CmaCh07G002460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G002460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Cma_Chr07: 1109965 .. 1110693 (+)
RNA-Seq Expression	CmaCh07G002460
Synteny	CmaCh07G002460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTATGAACAGTGCTTTGCGCAAGGATGGAAACACGTCTCTGGTACAGGCGGAACAGATCGAGAAACCTACAAGGGTTGCTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGCGGTCACTTGTACTGCTGGCCTTGCATCTATAAATGGCTTCACGTCAAGAGCGTCTCTCTTGCCATTGATGAGCACCCGCAATGCCCAGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTATGGTCGTGGCCAAATGGCCGAGGAAGTCGGGCCTGAAGCCCAAGCTCTGCATCAAGACAACGTTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATACTTGCTACCCTCAGCACACATCAGCAGCAGCTTCGATATCGAAATCCTTACCAGCGACCAAATCATGACCCCCTTCTTTTTGGCAATTATGAAGAAGATTCGCCAGCTCCTTCGCTAAACCTTGCTAGAACATCGTTCAGTGGTTTTCACCATCCGGTGGTAGGAATGATTGGCGATTTCATGTATGCAAGGGTCTTTGGGAACTCTGACAATTTATACTCTTACCAAAACTCTTATCATCTAACAGGGAGCCGTAGGAACCGGTTGAGAAGACAGGAAATGCAGGCAGAGAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTGTGCGTTCTTGTCTTCTAA

mRNA sequence

ATGGCCTATGAACAGTGCTTTGCGCAAGGATGGAAACACGTCTCTGGTACAGGCGGAACAGATCGAGAAACCTACAAGGGTTGCTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGCGGTCACTTGTACTGCTGGCCTTGCATCTATAAATGGCTTCACGTCAAGAGCGTCTCTCTTGCCATTGATGAGCACCCGCAATGCCCAGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTATGGTCGTGGCCAAATGGCCGAGGAAGTCGGGCCTGAAGCCCAAGCTCTGCATCAAGACAACGTTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATACTTGCTACCCTCAGCACACATCAGCAGCAGCTTCGATATCGAAATCCTTACCAGCGACCAAATCATGACCCCCTTCTTTTTGGCAATTATGAAGAAGATTCGCCAGCTCCTTCGCTAAACCTTGCTAGAACATCGTTCAGTGGTTTTCACCATCCGGTGGTAGGAATGATTGGCGATTTCATGTATGCAAGGGTCTTTGGGAACTCTGACAATTTATACTCTTACCAAAACTCTTATCATCTAACAGGGAGCCGTAGGAACCGGTTGAGAAGACAGGAAATGCAGGCAGAGAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTGTGCGTTCTTGTCTTCTAA

Coding sequence (CDS)

ATGGCCTATGAACAGTGCTTTGCGCAAGGATGGAAACACGTCTCTGGTACAGGCGGAACAGATCGAGAAACCTACAAGGGTTGCTTTGATTGTAACATCTGCTTAGACTTTGCCCATGAGCCAGTGGTTACTCTCTGCGGTCACTTGTACTGCTGGCCTTGCATCTATAAATGGCTTCACGTCAAGAGCGTCTCTCTTGCCATTGATGAGCACCCGCAATGCCCAGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTATGGTCGTGGCCAAATGGCCGAGGAAGTCGGGCCTGAAGCCCAAGCTCTGCATCAAGACAACGTTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATACTTGCTACCCTCAGCACACATCAGCAGCAGCTTCGATATCGAAATCCTTACCAGCGACCAAATCATGACCCCCTTCTTTTTGGCAATTATGAAGAAGATTCGCCAGCTCCTTCGCTAAACCTTGCTAGAACATCGTTCAGTGGTTTTCACCATCCGGTGGTAGGAATGATTGGCGATTTCATGTATGCAAGGGTCTTTGGGAACTCTGACAATTTATACTCTTACCAAAACTCTTATCATCTAACAGGGAGCCGTAGGAACCGGTTGAGAAGACAGGAAATGCAGGCAGAGAAGTCATTGAACAGAATCTCCATTTTCCTCTTCTGCTGTGTAATTCTGTGCGTTCTTGTCTTCTAA

Protein sequence

MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF

Homology

[Close]

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46
Identity = 102/226 (45.13%), Postives = 137/226 (60.62%), Query Frame = 0


Query: 23  ETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSL--AIDEHPQCPVCKAD 82
           E   G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ +SVS   +  + PQCPVCKA+
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 83  ISHTTMVPLYGR-GQMAEEVGPEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRN 142
           +S  T++PLYGR GQ  +    +A  L       PP P   G+ +L T  ++  QL  R 
Sbjct: 93  VSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRR 152

