CmaCh07G002340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G002340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	dof zinc finger protein DOF5.6-like
Location	Cma_Chr07: 1078726 .. 1080088 (-)
RNA-Seq Expression	CmaCh07G002340
Synteny	CmaCh07G002340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACGTTCGGAAAGAGAAAGAAAAGGATCAATCGCCACCACTCCGCATCCATCTACCGCCGCCGCCGCCCCTGATCGCCCCCAGAATCCAACATATCCGTTTACGTAACAAAATGAAATCTTGTGCTTTTTCGTTTGAATTTATGTGAGGATCCCTTCTGGATTGGATGTGTGTTTTTTTTCAGACCATCATTTATTTTCAGCTCAATAATGTCTGCCGTACTTCTGTGTCTCTGAAACTAAATATAATTTCGCAAAATTTCAGTATCTTTTTTTAATTTTTTTTTTCTCGTAATAAAATTAAAAACCCCATCTTGTGTTAGAAAACCCTAGCTGATTCATGCAGAGAAGTGGGAAGTTGTTGAAGCCTAAAACGCTCTCCATTTAGTATTTCTCTAAGATCCCAAAAAACCCTTTTCGTTTCAAATCGATTGGTTGAGAGATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAACCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCAAGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGCGGCTGCCGGAAGGGTAAACGACCCAAACAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGCTGCCATCACTCCCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCACCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGGTGAGCAAGATTAGAATTTGACCTTAATTTAGTTTTTAAAAAAATCTCTTCTTTTTTCAGTATTTTTTTGAATCAATTTCTCCGTCCTCCCTATTTTGTTGGAATCGTGGAATAAAAAGAGATGGAATTTTTATGATGCAGTTGGAGAATTGGGGTCATCTTCGAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCAGAAGTAATCTACGAAATAATGGACCAATCATCAGGGAAAGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATGGCCGCTGCCGGAGAGAACCTTGTTTGGACACCCAACAACAACAACAACGATACCCCCACGACCACCGCAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGAAGGGATTCGATCCACCCCCATGACATGATCGATCACAAATCAGTGGAATTCGATTCTTTCTTTTCAAAAAAAA

mRNA sequence

AGAAACGTTCGGAAAGAGAAAGAAAAGGATCAATCGCCACCACTCCGCATCCATCTACCGCCGCCGCCGCCCCTGATCGCCCCCAGAATCCAACATATCCGTTTACGTAACAAAATGAAATCTTGTGCTTTTTCGTTTGAATTTATGTGAGGATCCCTTCTGGATTGGATGTGTGTTTTTTTTCAGACCATCATTTATTTTCAGCTCAATAATGTCTGCCGTACTTCTGTGTCTCTGAAACTAAATATAATTTCGCAAAATTTCAGTATCTTTTTTTAATTTTTTTTTTCTCGTAATAAAATTAAAAACCCCATCTTGTGTTAGAAAACCCTAGCTGATTCATGCAGAGAAGTGGGAAGTTGTTGAAGCCTAAAACGCTCTCCATTTAGTATTTCTCTAAGATCCCAAAAAACCCTTTTCGTTTCAAATCGATTGGTTGAGAGATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAACCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCAAGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGCGGCTGCCGGAAGGGTAAACGACCCAAACAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGCTGCCATCACTCCCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCACCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCGAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCAGAAGTAATCTACGAAATAATGGACCAATCATCAGGGAAAGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATGGCCGCTGCCGGAGAGAACCTTGTTTGGACACCCAACAACAACAACAACGATACCCCCACGACCACCGCAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGAAGGGATTCGATCCACCCCCATGACATGATCGATCACAAATCAGTGGAATTCGATTCTTTCTTTTCAAAAAAAA

Coding sequence (CDS)

ATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAACCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCAAGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGCGGCTGCCGGAAGGGTAAACGACCCAAACAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGCTGCCATCACTCCCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCACCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCGAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCAGAAGTAATCTACGAAATAATGGACCAATCATCAGGGAAAGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATGGCCGCTGCCGGAGAGAACCTTGTTTGGACACCCAACAACAACAACAACGATACCCCCACGACCACCGCAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGAAGGGATTCGATCCACCCCCATGA

Protein sequence

MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQAGWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDPPP

Homology

[Close]

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 56/87 (64.37%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9   DRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT+GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-25
Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 22  QPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRK 81
           +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT+GGTLRN+PVGGGCRK
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 82  GKRPKQSSHSSDNSNSQP 96
            KR   S+  S  +  +P
Sbjct: 107 NKRSTSSAARSLRTTPEP 124

