CmaCh07G002210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G002210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein E6-like
LocationCma_Chr07: 1031441 .. 1032298 (+)
RNA-Seq ExpressionCmaCh07G002210
SyntenyCmaCh07G002210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCAACACAGTCGACCCTTTAACAAACTCAGAAAAAACCACCTCCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGTCACGAATCCACCCAATTCTCTCCTTCCGACTCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTACTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAACCGACGACAAAGCTTCCAAAACACCCTCCTTTCTCGAGACGAGTACACAACAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGAGGACGACAACAACAACAACAATTTCTACGTCAACAACCGCAACGACAATGAGAATAATGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAGCCTCAGCATCAAAGCAGGCCGAGCAGGAATAATTTCAGAAACAACAACTACAACAACTACAACACGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAGGAGGAATCCGATGAGTTCGTGCCATAA

mRNA sequence

ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCAACACAGTCGACCCTTTAACAAACTCAGAAAAAACCACCTCCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGTCACGAATCCACCCAATTCTCTCCTTCCGACTCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTACTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAACCGACGACAAAGCTTCCAAAACACCCTCCTTTCTCGAGACGAGTACACAACAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGAGGACGACAACAACAACAACAATTTCTACGTCAACAACCGCAACGACAATGAGAATAATGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAGCCTCAGCATCAAAGCAGGCCGAGCAGGAATAATTTCAGAAACAACAACTACAACAACTACAACACGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAGGAGGAATCCGATGAGTTCGTGCCATAA

Coding sequence (CDS)

ATGGCTTCCTCAACCAAGCTCCTTTCTCTTTTTCTTCTCAGTCTTTTCTTCATTCAAATCCATGGCAGAGAAAGCAACTTCTTCAGCAAAGTACCCAACAACAATGGCGAAACCCAAATCCCCAACACAGTCGACCCTTTAACAAACTCAGAAAAAACCACCTCCCCACAAGATCAAGACCCCAATTTTATCCCTCAAACCCAAGACAACGGCTACGGTCTCTACGGTCACGAATCCACCCAATTCTCTCCTTCCGACTCTAAATTCTCCGATCCCAACGCTAGAACCGGCGGCCGACCATTTACTACCACCACTACCTACGATGACGGCGAGAACAACTACAAAAGAAACGACGACGTTTCTTACAAATCTGAGTCAGAGGAGTACTACAACTACAACAACAATTACAACAACGACAATTTCCAAAACAGCAACTGGAAAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAACCGACGACAAAGCTTCCAAAACACCCTCCTTTCTCGAGACGAGTACACAACAACAACAACAACTCCTTCATACGACGAGGAAAAATACAACGAGGACGACAACAACAACAACAATTTCTACGTCAACAACCGCAACGACAATGAGAATAATGTGGCGCGACAAGGGATGAGCGACACGAGATTCATGGAGAACGGAAAGTACTTTTATGACCTCAACAGGGAGCCTCAGCATCAAAGCAGGCCGAGCAGGAATAATTTCAGAAACAACAACTACAACAACTACAACACGTACGAATACGGTAATTCCATGGGAAGGTATCAGAATGATGAGACAGAATTCCAGGAGGAATCCGATGAGTTCGTGCCATAA

Protein sequence

MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQDPNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQHQSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP
Homology
BLAST of CmaCh07G002210 vs. ExPASy Swiss-Prot
Match: Q01197 (Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.3e-23
Identity = 106/299 (35.45%), Postives = 144/299 (48.16%), Query Frame = 0

Query: 1   MASSTKLLS---LFLLSLFFIQIHGRESNFFSKVPN---NNGETQIPNTVDPLTNSEKTT 60
           MASS KL S   LFL +LF +QIH RE  +FSK P    N  ET            + T 
Sbjct: 1   MASSPKLFSMSILFLFALFSMQIHARE--YFSKFPRVNINEKETTTREQKHETFVPQTTQ 60

Query: 61  SPQDQDPNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNY 120
            P++Q+P FIP+TQ NGYGLYGHES    PS               FTT  TY+      
Sbjct: 61  KPEEQEPRFIPETQ-NGYGLYGHESGSSRPS---------------FTTKETYEPYVTPV 120

Query: 121 KRNDDVSYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLS 180
           + + D  Y S  E     +NN               ++++YYNK+ Y++ +Q      + 
Sbjct: 121 RFHPDEPYNSIPES----SNN---------------KDTYYYNKNAYESTKQQNLGEAI- 180

Query: 181 RDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDL 240
                       + E+ ++  +N NNN+Y  N N+  NN  +QGMSDTR++ENGKY+YD+
Sbjct: 181 ------------FTEKGWSTKENQNNNYY--NGNNGYNNGEKQGMSDTRYLENGKYYYDV 238