Query: 143 PYQRPN--HDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFGNSD-NL 202
            YQ+ +    P   G+Y     +P L+    + +   H    MIG+  YAR+FGNS   +
Sbjct: 153 GYQQQSQTRQPAYQGSY---MSSPMLSPGGATANMLQH---SMIGEVAYARIFGNSSTTM 212

Query: 203 YSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           Y+Y NSY+L  S   R+RRQ  QA++SL RI  FLFCC + C+++F
Sbjct: 213 YTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

[Close]

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-44
Identity = 101/233 (43.35%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 17  TGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLAIDEHP-QCP 76
           T G   E+  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHV+  S+++D+H   CP
Sbjct: 32  TAGQANES--GCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCP 91

Query: 77  VCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIP--PRPSACGNQI--LATLSTH 136
           VCK++I+ T++VPLYGRG  +      ++     + DIP  P PSA  N I   ++L+  
Sbjct: 92  VCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPS 151

Query: 137 QQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFG 196
            Q       +    + P  F   E      S +LA      F +PV+GM GD +Y R+FG
Sbjct: 152 LQHQTLSPSFHNHQYSPRGFTTTE------STDLANAVMMSFLYPVIGMFGDLVYTRIFG 211

Query: 197 NSDNLYS--YQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
              N  +  YQ+             ++ MQ EKSLNR+SIF  CC+ILC+L+F
Sbjct: 212 TFTNTIAQPYQS-------------QRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 91/222 (40.99%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLA--IDEHPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL V+S S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQ-MAEEVG----PEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRNPY 148
           VPLYGRG+   +E G    P+        +++P  P A  +  L+      Q++ + +P 
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLS------QRVHFNSPQ 165

Query: 149 QRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFGNS-DNLYSYQ 208
           +         G Y       S +L   S+S    PV+ M+G+ +  R+FG    + ++Y 
Sbjct: 166 E---------GYYPVSGVMSSNSL---SYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYP 225

Query: 209 NSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           ++Y+L G+   R+RR+ MQA+KSL RI  F  CCV+LC+L+F
Sbjct: 226 DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 76/224 (33.93%), Postives = 116/224 (51.79%), Query Frame = 0


Query: 27  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVS-LAIDEH------PQCPVCKA 86
           G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 87  DISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRN 146
           D+S  T+VP+YGRGQ A + G           ++P RP+     +        +    R 
Sbjct: 77  DVSEATLVPIYGRGQKAPQSGS----------NVPSRPTGPVYDLRGVGQRLGEGESQRY 136

Query: 147 PYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFG-NSDNLYS 206
            Y+ P+                              PV+G++ + +Y R+FG +S N+  
Sbjct: 137 MYRMPD------------------------------PVMGVVCEMVYRRLFGESSSNMAP 193

Query: 207 YQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           Y++          R RR+ MQAE+SL+R+ +FL C + +C+ +F
Sbjct: 197 YRD-------MNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot
Match: Q99942 (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLAIDEHPQCPVCKADISHTTMVP 88
           F+CNICL+ A E VV++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VP
Sbjct: 25  FECNICLETAREAVVSVCGHLYCWPCLHQWLETR------PERQECPVCKAGISREKVVP 84

Query: 89  LYGRGQMAEEVGPEAQALHQDNVDIPPRP 118
           LYGRG         +Q      +  PPRP
Sbjct: 85  LYGRG---------SQKPQDPRLKTPPRP 98

[Close]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL
Match: A0A6J1KVR4 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496874 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 5.3e-144
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL
Match: A0A6J1EI23 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111433592 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.5e-138
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRET KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDE PQCPVCKADISHTTMVPLYGRGQMAEEV PEA+A+HQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVRPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEED PAPSLNL RTS SGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDLPAPSLNLGRTSLSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL
Match: A0A0A0KK60 (Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-121
Identity = 210/242 (86.78%), Postives = 222/242 (91.74%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQ FAQGWKHVS   GT+RE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVS---GTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           V+S SLAIDEHPQCPVCKADISHTTMVPLYGRGQ AEEV PE +A+H D ++IPPRPSAC
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHD-INIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILAT STHQQQL YRNPYQRPNHDPLLF NYEEDS +P LNLARTSFS FHHPVVGM
Sbjct: 121 GNQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDF++ARVFGNSDNLYSY+NSY LTGS RNRLRRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVL 238