[Close]

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 16 QPQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 75
          Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 16 QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 76 CRKGKRPKQSSHSSDNSNS 94
           RK KR K+ S ++  + S
Sbjct: 76 YRKNKRVKRPSTATTTTAS 94

[Close]

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 9   DRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 68
           +  +K    + +   + Q CPRC+S NTKFCYYNNYSLSQPRY CK+CRRYWT+GGTLRN
Sbjct: 31  EEEMKKKVSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRN 90

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSN-SQPLPSLPLPQIVQSSLTTTPPPVIF 119
           VPVGGGCR+ KR   S+ S +N+N S    + PL    Q+ L T  PP  F
Sbjct: 91  VPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPL----QNPLITGMPPSSF 137

[Close]

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot
Match: O80928 (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 50/76 (65.79%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 19  NQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRK 78
           N A P+   KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT+GG LRNVPVGGGCR+
Sbjct: 81  NVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 140

Query: 79  GKRPKQSSHSSDNSNS 94
            +R K +S++++NS +
Sbjct: 141 NRRTKSNSNNNNNSTA 156

[Close]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1KP01 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP 240
           GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP
Sbjct: 181 GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP 240

Query: 241 PP 243
           PP
Sbjct: 241 PP 242

[Close]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL
Match: A0A6J1EHW0 (dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111433543 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 229/244 (93.85%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IYE+MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPM-AAAGENLVWTP-NNNNNDTPTTTAGNPTNNSTTINQWPDYMKGF 240
           GWSESYINNYISNP+ AAAGEN+VWTP NNNNN+T     GNPTNNSTTINQWPDYM GF
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240

Query: 241 DPPP 243
           DPPP
Sbjct: 241 DPPP 244

[Close]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL
Match: A0A5A7UGN7 (Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007560 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.7e-78
Identity = 173/246 (70.33%), Postives = 186/246 (75.61%), Query Frame = 0


Query: 8   QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNS--------QPLPSLPLPQIVQSSL-TTTPPPVIF 127
           NVPVGGGCRKGKR KQSS SS+N++S           P LP PQIV  SL TTT   VIF
Sbjct: 64  NVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHVIF 123

Query: 128 SGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKA-AVSSS 187
           SGTPVITP SFFN  GEL SSSSW+NSFGSS      Q PE+IY++MDQSSGKA A SSS
Sbjct: 124 SGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANSSS 183

Query: 188 SQAGWSESYI-NNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMK 243
             AGWSESYI NN ISNPMAA G+ +VW    NN     T A   T N+ TINQWPDYM 
Sbjct: 184 PAAGWSESYINNNSISNPMAATGDAVVWPAGENN----ATLAAATTTNNATINQWPDYMP 240

[Close]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL
Match: A0A1S3B0F1 (dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 5.0e-78
Identity = 172/246 (69.92%), Postives = 186/246 (75.61%), Query Frame = 0


Query: 8   QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNS--------QPLPSLPLPQIVQSSL-TTTPPPVIF 127
           NVPVGGGCRKGKR KQSS SS+N++S           P LP PQIV  SL TTT   VIF
Sbjct: 64  NVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHVIF 123

Query: 128 SGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKA-AVSSS 187
           SGTPVITP SFFN  GEL SSSSW+NSFGSS      Q PE+IY++MDQSSGKA A SSS
Sbjct: 124 SGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANSSS 183

Query: 188 SQAGWSESYI-NNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMK 243
             AGWSESYI NN ISNPMAA G+ +VW    NN     T A   + N+ TINQWPDYM 
Sbjct: 184 PAAGWSESYINNNSISNPMAATGDAVVWPAGENN----ATLAAATSTNNATINQWPDYMP 240

[Close]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL
Match: A0A0A0KLH8 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 171/243 (70.37%), Postives = 186/243 (76.54%), Query Frame = 0


Query: 8   QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPL-----PSLPLPQIVQSSL-TTTPPPVIFSGT 127
           NVPVGGGCRKGKR KQ S SS+NS+ +PL       LP PQIV  SL TTT   VI+SGT
Sbjct: 64  NVPVGGGCRKGKRLKQPSQSSNNSSVKPLVQTSASPLPPPQIVPLSLSTTTSQHVIYSGT 123