Query: 241 --------NREPQHQSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
                   NR    +   SRN F  N YNN         MGRY  ++ EF+E  +EF P
Sbjct: 241 KSENNYYPNRFDNSRGVASRNEFNENRYNN---------MGRYHQNQEEFEESEEEFEP 238

BLAST of CmaCh07G002210 vs. ExPASy TrEMBL
Match: A0A6J1KXL8 (protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111497261 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.0e-154
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180

Query: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 285

BLAST of CmaCh07G002210 vs. ExPASy TrEMBL
Match: A0A6J1EM79 (protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.6e-142
Identity = 271/286 (94.76%), Postives = 277/286 (96.85%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLTNSEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEY-T 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY T
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAT 180

Query: 181 TTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQ 240
           TTTTTPSYDEEKYN DDNNNNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDL+REPQ
Sbjct: 181 TTTTTPSYDEEKYN-DDNNNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLHREPQ 240

Query: 241 HQSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           HQSR SRNNFRNN  NNYNTYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 HQSRSSRNNFRNN--NNYNTYEYGNSMGRYQNDETEFQEESDEFVP 283

BLAST of CmaCh07G002210 vs. ExPASy TrEMBL
Match: A0A5D3CMI3 (Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 4.0e-82
Identity = 210/309 (67.96%), Postives = 230/309 (74.43%), Query Frame = 0

Query: 1   MASSTKLL-SLFLLSLFFIQIHGRESN-FFSKVPNNN----------GETQIPN--TVDP 60
           MASS KL  S+ +L+L FIQIH RES  FFSK+PNNN           ETQIPN   VDP
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVHNNNNNFDAKETQIPNDENVDP 60

Query: 61  LTNSEK-TTSPQDQDPNFIPQTQDNGYGLYGHESTQFSP-SDSKFSDPNARTGGRPFTTT 120
           LTN EK TTSPQDQ PNFIPQTQDNGYGLYGHES Q  P SDSKF   N+R  GR FTTT
Sbjct: 61  LTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTTT 120

Query: 121 TTYDDGENNYKRNDDVS-YKSESEEYYNYNNNYNNDNFQ---NSNWKKPYENSFYYNKDL 180
           TTYD+ +N + RND VS YKSESEEYYNY +N NN+NFQ   NSN  KPYENSFYYNKDL
Sbjct: 121 TTYDNNDNKF-RNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSN-SKPYENSFYYNKDL 180

Query: 181 YDNRRQSFQNTLLSRDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMS 240
           YDN RQSFQNT LSRD+Y   TTTP YD+ KY+   N+NN     + N+N NN+ RQGMS
Sbjct: 181 YDNGRQSFQNTRLSRDDY---TTTPLYDQGKYDNFYNSNNG--GGDNNNNGNNMVRQGMS 240

Query: 241 DTRFMENGKYFYDLNREPQHQSRPSRNNFRN--NNYNNYNTYEYGNSMGRY--QNDETEF 286
           DTRFMENGKY+YDL+REP H SR SR  F N  NN NN N+YEYGNSMGRY  QNDE EF
Sbjct: 241 DTRFMENGKYYYDLDREPHHYSR-SRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAEF 300

BLAST of CmaCh07G002210 vs. ExPASy TrEMBL
Match: A0A1S3B2M6 (protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 5.2e-82
Identity = 210/310 (67.74%), Postives = 230/310 (74.19%), Query Frame = 0

Query: 1   MASSTKLL-SLFLLSLFFIQIHGRESN-FFSKVPNNN-----------GETQIPN--TVD 60
           MASS KL  S+ +L+L FIQIH RES  FFSK+PNNN            ETQIPN   VD
Sbjct: 1   MASSPKLFTSILILTLLFIQIHARESKYFFSKIPNNNVDNNNNNNFDAKETQIPNDENVD 60

Query: 61  PLTNSEK-TTSPQDQDPNFIPQTQDNGYGLYGHESTQFSP-SDSKFSDPNARTGGRPFTT 120
           PLTN EK TTSPQDQ PNFIPQTQDNGYGLYGHES Q  P SDSKF   N+R  GR FTT
Sbjct: 61  PLTNPEKTTTSPQDQQPNFIPQTQDNGYGLYGHESGQLPPNSDSKFFSDNSRENGRSFTT 120