Query: 241 VF 243
           VF
Sbjct: 241 VF 238

[Close]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL
Match: A0A5A7UGP7 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007450 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.8e-121
Identity = 210/242 (86.78%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA++Q FAQGWKHVS   GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           V+S SLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEV  EA+A+H+D ++IPPRPSAC
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRD-INIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILAT STHQQQL YRNPYQRPNHDPLLF NYEE S +P LNLARTSFS FHHPVVGM
Sbjct: 121 GNQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDF++ARVFGNSDNLYSY+NSY LTGS RNRLRRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVL 238

Query: 241 VF 243
           VF
Sbjct: 241 VF 238

[Close]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL
Match: A0A1S3AZB8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.8e-121
Identity = 210/242 (86.78%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA++Q FAQGWKHVS   GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFDQYFAQGWKHVS---GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           V+S SLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEV  EA+A+H+D ++IPPRPSAC
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRD-INIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILAT STHQQQL YRNPYQRPNHDPLLF NYEE S +P LNLARTSFS FHHPVVGM
Sbjct: 121 GNQILATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDF++ARVFGNSDNLYSY+NSY LTGS RNRLRRQEMQ +KSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVL 238

Query: 241 VF 243
           VF
Sbjct: 241 VF 238

[Close]

BLAST of CmaCh07G002460 vs. NCBI nr
Match: XP_023003183.1 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima] >XP_023003184.1 E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 520.0 bits (1338), Expect = 1.1e-143
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. NCBI nr
Match: XP_023517891.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo] >XP_023517893.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.6 bits (1311), Expect = 1.5e-140
Identity = 237/242 (97.93%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRET KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDE PQCPVCKADISHTTMVPLYGRGQMAEEVGPEA+A+HQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNL RTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLGRTSFSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. NCBI nr
Match: KAG7026575.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 505.0 bits (1299), Expect = 3.6e-139
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRET KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDE PQCPVCKADISHTTMVPLYGRGQMAEEVGPEA+A+HQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEED PAPSLNL RTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDLPAPSLNLGRTSFSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRL RQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLTRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. NCBI nr
Match: XP_022926438.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926439.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926440.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata])

HSP 1 Score: 501.9 bits (1291), Expect = 3.1e-138
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRET KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDE PQCPVCKADISHTTMVPLYGRGQMAEEV PEA+A+HQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVRPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEED PAPSLNL RTS SGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDLPAPSLNLGRTSLSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240

Query: 241 VF 243
           VF
Sbjct: 241 VF 242

[Close]

BLAST of CmaCh07G002460 vs. NCBI nr
Match: KAG6594605.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.9 bits (1278), Expect = 9.9e-137
Identity = 231/242 (95.45%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MAYEQCFAQGWKHVSGTGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MAYEQCFAQGWKHVSGTGGTDRET KGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAYEQCFAQGWKHVSGTGGTDRETNKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VKSVSLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSAC 120
           VKSVSLAIDE PQCPVCKADISHTTMVPLYGRGQMAEEVGPEA+A+HQDNVDIPPRPSAC
Sbjct: 61  VKSVSLAIDEQPQCPVCKADISHTTMVPLYGRGQMAEEVGPEAKAMHQDNVDIPPRPSAC 120

Query: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGM 180
           GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNL RTSFSGFHHPVVGM
Sbjct: 121 GNQILATLSTHQQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLGRTSFSGFHHPVVGM 180

Query: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVL 240
           IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCC +   L
Sbjct: 181 IGDFMYARVFGNSDNLYSYQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCKLHICL 240

Query: 241 VF 243
           +F
Sbjct: 241 LF 242

[Close]

BLAST of CmaCh07G002460 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-45
Identity = 101/233 (43.35%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 17  TGGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLAIDEHP-QCP 76
           T G   E+  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHV+  S+++D+H   CP
Sbjct: 32  TAGQANES--GCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCP 91

Query: 77  VCKADISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIP--PRPSACGNQI--LATLSTH 136
           VCK++I+ T++VPLYGRG  +      ++     + DIP  P PSA  N I   ++L+  
Sbjct: 92  VCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPS 151

Query: 137 QQQLRYRNPYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFG 196
            Q       +    + P  F   E      S +LA      F +PV+GM GD +Y R+FG
Sbjct: 152 LQHQTLSPSFHNHQYSPRGFTTTE------STDLANAVMMSFLYPVIGMFGDLVYTRIFG 211

Query: 197 NSDNLYS--YQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
              N  +  YQ+             ++ MQ EKSLNR+SIF  CC+ILC+L+F
Sbjct: 212 TFTNTIAQPYQS-------------QRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CmaCh07G002460 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 91/222 (40.99%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLA--IDEHPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL V+S S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQ-MAEEVG----PEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRNPY 148
           VPLYGRG+   +E G    P+        +++P  P A  +  L+      Q++ + +P 
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLS------QRVHFNSPQ 165

