CmaCh06G017300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G017300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CCT-theta
Location	Cma_Chr06: 10584503 .. 10590875 (+)
RNA-Seq Expression	CmaCh06G017300
Synteny	CmaCh06G017300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATTTCATTTGGTCCTAAAACCCTTCACTCCCTTCCGCCATACTCCAACTTACTGAACTTCTAGGGCTTTCTTGCTTCTCCTTCTCCCTCCATTGCATTCATTTACTCGCTCGCACTCCTGGGGTTTGACGTCTGCTCATCTCCTGTGCCATTTCCTGCCCCACCTCTAGTTTCTCACTCTCTAAGTTCAGGCTTTTCACAGGAATTCGAAGATGGGTTTCCAGCTGCCGTCTCATGGAATTCAATCCATGCTTAAAGAGGGTCACAAGCATCTCTCCGGCTTGGATGAGGCTGTTCTCAAGAACATTGACGCCTGCAAACAGCTCTCCACTATTACTCGAACATCTCTTGGTCCCAATGGTATGTTTCCTCTGATCTCAACCCCACTGCTCCTTTTTTCCCCATTTCGTTTCATATTATGTTATTTAGAGTTTTTTAGAACGAAAATGTGACGCACATTTGCGTCACCGGTTTTTTAGTATGATTTTTTTGTCGGTTTATCTTTGTACGCCAACTATGGGAGGGTATCGTTTCCCCTTCCAAGAGGCGAACTTTCTTTGAAGACAGACAGAGATACATTACATTGCAGATCGGACAATGAATCCAATCTGAACTGTAGGATTAACCTTGCAGTTATAAAGACAAAGGTTGGATAGGCGAGACAAATAATGGTTAAGTTTATTTGCAATTGTACGTCTGCTGTAATGAAAACATTTCAACTTCATTCTGAATTGAGCTATTTGTAAGTACCTGCATAGCTCAACTGAGATTCAAATCCCCCCGACCACCCACATATTTCAGTGCAATCAAAATTTTAGAAAGCCATCATGTATAAGAAAGCTCTATTGGTAATTTTTACTTAACATTTAAGGTTGGAGCTTAATGTAGAAATTTGCGAGAATAATTAAGACAATATTGTTCAAGGAGTGCTTCTATAGCCTCTGCTTTTAAATGTTTTCTTTCTAGAGTTTTTGTACTGTTTGAAATATATTCCAAACGTACTATCTATGTCAATGCCCTTATTCTTAAGTATCTTTTCTCAGGAATGAATAAGATGGTAATTAATCATCTAGACAAGCTTTTTATCACAAATGACGCTGCAACAATTGTTAATGAACTAGAGGTACAGCATCCTGCAGCCAAAATTTTGGTTTTAGCAGGTAAAGCTCAGCAAGAAGAAATTGGTGATGGAGCTAATCTAACAATTTCATTTGCCGGGGAGCTTTTACAAAACGCTGAAGAGCTCATCAGGATGGGTCTGCACCCTAGCGAAATAATCAGTGGCTACACGAAAGGAATCAATAAGGTTTCTCACTTTTACAATGGTTATGGAAAACATAGATGAAATTTTGTAACATGCCATTTTAATATCATGTCTTCACTTTGGTTCAGACTATTGAGGTTTTGAATGAACTAGTGGAGAAGGGTTCAGAGAACATGGATGTTCAAAACAAAGAGCAAGTTATTTCGCGAATGAAAGCTGCTGTTGCTAGCAAGCAATTTGGACAAGAAGATTTTATTTGTTCTCTAGTTGCTGATGTATATTTTCCTACTCTTGTTACAATTGAGTAATTATCCTGTAAATCCTTTCCTTGCCAATTTATGAATACATTTTTTCTGTGTTGCAGGCATGCATTCAAGTATGTCCTAAGAATCCGCAAAATTTCAATGTGGACAATGTTCGAGTTGCAAAGTTATTAGGAGGTGGGTTGCATAATTCTTCAGTAGTGCGCGGCATGGTCTTGAAAAGTGATGCTGTGGGAAGTATAAAGCGAATTGAGAAGGCCAAGGTATGAACAACCATTTATTTACACTTCCATCATGATGAATGTGTTTCTTATGTACTTGCCTATTGTTGATTCATGTTCTTCTGCGAGGTTATACATGTTTTTCTTTTTAATTTAATTTATTTGTTCTTCATATGCTTACAACTGGTTTAATTATGTAATTATTACTGCTCGATGATGTGTTGTTCCCAGCTAATGTGCTAACCAAGATTAGATGGCAGTGATTCTCTTAGGATAAGTTTTGTTTCATGCAAAAAGAAGAAAAATGTTAGAGGATGTTAATAAAATCCTTGTTAATGGCATCCAGATCATTTCATCTTTAAGAAATGAAATTAGCATTTCTTAAATTCCAAGTGCTAATTCCTTCTGCTTGCAGAAATGAAATTTAAGAAGAAAGAGGAAAAAAGAATTAAGACTTTTATCTGCATCTGGGATAGCTGTGTTGTTATCTTTCGCTTCTACATTATGTGGTTTTAAATGTCAGCTGTATGCTTACATAAATTATATGATTAATGATAGGCTTGGCTATTTAAGTGGGTTTTTTGGGGGATGCTGTCTTGGTGATTGTGATAGATGATGAGGAATCTTCACCTGTTTTTAACGCTTTGGTTTTTGCAAAGTAAAATTGCTTGAATATTGGTTGCATTAAACTTTGATTTGTATTATAATTTTTTATAACTAAAAAGAATTTCAAACTCTTATTTTGTTGTACTTCTCAAATATTATTGTGAAATTATTTCTCCTAGTTATTTTGGCTTGATTTGCTTCAACATTTTTTTTATGAAGGTTGCTGTATTTGTTGGTGGCGTTGATACATCTGCAACAGAAACAAAAGGAACAGTACTGATTCACACTGCTGAGGAGGTAGATCTCAAAAATTTTTATACTATTTTTTAGTTTCAATTTTCCCATTTTCAAATGGTAATCTTGTACCAAGATATTCTTTTTGGGAAGTACTTGAAGATTTGGATTGCTTCCTTTGCCTTTGGCGTCTTTTGATATTTCTTTGACCCATAAGAGATGTTGTTTTATGATGACGGAGGAGATTTTGTTTCACCTTCCATTTCGGGAGAAGGGTTGAATTCTTCGGTATTTAGATTTTCTTTTTTTGGCTGTTTGAGAATTTTGCTTGAGAGGGACAGGAGAACTTCTAGGGGTGTTGATAGGTCTGGAAGGAGGTTCAGTCTATTGATATGTTTAATGCTTCTATTTAGGCATTCTCTTCTAGAAGTTTTATAATTCTTCTTCAGGTCTTATTCTTTTGAATTAGAACTCTTTTTGTATCTTTAGCTCATTTTTTGGCTGGCTTCATTGGTTGGGCTGCTTGTTTTGTAGGCACTTCTTATATATGTCATATCTCTCAGCTTGAATTTCCAATAAATAATGTATTAATCTAACTAGATGTCTCTTCGTTTATTTGAGGCAATTTTGGTTGGTAGTGGAGTAATCATGGAAAATAGAAAAGGAGTCCTGCTTCTTAGTGATATTTTTTTTTTTTGTTATTATTTTGATTGGAAATTATAAATCTTATTTTTGGATATTCTCTTGTTTTATTGCTTATAATTATCTTCTTGTTTTGCCTGGTTCAGATATTGTCCTACTTTTTCTTGATGAAAAAAATGGCATTCTTTCACTTTTGGGCTCTTTGTGAGGTTTTTGGTTGCAATTGCATTTGTATTTTTTTTTAATATCAATTTATCCACATGCTTATCAACTGTAGCTACAAAACTATGCAAAAACGGAGGAAGCTAAAGTTGAGGAGCTGATAAAAGCAGTTGCAGATTCAGGGGCTAAAGTAATTGTTAGTGGAGCAGCTGTTGGGGAAATGGCTCTACATTTCTGTGAGCGCTACAAGTATGTTGAGTTTTCCTTCTCTCTGTTGTTTTTTGGTCTCCAGTTAAGTTCTAAAAATGTGGTTGCTGAATAAAAATGCTATATTTCTTGTTCATTGCACTCATAGAAATGTACGTTTGATGTGCACTAGATTCTGTTGGGTGATGGAGGAAAAAGCGTTGTTCCATCTCTTTGTTTTACTGACTCCATATCAGGTTCAAGCATGTTTATAACTTTGTAATATATCCAAATCTATGTCTATGATACGGCTGTATGATTTTAGAATTTAAAATTAGTAGATAGGAATTTTTATGGTACTAATTTGCTTTGGTGATGCATGTTGGGAAGAGTTGGTTTGTGATGTGTTGGATATGGATGAACTATCAAGATTCAATCTTTCTTTCCCCTTCGATTCTTTCTTTAGTTTCATTTACTGTTGCACTGCAGGCTTATGGTGTTAAAAATTAGCTCAAAGTTTGAGTTGCGGAGATTTTGTCGCACAACTGGTGCTGTAGCCATGGTAAGCTTGTTCTGGCTTTTGCTATTGATAAAGTGAGATTGTTTTCTTCATTGCTATTGACATAGTTCCCCCACCCCCACCAAACGACAGTTGAAGCTTAGCCAGCCAAATCCAGATGACTTGGGTCACGTGGACTCTGTCTCAGTTGAAGAAATTGGTGGTGCTAGGGTATGTTGTCTGTATGAACTTAATTATTTTTATATTGTACAGTTTTTCATGATTGCCTCTTGATTTGTGGCACAATTACTAATTATTTTCCTTTGATATTGTATAATAGGTCACAGTTGTGAAGAATGAAGAGGGGGGTAACTCCATATCAACAGTTGTGTTACGAGGAAGTACCGATAGTATTCTGGATGATCTTGAACGGGCAATTGATGATGGAGTTAATACCTACAAAGTATTTCTCTGCATATGTACTGTTTGTTTTTTGGAATTATTTGGAGCTTGCGTAATGATTTTCTTTGTCAGGCAATGGCGAGGGACAGCCGAATAGTACCTGGTGCTGCTGCTACTGAAATTGAGTTGGCTAGAAGAGTGAAGGAGTTCTCTTTTAAAGAAACTGGGTATTTCTTTTTATTTTTTTTTTAAATTTAATATTGCACAAGTGAAGATCACTTTTTTTTACTATCGAACAGAATCGCTTCTTAACAGCATCATTTCTCTGGCAAGAAAAGGAAATTTTTTTACACAACTGACATAATCAGAGTGAATGCAAACTTGAGTCATGTAATGTCACGGGAAGTCATGTAATGCCAGCTCTAGATGTCCCATTTAACACGTTAATGTTTTCTAACTTTTCTTTTTGATTCAGATCAATGCATGTTTGTTCGTTGATTTGGTCAATGTGTTGAATTATTTCCTAGGGATGCTGAAATGAGGACTAGAGTCATTCTATTCTATTATTGAAGAAACACTGACGACTTTTCCTTTTGTCTGTAGATTGGATCAGTATGCCATTGCGAAATTTGCAGAAAGTTTTGAGATGGTACCAAAAACTCTTTCTGAAAATGCTGGGCTAAATGCAATGGAGATAATTTCCTCATTGTATGCTGAGCATGCATCCGGAACTACCAGAGTGGGTATAGACATGGAGGAAGGGACTTGCAAGGATGTTTCCACGATGAATATCTGGGATCTTCACATTACTAAGTCAGTTTTCATTCTCTTACAATGTGAAAAATTATGATTATTCTCAAGAAACTCTTAGTTCGGTGCTTCATACAATATATAATTGTGTATCTTTCTTGTAAAGTTGCATTTTTCTTAATTCTTACTTGTATATAATTATGTTACAAGATATAGTTAGTGCCTTGCTTATTTCGTAAGGTAGTCATCATTATACGATAAATCTGTCCTGTTAAATGCATGTTACTGGTGATGACTTCATTCTTGTTTTTTTTTTTTAAAAAAAGTCATTAGGGATGCTGCTAACTCATGATGACATGCGCTTTTGTCTGGCTTTTTTTCTTTTCTAGGTTATTTGCTCTTAAGTATGCCGCTGATGCTGCTTGTACTGTCCTTCGAGTCGACCAGGTACCCTTGTATTAATCTGCTGATGCTTGCTTGCATTGACATTTAATTTGTTAAGATCATATATATTTACATAGGACTGCTGAGACTCACAAGATCAACCTTCTAATATTTATTGACCTTGTTAAGTTTTAATCCTGGAAGGTTGCTTGCATAATACATGAATTTGAAGCAGGAGATAATGCGTAATGTATTTTTAAATATGTTTTGGACTGAACGTTATTATTCCACCCATGTTGCAGATTATAATGTCAAAACCAGCAGGAGGTCCCAGGAGAGGACAGCAGCCTGCAGGGATGGACGAGGACTAAATGCTGAATTGGGCTACATTATTATTTATCTTTAAGTTTTGATTAAGATACTAAAATGGTTTGTTTTATATATATATAAAAGAAGAGAGGGGTGGTGTTTCCATTGCATTTGGGGCTTGGTTGGGGAAATGTGGCTTTTTACGCGTGCCACTACTACTAGCAGGACTATTTCTTTTTAGTCACCGGTTTTGTCTGTTGGATAGATTGTACTGTTGATGATGTTGTTATAGTGAGGCCTCTTTTGTTTATGATACAATCAGAACGTGGTTATGCCAAGGGTAGCTTATTAGGTAGGTTTCTCAATTCCCATGTTTATTTGGATCGATTATTCAGGTGTGTTTCTATTCATTAATATTTGTCAAGAAATTTATGGAATTTTACTCTCAAC