Query: 121 TTTYDDGENNYKRNDDVS-YKSESEEYYNYNNNYNNDNFQ---NSNWKKPYENSFYYNKD 180
           TTTYD+ +N + RND VS YKSESEEYYNY +N NN+NFQ   NSN  KPYENSFYYNKD
Sbjct: 121 TTTYDNNDNKF-RNDVVSNYKSESEEYYNYEDNNNNNNFQTFENSN-SKPYENSFYYNKD 180

Query: 181 LYDNRRQSFQNTLLSRDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGM 240
           LYDN RQSFQNT LSRD+Y   TTTP YD+ KY+   N+NN     + N+N NN+ RQGM
Sbjct: 181 LYDNGRQSFQNTRLSRDDY---TTTPLYDQGKYDNFYNSNNG--GGDNNNNGNNMVRQGM 240

Query: 241 SDTRFMENGKYFYDLNREPQHQSRPSRNNFRN--NNYNNYNTYEYGNSMGRY--QNDETE 286
           SDTRFMENGKY+YDL+REP H SR SR  F N  NN NN N+YEYGNSMGRY  QNDE E
Sbjct: 241 SDTRFMENGKYYYDLDREPHHYSR-SRGYFGNNINNNNNRNSYEYGNSMGRYQNQNDEAE 300

BLAST of CmaCh07G002210 vs. ExPASy TrEMBL
Match: A0A0A0KLJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518090 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 4.4e-81
Identity = 201/305 (65.90%), Postives = 224/305 (73.44%), Query Frame = 0

Query: 1   MASS-TKLLSLFLLSLFFIQIHGRESN-FFSKVPNNN-------GETQIPN--TVDPLTN 60
           MASS T   S+ +L+LFF+QIH RES  FFSK+PNNN        ETQI N   VDPLTN
Sbjct: 1   MASSPTLFTSILILTLFFLQIHARESKYFFSKIPNNNVDNNFDAKETQITNDEKVDPLTN 60

Query: 61  SEKTT--SPQDQDPNFIPQTQDNGYGLYGHESTQFSP-SDSKFSDPNARTGGRPFTTTTT 120
            EKTT  S  +Q PNFIPQTQDNGYGLYGHES Q  P S+SKF   N R  GR FTTTTT
Sbjct: 61  PEKTTTSSQNNQQPNFIPQTQDNGYGLYGHESGQLPPNSNSKFFSQNGRENGRSFTTTTT 120

Query: 121 Y-DDGENNYKRNDDVS-YKSESEEYYNYNNNYNNDNFQ--NSNWKKPYENSFYYNKDLYD 180
           Y DD +NN  +ND VS YKSESEEYYNY+ + NN+NFQ   ++  KPY+NSFYYNKDLYD
Sbjct: 121 YNDDDDNNKFKNDVVSNYKSESEEYYNYDEDNNNNNFQTFENSGSKPYKNSFYYNKDLYD 180

Query: 181 NRRQSFQNTLLSRDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDT 240
           N RQSF N  LSRD+Y   TTTP YD+ KY+   +NN +   NN NDN NNV RQGMSDT
Sbjct: 181 NGRQSFPNARLSRDDY---TTTPLYDQGKYDNFYSNNGDRNDNNNNDNGNNVVRQGMSDT 240

Query: 241 RFMENGKYFYDLNREPQHQSRPSRNNFRNNNYNNYNTYEYGNSMGRY--QNDETEFQEES 286
           RFMENGKY+YDLNREP H SR SR  F NNN NN N+Y+YGNSMGRY  QNDE EFQEE 
Sbjct: 241 RFMENGKYYYDLNREPHHYSRSSRGYFGNNNNNNGNSYQYGNSMGRYQNQNDEAEFQEEP 300

BLAST of CmaCh07G002210 vs. NCBI nr
Match: XP_023003783.1 (protein E6-like [Cucurbita maxima])

HSP 1 Score: 554.3 bits (1427), Expect = 6.2e-154
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180

Query: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 285

BLAST of CmaCh07G002210 vs. NCBI nr
Match: XP_022926835.1 (protein E6 [Cucurbita moschata])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 271/286 (94.76%), Postives = 277/286 (96.85%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLTNSEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEY-T 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY T
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAT 180

Query: 181 TTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQ 240
           TTTTTPSYDEEKYN DDNNNNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDL+REPQ
Sbjct: 181 TTTTTPSYDEEKYN-DDNNNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLHREPQ 240

Query: 241 HQSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           HQSR SRNNFRNN  NNYNTYEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 HQSRSSRNNFRNN--NNYNTYEYGNSMGRYQNDETEFQEESDEFVP 283