Query: 128 PVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKA-AVSSSSQA 187
           PVITP SFFN  GEL SSSSW++SFGSS      Q PE+IY++MDQSSGKA A SSS  A
Sbjct: 124 PVITPPSFFNSGGELLSSSSWISSFGSSS-----QGPEIIYDMMDQSSGKADANSSSPAA 183

Query: 188 GWSESYI-NNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFD 243
           GWSESYI NN ISNP+AA G+ +VW    NNN    T A   T N  TINQWPDYM GF 
Sbjct: 184 GWSESYINNNSISNPIAATGDAVVWPAGENNN---ATLAAATTTNIATINQWPDYMPGFC 238

[Close]

BLAST of CmaCh07G002340 vs. NCBI nr
Match: XP_023003351.1 (dof zinc finger protein DOF5.6-like [Cucurbita maxima])

HSP 1 Score: 487.6 bits (1254), Expect = 6.0e-134
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP 240
           GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP
Sbjct: 181 GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP 240

Query: 241 PP 243
           PP
Sbjct: 241 PP 242

[Close]

BLAST of CmaCh07G002340 vs. NCBI nr
Match: KAG7026567.1 (Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 231/243 (95.06%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IYE+MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPM-AAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFD 240
           GWSESYINNYISNP+ AAAGEN+VWTPNNNNNDT T   GNPTNNSTTINQWPDYM GFD
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNDTATAATGNPTNNSTTINQWPDYMAGFD 240

Query: 241 PPP 243
           PPP
Sbjct: 241 PPP 243

[Close]

BLAST of CmaCh07G002340 vs. NCBI nr
Match: XP_022926378.1 (dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454.5 bits (1168), Expect = 5.6e-124
Identity = 229/244 (93.85%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           T GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  THGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IYE+MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPM-AAAGENLVWTP-NNNNNDTPTTTAGNPTNNSTTINQWPDYMKGF 240
           GWSESYINNYISNP+ AAAGEN+VWTP NNNNN+T     GNPTNNSTTINQWPDYM GF
Sbjct: 181 GWSESYINNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAGF 240

Query: 241 DPPP 243
           DPPP
Sbjct: 241 DPPP 244

[Close]

BLAST of CmaCh07G002340 vs. NCBI nr
Match: XP_023517464.1 (dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 225/242 (92.98%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MQRGRDDQDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60
           MQRGRDDQDRRLKALQ QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW
Sbjct: 1   MQRGRDDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYW 60

Query: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSG 120
           TQGGTLRNVPVGGGCRKGKRPKQSSHSS+NSNSQ     PLPQIVQSSLTTTPPPVIFSG
Sbjct: 61  TQGGTLRNVPVGGGCRKGKRPKQSSHSSNNSNSQ-----PLPQIVQSSLTTTPPPVIFSG 120

Query: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSSQA 180
           TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPE+IY++MDQSSGKAAVSSSSQA
Sbjct: 121 TPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYDMMDQSSGKAAVSSSSQA 180

Query: 181 GWSESYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDP 240
           GWSESYINNYISNP+AAAGEN++WTPNNNNNDT TT AGNPTN+STTINQWPDYM GFDP
Sbjct: 181 GWSESYINNYISNPIAAAGENIIWTPNNNNNDTATTIAGNPTNDSTTINQWPDYMTGFDP 237

Query: 241 PP 243
           PP
Sbjct: 241 PP 237

[Close]

BLAST of CmaCh07G002340 vs. NCBI nr
Match: XP_038882844.1 (dof zinc finger protein DOF1.4-like [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.8e-85
Identity = 175/238 (73.53%), Postives = 190/238 (79.83%), Query Frame = 0


Query: 8   QDRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWT GGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDN--SNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVIT 127
           NVPVGGGCRKGKRPKQSS SS+    + QP PSLP P  +  + TTT   VIFSGTPVIT
Sbjct: 64  NVPVGGGCRKGKRPKQSSQSSNTIVKSLQPSPSLPPPLPLSLTSTTTSQHVIFSGTPVIT 123

Query: 128 PSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEVIYEIMDQSSGKAAVSSSS-QAGWSE 187
           P SFFNP G+L SSSSW+NSFGSS+GQ  IQP E+IYE+M QSSGKAAVSSSS  AGW E
Sbjct: 124 PPSFFNPGGDLLSSSSWINSFGSSEGQCQIQPQEIIYEMMGQSSGKAAVSSSSPPAGWPE 183

Query: 188 SYINNYISNPMAAAGENLVWTPNNNNNDTPTTTAGNPTNNSTTINQWPDYMKGFDPPP 243
           SYINN ISNPMAAAG+ +VW   NNN     TT    T N+ T NQWPDYM GF PPP
Sbjct: 184 SYINNSISNPMAAAGDAIVWPAGNNNTAATATT----TANNATTNQWPDYMPGFCPPP 237

[Close]

BLAST of CmaCh07G002340 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 118.2 bits (295), Expect = 8.9e-27
Identity = 56/87 (64.37%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9   DRRLKALQPQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT+GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]

BLAST of CmaCh07G002340 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 115.9 bits (289), Expect = 4.4e-26
Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 22  QPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRK 81
           +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT+GGTLRN+PVGGGCRK
Sbjct: 47  RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRK 106

Query: 82  GKRPKQSSHSSDNSNSQP 96
            KR   S+  S  +  +P
Sbjct: 107 NKRSTSSAARSLRTTPEP 124

[Close]

BLAST of CmaCh07G002340 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.5e-26
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 16 QPQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 75
          Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 16 QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 76 CRKGKRPKQSSHSSDNSNS 94
           RK KR K+ S ++  + S
Sbjct: 76 YRKNKRVKRPSTATTTTAS 94

[Close]

BLAST of CmaCh07G002340 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.5e-26
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 16  QPQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGG 75
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT+GGTLRNVPVGG 
Sbjct: 30  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 89

Query: 76  CRKGKRPKQSSHSSDNSNS 94
            RK KR K+ S ++  + S
Sbjct: 90  YRKNKRVKRPSTATTTTAS 108

[Close]

BLAST of CmaCh07G002340 vs. TAIR 10
Match: AT2G37590.1 (DNA binding with one finger 2.4 )

HSP 1 Score: 114.8 bits (286), Expect = 9.9e-26
Identity = 50/76 (65.79%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 19  NQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRK 78
           N A P+   KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT+GG LRNVPVGGGCR+
Sbjct: 81  NVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 140

Query: 79  GKRPKQSSHSSDNSNS 94
            +R K +S++++NS +
Sbjct: 141 NRRTKSNSNNNNNSTA 156

The following BLAST results are available for this feature:

BLAST of CmaCh07G002340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDR0	1.3e-25	64.37	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q84TE9	6.2e-25	66.67	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q9FZA4	1.1e-24	69.62	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
Q8LE43	1.4e-24	54.95	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]
O80928	1.4e-24	65.79	Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV...	[more]

BLAST of CmaCh07G002340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP01	2.9e-134	100.00	dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496983 ...	[more]
A0A6J1EHW0	2.7e-124	93.85	dof zinc finger protein DOF5.6-like OS=Cucurbita moschata OX=3662 GN=LOC11143354...	[more]
A0A5A7UGN7	1.7e-78	70.33	Dof zinc finger protein DOF1.4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B0F1	5.0e-78	69.92	dof zinc finger protein DOF1.4-like OS=Cucumis melo OX=3656 GN=LOC103484513 PE=4...	[more]
A0A0A0KLH8	1.1e-77	70.37	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517940 PE...	[more]

BLAST of CmaCh07G002340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003351.1	6.0e-134	100.00	dof zinc finger protein DOF5.6-like [Cucurbita maxima]	[more]
KAG7026567.1	1.2e-126	95.06	Dof zinc finger protein DOF5.4, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022926378.1	5.6e-124	93.85	dof zinc finger protein DOF5.6-like [Cucurbita moschata] >KAG6594596.1 Dof zinc ...	[more]
XP_023517464.1	2.8e-123	92.98	dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo]	[more]
XP_038882844.1	1.8e-85	73.53	dof zinc finger protein DOF1.4-like [Benincasa hispida]	[more]

BLAST of CmaCh07G002340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60850.1	8.9e-27	64.37	OBF binding protein 4	[more]
AT5G60200.1	4.4e-26	66.67	TARGET OF MONOPTEROS 6	[more]
AT1G28310.1	7.5e-26	69.62	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	7.5e-26	69.62	Dof-type zinc finger DNA-binding family protein	[more]
AT2G37590.1	9.9e-26	65.79	DNA binding with one finger 2.4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 25..80 e-value: 1.9E-32 score: 111.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 28..64
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 26..80 score: 28.388029
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..101
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 15..142
None	No IPR available	PANTHER	PTHR31992:SF108	DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1	coord: 15..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G002340.1	CmaCh07G002340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding