAALKKALKNSGKQQLRFQYDPSSYALNFDDGSWK 60

Query: 61 ----FEAVAPEEPAKIQISSNLN-HSPMWVFVLLVKSE 94
                A+  +   K Q+ S+L+  +  WV+VL V SE
Sbjct: 61 SAQEANALKLKHATKPQLHSDLDVKNTAWVYVLWVVSE 98

BLAST of CmaCh07G002660 vs. ExPASy TrEMBL
Match: A0A2C9U8B6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G023500 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+   EWMN++S+KQ + LFWR++AA+KKA+KNGGK++ NFQYDP SYALNFDDG C 
Sbjct: 1  MGLMGRFEWMNSFSKKQCKSLFWRVKAAVKKAVKNGGKQQVNFQYDPSSYALNFDDGCCH 60

Query: 61 FEAVAPE-EPAKIQISSNLNHSPMWVFVLLVKS 93
          F     E  P K    S   +  +WV+VL V+S
Sbjct: 61 FGREKYEVRPRK----SEDGNKTIWVYVLWVES 89

BLAST of CmaCh07G002660 vs. NCBI nr
Match: KAG6594620.1 (hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 15  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQI 74
           RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQI
Sbjct: 89  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQI 148

Query: 75  SSNLNHSPMWVFVLLVKSE 94
           SSNLNHSPMWVFVLLVKSE
Sbjct: 149 SSNLNHSPMWVFVLLVKSE 167

BLAST of CmaCh07G002660 vs. NCBI nr
Match: KAF3451534.1 (hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+  + W+N YSRK  R LFWR+RAA+KKA+KNGGK++  FQYDPCSYALNFDDG CK
Sbjct: 5  MGLIASLVWVNTYSRKHCRSLFWRVRAALKKAVKNGGKQQIRFQYDPCSYALNFDDGGCK 64

Query: 61 F--EAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE 94
                 P + AK Q  S+  +S  WV+VL VK++
Sbjct: 65 LGEAQTTPSQHAKHQCHSDTKNS-KWVYVLWVKAD 98

BLAST of CmaCh07G002660 vs. NCBI nr
Match: PRQ28852.1 (hypothetical protein RchiOBHm_Chr5g0007481 [Rosa chinensis])

HSP 1 Score: 104.8 bits (260), Expect = 4.2e-19
Identity = 56/96 (58.33%), Postives = 68/96 (70.83%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGK-RRFNFQYDPCSYALNFDDGFC 60
          MG V  + W+NA  RK+ R LFWRMRAA+K+A+KN GK RRF FQYDP SYALNFDDG  
Sbjct: 3  MGFVGSLSWVNAIGRKKCRSLFWRMRAALKRAMKNSGKQRRFMFQYDPSSYALNFDDGCW 62

Query: 61 KF--EAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE 94
          K          PAK+Q  S++N++ +WV VLLVKSE
Sbjct: 63 KLGEGGACALRPAKLQEHSDINNT-LWVCVLLVKSE 97

BLAST of CmaCh07G002660 vs. NCBI nr
Match: BAT87039.1 (hypothetical protein VIGAN_05037700 [Vigna angularis var. angularis])

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-18
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+   EW+NAYS+K+ R LFWR+RAA+KKA+KNGGK+R  FQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERFEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 FEAVAPEEPAKIQISSNLNHSPMWVFVLLVKS 93
           +     +   ++++   N++   V+VL VK+
Sbjct: 61 AKKFI-GDARLMELTDINNNTTTLVYVLWVKT 91

BLAST of CmaCh07G002660 vs. NCBI nr
Match: XP_007148211.1 (hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris] >ESW20205.1 hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris])

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-18
Identity = 50/93 (53.76%), Postives = 70/93 (75.27%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 60
          MGL+  +EW+NAYS+K+ R LFWR+RAA+KKA+KNGGK+R  FQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 FEAVAPEEPAKIQISSNLNH-SPMWVFVLLVKS 93
           +    +  A++   +++N+ +   V+VL VK+
Sbjct: 61 AKKFIGD--ARLMELTDINNTTTTLVYVLWVKT 91

BLAST of CmaCh07G002660 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06
Identity = 30/57 (52.63%), Postives = 36/57 (63.16%), Query Frame = 0

Query: 1  MGLVRGIEWMNAYSRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDG 58
          M L    E +N Y +K FR    RM+AA+KK  K   K++  FQYDP SYALNFDDG
Sbjct: 1  MRLEDRFEAVNQYRKKMFR----RMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P6Q3U62.0e-1958.33Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0007481 PE=4... [more]
A0A0S3S2J05.9e-1953.26Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G... [more]
V7BT415.9e-1953.76Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189400g PE=4 ... [more]
A0A6J5WX941.0e-1855.10Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 S... [more]
A0A2C9U8B61.0e-1854.84Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G023500 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KAG6594620.13.1e-38100.00hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3451534.11.5e-2156.84hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis][more]
PRQ28852.14.2e-1958.33hypothetical protein RchiOBHm_Chr5g0007481 [Rosa chinensis][more]
BAT87039.11.2e-1853.26hypothetical protein VIGAN_05037700 [Vigna angularis var. angularis][more]
XP_007148211.11.2e-1853.76hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris] >ESW20205.1 hypothet... [more]
Match NameE-valueIdentityDescription
AT1G11112.11.5e-0652.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538:SF10OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR34538EXPRESSED PROTEINcoord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G002660.1CmaCh07G002660.1mRNA