Query: 149 QRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFGNS-DNLYSYQ 208
           +         G Y       S +L   S+S    PV+ M+G+ +  R+FG    + ++Y 
Sbjct: 166 E---------GYYPVSGVMSSNSL---SYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYP 225

Query: 209 NSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           ++Y+L G+   R+RR+ MQA+KSL RI  F  CCV+LC+L+F
Sbjct: 226 DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh07G002460 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 91/222 (40.99%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLA--IDEHPQCPVCKADISHTTM 88
           FDCNICLD   EPVVTLCGHL+CWPCI+KWL V+S S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 89  VPLYGRGQ-MAEEVG----PEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRNPY 148
           VPLYGRG+   +E G    P+        +++P  P A  +  L+      Q++ + +P 
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLS------QRVHFNSPQ 165

Query: 149 QRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFGNS-DNLYSYQ 208
           +         G Y       S +L   S+S    PV+ M+G+ +  R+FG    + ++Y 
Sbjct: 166 E---------GYYPVSGVMSSNSL---SYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYP 225

Query: 209 NSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           ++Y+L G+   R+RR+ MQA+KSL RI  F  CCV+LC+L+F
Sbjct: 226 DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh07G002460 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-30
Identity = 76/224 (33.93%), Postives = 116/224 (51.79%), Query Frame = 0


Query: 27  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVS-LAIDEH------PQCPVCKA 86
           G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 87  DISHTTMVPLYGRGQMAEEVGPEAQALHQDNVDIPPRPSACGNQILATLSTHQQQLRYRN 146
           D+S  T+VP+YGRGQ A + G           ++P RP+     +        +    R 
Sbjct: 77  DVSEATLVPIYGRGQKAPQSGS----------NVPSRPTGPVYDLRGVGQRLGEGESQRY 136

Query: 147 PYQRPNHDPLLFGNYEEDSPAPSLNLARTSFSGFHHPVVGMIGDFMYARVFG-NSDNLYS 206
            Y+ P+                              PV+G++ + +Y R+FG +S N+  
Sbjct: 137 MYRMPD------------------------------PVMGVVCEMVYRRLFGESSSNMAP 193

Query: 207 YQNSYHLTGSRRNRLRRQEMQAEKSLNRISIFLFCCVILCVLVF 243
           Y++          R RR+ MQAE+SL+R+ +FL C + +C+ +F
Sbjct: 197 YRD-------MNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CmaCh07G002460 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.8e-23
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 29  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVKSVSLAIDEHPQCPVCKADISHTTMVP 88
           F+CNICLD A +P+VTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VP
Sbjct: 21  FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCPVCKAVIEEDRLVP 80

Query: 89  LYGRGQMAEEVGPEAQALHQDNVDIPPRPS 119
           LYGRG+ + +  P ++++    +++P RPS
Sbjct: 81  LYGRGKSSAD--PRSKSI--PGLEVPNRPS 100

The following BLAST results are available for this feature:

BLAST of CmaCh07G002460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	2.2e-46	45.13	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	2.7e-44	43.35	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	1.4e-37	40.99	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	1.2e-28	33.93	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q99942	3.3e-18	47.19	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]

BLAST of CmaCh07G002460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVR4	5.3e-144	100.00	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1EI23	1.5e-138	96.69	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KK60	2.2e-121	86.78	Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1	[more]
A0A5A7UGP7	4.8e-121	86.78	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AZB8	4.8e-121	86.78	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 ...	[more]

BLAST of CmaCh07G002460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003183.1	1.1e-143	100.00	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 [Cucurbita maxima] >XP_023003...	[more]
XP_023517891.1	1.5e-140	97.93	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo] >XP_0235178...	[more]
KAG7026575.1	3.6e-139	97.11	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022926438.1	3.1e-138	96.69	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022926439.1 E3 ...	[more]
KAG6594605.1	9.9e-137	95.45	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of CmaCh07G002460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	1.9e-45	43.35	RING membrane-anchor 3	[more]
AT4G03510.1	1.0e-38	40.99	RING membrane-anchor 1	[more]
AT4G03510.2	1.0e-38	40.99	RING membrane-anchor 1	[more]
AT4G28270.1	8.6e-30	33.93	RING membrane-anchor 2	[more]
AT1G19310.1	7.8e-23	51.11	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 31..77 e-value: 1.7E-8 score: 44.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 31..78 score: 12.459772
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 31..77 e-value: 3.9E-8 score: 33.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 16..138 e-value: 1.0E-16 score: 62.7
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 2..242
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 29..79 e-value: 1.00759E-24 score: 90.4411
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 25..97
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..242
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 46..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G002460.1	CmaCh07G002460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity