![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmaCh07G001840 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATGATACCTGCTGCTTTAAAAACAAGCCCAACTCACAGATCATCAAAACTCTCTCTTTCTCAATATAAGCATCAGTTTGATCCAATCAATGAACTGGAGTGGAGCTTTGTTGATTATTTGAAGTGGGAATCAGCCTTTTAGATCGAGGACTTCGAGTTTGTTGATATTCATTCTTCAATTACCTTCAAGAGGAAGATAAACTTGAGCTATCCAAGCTCAACCTCATCATCTTCTATTCATGGTTTGTATATATATTTCATCTTTCTTTTAATTCATGATATTCATAGCTTTATTTGTAAATAGATTCTAAAAAATGATATCAAGTTTATTACCTTATGCTTTTAGGTTTAATGGAAGAAACCTAATTTCTATACGTGAACAGTTCTTGATATGTTTATGTAGATGATCTGAATCATGATCCTTTTCTCCTTAAAATCTTACCCTTTTAGACCCTTTTCTTGTCAGTATTGCAGCAACCTATTATTGAATTTTCGAGATCGACAGAAGTGGGACGGGACCGATGAAAGGCGAGCGAGCCGAGCCGAAGAGAAGTTCGATCCCTTGTCATCAAGAAAATGCTCATTGATTGATTTGAATGAAGAGGCAAGGGTTGAAGATGGTGATCATGACACTAATGTAGTAGTTGAGCAAAATGAAGAGAGAAAAAAATATGGAAGCACTTCAATTCAGAATGCTAATAACTCATCAAGAGAAGAAAATGCAAGGAGGACGACAGTGAGACAGTATGTTAGATCAAAAGTGCCTCGTCTACGTTGGACTCCTGAGCTTCATCTCAATTTTGTGAATGCTGTTGAAAGGCTTGGTGGCCAAGAGAGTAATAATCTGTCTCTTCTTTCAACAATTTCAAAAGGGTTTGTGTAAATTTAGTCTCTTAATCCAAAATAGTTATAAAGTTCAAATCTTTGTGTTAATTGTAGGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTGAAAGGACTAAGCATTGCCCATGTTAAGAGCCATTTACAGGTACTGTAAAAATCAAAGCTTTTTATGAGTTTTCACTTTCCCTAACCCTAATTAGCCACACACACATTGCCTTTTCAGATGTATCGAAGTAAGAAGCTTGACCAAACTGGGCAAGGTACAGATTAGGGTTTTATTAAACAAGCTCATATCTTTATGGATTTAGGGTTTTTCAAAAGTTTTGTTTTTGTGTGTAATAGTTATAGGAGAAGCATGCAATGGGGTGATGCATGGAGGATACTTCAATAGCAGTAATAATGGCATCATGAGCTTATTGCTCCAACAACCAACCCGCCATTCTTGCTGCCATCCAGTACTCACAAGGCATCTCCATTCCCACTTTGGAACTGCTAGAACAACACTTTTTGCACCCTATCATGGCAGGCCTTACAGGTATCAAAACTTTTGAACTTTTTTAATGTACTTTCTCTTGCTTGTTTATCCGTTTGATATTTGGATGTAGCCAAGTTTTGGAGCAAAAGAGTAGATGGAGTAGCTTAGGAGAAAGGGCGTGGAAGATGAGAAGAATGAATGATCCAACGGCAAGTCATGGAAAGATAAGAGAGTTGAGAGGGAATTATTGGGAAGAAGGGAGTGTTGAGGCGATGAAGAAGAGGAGAGAGGAATGGGAGCCAGAGTTGCAGCTGGGATTGAGCTACACAAAGAGTAATAGTAATAAAGAAATCACCACTGAACTTTCCCTTTCTTGAATGCTACCTGTGTGATGTCATATATACATATTATACACAAAGCCAAAAGGATAGAGAAGTGAAGTGAAGTTGTTGGTTGAGTTGCAGAGAAGATGATGATGATAATAATAATCTGGTCTCCTATTGCAAAATCAGCTGGCCATGATAATTGTACCCAATAATAGTTAGAGGGACAGAGAAAAAAAAGGGAAGAACTTTTGCAGCCGTTTGGGTTTGAATTCATTTTGAGTTTTGGCATTCATTGCATGTATGGCAGACAAACAACACTCATAATGTAACTCATTGCATATTCTTCACTTTAATAATTCTGCAGACC CATGATACCTGCTGCTTTAAAAACAAGCCCAACTCACAGATCATCAAAACTCTCTCTTTCTCAATATAAGCATCAGTTTGATCCAATCAATGAACTGGAGTGGAGCTTTGTTGATTATTTGAAGTGGGAATCAGCCTTTTAGATCGAGGACTTCGAGTTTGTTGATATTCATTCTTCAATTACCTTCAAGAGGAAGATAAACTTGAGCTATCCAAGCTCAACCTCATCATCTTCTATTCATGTATTGCAGCAACCTATTATTGAATTTTCGAGATCGACAGAAGTGGGACGGGACCGATGAAAGGCGAGCGAGCCGAGCCGAAGAGAAGTTCGATCCCTTGTCATCAAGAAAATGCTCATTGATTGATTTGAATGAAGAGGCAAGGGTTGAAGATGGTGATCATGACACTAATGTAGTAGTTGAGCAAAATGAAGAGAGAAAAAAATATGGAAGCACTTCAATTCAGAATGCTAATAACTCATCAAGAGAAGAAAATGCAAGGAGGACGACAGTGAGACAGTATGTTAGATCAAAAGTGCCTCGTCTACGTTGGACTCCTGAGCTTCATCTCAATTTTGTGAATGCTGTTGAAAGGCTTGGTGGCCAAGAGAGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTGAAAGGACTAAGCATTGCCCATGTTAAGAGCCATTTACAGATGTATCGAAGTAAGAAGCTTGACCAAACTGGGCAAGTTATAGGAGAAGCATGCAATGGGGTGATGCATGGAGGATACTTCAATAGCAGTAATAATGGCATCATGAGCTTATTGCTCCAACAACCAACCCGCCATTCTTGCTGCCATCCAGTACTCACAAGGCATCTCCATTCCCACTTTGGAACTGCTAGAACAACACTTTTTGCACCCTATCATGGCAGGCCTTACAGCCAAGTTTTGGAGCAAAAGAGTAGATGGAGTAGCTTAGGAGAAAGGGCGTGGAAGATGAGAAGAATGAATGATCCAACGGCAAGTCATGGAAAGATAAGAGAGTTGAGAGGGAATTATTGGGAAGAAGGGAGTGTTGAGGCGATGAAGAAGAGGAGAGAGGAATGGGAGCCAGAGTTGCAGCTGGGATTGAGCTACACAAAGAGTAATAGTAATAAAGAAATCACCACTGAACTTTCCCTTTCTTGAATGCTACCTGTGTGATGTCATATATACATATTATACACAAAGCCAAAAGGATAGAGAAGTGAAGTGAAGTTGTTGGTTGAGTTGCAGAGAAGATGATGATGATAATAATAATCTGGTCTCCTATTGCAAAATCAGCTGGCCATGATAATTGTACCCAATAATAGTTAGAGGGACAGAGAAAAAAAAGGGAAGAACTTTTGCAGCCGTTTGGGTTTGAATTCATTTTGAGTTTTGGCATTCATTGCATGTATGGCAGACAAACAACACTCATAATGTAACTCATTGCATATTCTTCACTTTAATAATTCTGCAGACC ATGTATTGCAGCAACCTATTATTGAATTTTCGAGATCGACAGAAGTGGGACGGGACCGATGAAAGGCGAGCGAGCCGAGCCGAAGAGAAGTTCGATCCCTTGTCATCAAGAAAATGCTCATTGATTGATTTGAATGAAGAGGCAAGGGTTGAAGATGGTGATCATGACACTAATGTAGTAGTTGAGCAAAATGAAGAGAGAAAAAAATATGGAAGCACTTCAATTCAGAATGCTAATAACTCATCAAGAGAAGAAAATGCAAGGAGGACGACAGTGAGACAGTATGTTAGATCAAAAGTGCCTCGTCTACGTTGGACTCCTGAGCTTCATCTCAATTTTGTGAATGCTGTTGAAAGGCTTGGTGGCCAAGAGAGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTGAAAGGACTAAGCATTGCCCATGTTAAGAGCCATTTACAGATGTATCGAAGTAAGAAGCTTGACCAAACTGGGCAAGTTATAGGAGAAGCATGCAATGGGGTGATGCATGGAGGATACTTCAATAGCAGTAATAATGGCATCATGAGCTTATTGCTCCAACAACCAACCCGCCATTCTTGCTGCCATCCAGTACTCACAAGGCATCTCCATTCCCACTTTGGAACTGCTAGAACAACACTTTTTGCACCCTATCATGGCAGGCCTTACAGCCAAGTTTTGGAGCAAAAGAGTAGATGGAGTAGCTTAGGAGAAAGGGCGTGGAAGATGAGAAGAATGAATGATCCAACGGCAAGTCATGGAAAGATAAGAGAGTTGAGAGGGAATTATTGGGAAGAAGGGAGTGTTGAGGCGATGAAGAAGAGGAGAGAGGAATGGGAGCCAGAGTTGCAGCTGGGATTGAGCTACACAAAGAGTAATAGTAATAAAGAAATCACCACTGAACTTTCCCTTTCTTGA MYCSNLLLNFRDRQKWDGTDERRASRAEEKFDPLSSRKCSLIDLNEEARVEDGDHDTNVVVEQNEERKKYGSTSIQNANNSSREENARRTTVRQYVRSKVPRLRWTPELHLNFVNAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKLDQTGQVIGEACNGVMHGGYFNSSNNGIMSLLLQQPTRHSCCHPVLTRHLHSHFGTARTTLFAPYHGRPYSQVLEQKSRWSSLGERAWKMRRMNDPTASHGKIRELRGNYWEEGSVEAMKKRREEWEPELQLGLSYTKSNSNKEITTELSLS Homology
BLAST of CmaCh07G001840 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.4e-23 Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.9e-20 Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-16 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy TrEMBL
Match: A0A6J1KSX3 (myb family transcription factor EFM-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496947 PE=4 SV=1) HSP 1 Score: 618.2 bits (1593), Expect = 1.8e-173 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy TrEMBL
Match: A0A6J1KRD7 (myb family transcription factor EFM-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496947 PE=4 SV=1) HSP 1 Score: 575.1 bits (1481), Expect = 1.8e-160 Identity = 292/308 (94.81%), Postives = 292/308 (94.81%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy TrEMBL