BLAST of CmaCh07G002210 vs. NCBI nr
Match: KAG6594586.1 (Protein E6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.4 bits (1313), Expect = 1.0e-140
Identity = 267/285 (93.68%), Postives = 274/285 (96.14%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLTNSEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY  
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180

Query: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYN+DD +NNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNDDD-DNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           QSR SRNNFRNN  NNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRSSRNNFRNN--NNYNRYEYGNSMGRYQNDETEFQEESDEFVP 282

BLAST of CmaCh07G002210 vs. NCBI nr
Match: KAG7026556.1 (Protein E6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508.1 bits (1307), Expect = 5.1e-140
Identity = 266/285 (93.33%), Postives = 273/285 (95.79%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLT SEKTT+PQDQD
Sbjct: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTTSEKTTTPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFSPSD+KFSDPNARTGGRPF+TTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESGQFSPSDAKFSDPNARTGGRPFSTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY  
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEYAA 180

Query: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYN+DD +NNNFY NNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNDDD-DNNNFYANNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           QSR SRNNFRNN  NNYN YEYGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRSSRNNFRNN--NNYNRYEYGNSMGRYQNDETEFQEESDEFVP 282

BLAST of CmaCh07G002210 vs. NCBI nr
Match: XP_023517993.1 (protein E6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138
Identity = 265/285 (92.98%), Postives = 273/285 (95.79%), Query Frame = 0

Query: 1   MASSTKLLSLFLLSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 60
           MASSTKLLSL LLSLFFIQIHGRESNFFSKVPNNNGE+QIPN VDPLTNSEKTT+PQDQD
Sbjct: 1   MASSTKLLSLLLLSLFFIQIHGRESNFFSKVPNNNGESQIPNKVDPLTNSEKTTNPQDQD 60

Query: 61  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120
           PNFIPQTQDNGYGLYGHES QFS SD+KFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV
Sbjct: 61  PNFIPQTQDNGYGLYGHESAQFSTSDAKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 120

Query: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEYTT 180
           SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNT LSR+EY  
Sbjct: 121 SYKSESEEYYNYNNNYNNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTRLSRNEY-A 180

Query: 181 TTTTPSYDEEKYNEDDNNNNNFYVNNRNDNENNVARQGMSDTRFMENGKYFYDLNREPQH 240
           TTTTPSYDEEKYN+D  NNNNFYVNNR+DNENN+ARQGMSDTRFMENGKYFYDLNREPQH
Sbjct: 181 TTTTPSYDEEKYNDD--NNNNFYVNNRDDNENNMARQGMSDTRFMENGKYFYDLNREPQH 240

Query: 241 QSRPSRNNFRNNNYNNYNTYEYGNSMGRYQNDETEFQEESDEFVP 286
           QSRPSRNNFRNN  NNYNT +YGNSMGRYQNDETEFQEESDEFVP
Sbjct: 241 QSRPSRNNFRNN--NNYNTNQYGNSMGRYQNDETEFQEESDEFVP 280

BLAST of CmaCh07G002210 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-16
Identity = 108/319 (33.86%), Postives = 159/319 (49.84%), Query Frame = 0

Query: 1   MASSTKLLSLFL---LSLFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTT--- 60
           MA ST+   LF    L L   QIH R+S FF K    + + Q PN+  PL  SEKTT   
Sbjct: 1   MAFSTRGSLLFFFTTLVLLSTQIHARDSYFFGKFHRESPKDQNPNSFIPLETSEKTTVEE 60

Query: 61  -----SPQDQDPNFIPQTQDNGYGLYGHESTQFSPSDSK--FSDPN---ARTGGRPFTTT 120
                  Q+QDP F+P++  NGYGLYGHE+T  + +D+K  F++ N    +   + F+T 
Sbjct: 61  SVLNKKEQEQDPTFVPES-GNGYGLYGHETTYNNNNDNKEEFNNNNKNDEKVNSKTFSTP 120

Query: 121 TTYDDGE--NNYKRNDDVSYKSESEEY----YNYNNNYNNDNFQNSNWKKPYENSFY--- 180
           +  +  E  NNY+ N    Y  ++E Y    YN     NN+N  ++N+K+ + N+ Y   
Sbjct: 121 SLSETEESFNNYEEN----YPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYDEN 180

Query: 181 YNKDLYDNRRQSFQNTLLSRDEYTTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDN----- 240
           Y K+ ++N   +  N     DE     + P  +E+  N+ +  N+N Y            
Sbjct: 181 YAKEEFNNNNNN-NNYNYKYDENVKEESFPENNED--NKKNVYNSNAYGTELERETPYKG 240

Query: 241 -ENNVARQGMSDTRFMENGKYFYDL--NREPQHQSRPSRNNFRNNNYN------NY--NT 279
             +N+ RQGMSDTRFME G Y+YDL  +R   H  R S +      Y+      NY   +
Sbjct: 241 YSHNLERQGMSDTRFMEKGSYYYDLYNDRNHGHYYRKSHSKSPAGYYSSPATETNYEQQS 300

BLAST of CmaCh07G002210 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-14
Identity = 94/301 (31.23%), Postives = 129/301 (42.86%), Query Frame = 0

Query: 3   SSTKLLSLFLLS--LFFIQIHGRESNFFSKVPNNNGETQIPNTVDPLTNSEKTTSPQDQD 62
           S++  L  FLL+  LF  QI  R S  F K    + + Q PN + P+  +EK   P DQ+
Sbjct: 4   STSSCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNPNNLVPIETNEK-KEPDDQN 63

Query: 63  PNFIPQTQDNGYGLYGHESTQFSPSDSKFSDPNARTGGRPFTTTTTYDDGENNYKRNDDV 122
           P FIPQ+ +NGYGLYGHE+T          + N       +     YDD  +    ++  
Sbjct: 64  PAFIPQS-ENGYGLYGHETT---------DNNNEELNNNKYEDNVNYDDSFSTPSLSETA 123

Query: 123 SYKSESEEYYNYNNNY--NNDNFQNSNWKKPYENSFYYNKDLYDNRRQSFQNTLLSRDEY 182
                 E Y NY  +Y    + + N+     YENS  Y  D  DN          ++D  
Sbjct: 124 ---QTQESYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPYKGYSNKD-- 183

Query: 183 TTTTTTPSYDEEKYNEDDNNNNNFYVNNRNDNE-------NNVARQGMSDTRFMENGKYF 242
                  SY E         N N Y   + + E       NNV RQGMSDTR+M NGKY+
Sbjct: 184 ------TSYYE---------NPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGKYY 243

Query: 243 YDLNREPQHQSRPSRNNFRNNNYNNYNTYEYGNSMGRYQN-------DETEFQEESDEFV 286
           YDL+ +  H        F  N+Y NY    Y      ++N        E   +E+ D+  
Sbjct: 244 YDLDDDRNH------GRFYQNHYYNYKPTGYNEKKSNFKNPYDSNQQSEMLGEEQGDQIT 267

BLAST of CmaCh07G002210 vs. TAIR 10
Match: AT1G03820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 8.7e-05
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 0

Query: 166 QSFQNTLLSRDEYTTTTTTPSYDEEKYNED------------DNNNNNFY---VNNRNDN 225
           + F+  + + DE   T    +++EE+ +ED            +NNNNN Y    NN NDN
Sbjct: 91  EEFEKLMATFDEEKNTKLPEAFEEEEESEDSEDLNEPKDKYNNNNNNNGYTYTTNNYNDN 150

Query: 226 ----ENNVARQGMSDTRFMENGKYFYDLNREPQHQSRPSR--NNFRNNNYNN 257
                N   +QGMSDTR MENGKYFYD  R    ++ PSR   N R N++ N
Sbjct: 151 GRGYGNEEEKQGMSDTRVMENGKYFYD-TRGRNSENTPSRGYENARGNDHTN 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q011975.3e-2335.45Protein E6 OS=Gossypium hirsutum OX=3635 GN=E6 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1KXL83.0e-154100.00protein E6-like OS=Cucurbita maxima OX=3661 GN=LOC111497261 PE=4 SV=1[more]
A0A6J1EM797.6e-14294.76protein E6 OS=Cucurbita moschata OX=3662 GN=LOC111433831 PE=4 SV=1[more]
A0A5D3CMI34.0e-8267.96Protein E6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007690 PE... [more]
A0A1S3B2M65.2e-8267.74protein E6 OS=Cucumis melo OX=3656 GN=LOC103485307 PE=4 SV=1[more]
A0A0A0KLJ04.4e-8165.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023003783.16.2e-154100.00protein E6-like [Cucurbita maxima][more]
XP_022926835.11.6e-14194.76protein E6 [Cucurbita moschata][more]
KAG6594586.11.0e-14093.68Protein E6, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7026556.15.1e-14093.33Protein E6, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023517993.13.6e-13892.98protein E6-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G28400.18.3e-1633.86unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G33850.16.0e-1431.23unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G03820.18.7e-0539.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..118
NoneNo IPR availablePANTHERPTHR35274:SF2E6-LIKE PROTEINcoord: 1..285
IPR040290Protein E6-likePANTHERPTHR35274E6-LIKE PROTEINcoord: 1..285

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G002210.1CmaCh07G002210.1mRNA