Match: A0A6J1ELQ3 (protein PHOSPHATE STARVATION RESPONSE 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433717 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152 Identity = 284/312 (91.03%), Postives = 288/312 (92.31%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy TrEMBL
Match: A0A6J1EFH2 (protein PHOSPHATE STARVATION RESPONSE 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433717 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 2.0e-119 Identity = 223/231 (96.54%), Postives = 225/231 (97.40%), Query Frame = 0
BLAST of CmaCh07G001840 vs. ExPASy TrEMBL
Match: A0A0A0KHW1 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519620 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 4.3e-82 Identity = 207/346 (59.83%), Postives = 241/346 (69.65%), Query Frame = 0
BLAST of CmaCh07G001840 vs. NCBI nr
Match: XP_023003294.1 (myb family transcription factor EFM-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 618.2 bits (1593), Expect = 3.8e-173 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CmaCh07G001840 vs. NCBI nr
Match: XP_023003295.1 (myb family transcription factor EFM-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 575.1 bits (1481), Expect = 3.6e-160 Identity = 292/308 (94.81%), Postives = 292/308 (94.81%), Query Frame = 0
BLAST of CmaCh07G001840 vs. NCBI nr
Match: XP_022926645.1 (protein PHOSPHATE STARVATION RESPONSE 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 547.7 bits (1410), Expect = 6.2e-152 Identity = 284/312 (91.03%), Postives = 288/312 (92.31%), Query Frame = 0
BLAST of CmaCh07G001840 vs. NCBI nr
Match: XP_023518844.1 (protein PHOSPHATE STARVATION RESPONSE 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 547.4 bits (1409), Expect = 8.1e-152 Identity = 284/312 (91.03%), Postives = 288/312 (92.31%), Query Frame = 0
BLAST of CmaCh07G001840 vs. NCBI nr
Match: KAG6594543.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151 Identity = 283/312 (90.71%), Postives = 288/312 (92.31%), Query Frame = 0
BLAST of CmaCh07G001840 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of CmaCh07G001840 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 122.5 bits (306), Expect = 6.0e-28 Identity = 79/176 (44.89%), Postives = 103/176 (58.52%), Query Frame = 0
BLAST of CmaCh07G001840 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 119.0 bits (297), Expect = 6.7e-27 Identity = 69/129 (53.49%), Postives = 86/129 (66.67%), Query Frame = 0
BLAST of CmaCh07G001840 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 9.9e-23 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmaCh07G001840 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 4.6e-20 Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|