mRNA sequence

GCATTTCATTTGGTCCTAAAACCCTTCACTCCCTTCCGCCATACTCCAACTTACTGAACTTCTAGGGCTTTCTTGCTTCTCCTTCTCCCTCCATTGCATTCATTTACTCGCTCGCACTCCTGGGGTTTGACGTCTGCTCATCTCCTGTGCCATTTCCTGCCCCACCTCTAGTTTCTCACTCTCTAAGTTCAGGCTTTTCACAGGAATTCGAAGATGGGTTTCCAGCTGCCGTCTCATGGAATTCAATCCATGCTTAAAGAGGGTCACAAGCATCTCTCCGGCTTGGATGAGGCTGTTCTCAAGAACATTGACGCCTGCAAACAGCTCTCCACTATTACTCGAACATCTCTTGGTCCCAATGGAATGAATAAGATGGTAATTAATCATCTAGACAAGCTTTTTATCACAAATGACGCTGCAACAATTGTTAATGAACTAGAGGTACAGCATCCTGCAGCCAAAATTTTGGTTTTAGCAGGTAAAGCTCAGCAAGAAGAAATTGGTGATGGAGCTAATCTAACAATTTCATTTGCCGGGGAGCTTTTACAAAACGCTGAAGAGCTCATCAGGATGGGTCTGCACCCTAGCGAAATAATCAGTGGCTACACGAAAGGAATCAATAAGACTATTGAGGTTTTGAATGAACTAGTGGAGAAGGGTTCAGAGAACATGGATGTTCAAAACAAAGAGCAAGTTATTTCGCGAATGAAAGCTGCTGTTGCTAGCAAGCAATTTGGACAAGAAGATTTTATTTGTTCTCTAGTTGCTGATGCATGCATTCAAGTATGTCCTAAGAATCCGCAAAATTTCAATGTGGACAATGTTCGAGTTGCAAAGTTATTAGGAGGTGGGTTGCATAATTCTTCAGTAGTGCGCGGCATGGTCTTGAAAAGTGATGCTGTGGGAAGTATAAAGCGAATTGAGAAGGCCAAGGTTGCTGTATTTGTTGGTGGCGTTGATACATCTGCAACAGAAACAAAAGGAACAGTACTGATTCACACTGCTGAGGAGCTACAAAACTATGCAAAAACGGAGGAAGCTAAAGTTGAGGAGCTGATAAAAGCAGTTGCAGATTCAGGGGCTAAAGTAATTGTTAGTGGAGCAGCTGTTGGGGAAATGGCTCTACATTTCTGTGAGCGCTACAAGCTTATGGTGTTAAAAATTAGCTCAAAGTTTGAGTTGCGGAGATTTTGTCGCACAACTGGTGCTGTAGCCATGTTGAAGCTTAGCCAGCCAAATCCAGATGACTTGGGTCACGTGGACTCTGTCTCAGTTGAAGAAATTGGTGGTGCTAGGGTCACAGTTGTGAAGAATGAAGAGGGGGGTAACTCCATATCAACAGTTGTGTTACGAGGAAGTACCGATAGTATTCTGGATGATCTTGAACGGGCAATTGATGATGGAGTTAATACCTACAAAGCAATGGCGAGGGACAGCCGAATAGTACCTGGTGCTGCTGCTACTGAAATTGAGTTGGCTAGAAGAGTGAAGGAGTTCTCTTTTAAAGAAACTGGATTGGATCAGTATGCCATTGCGAAATTTGCAGAAAGTTTTGAGATGGTACCAAAAACTCTTTCTGAAAATGCTGGGCTAAATGCAATGGAGATAATTTCCTCATTGTATGCTGAGCATGCATCCGGAACTACCAGAGTGGGTATAGACATGGAGGAAGGGACTTGCAAGGATGTTTCCACGATGAATATCTGGGATCTTCACATTACTAAGTTATTTGCTCTTAAGTATGCCGCTGATGCTGCTTGTACTGTCCTTCGAGTCGACCAGATTATAATGTCAAAACCAGCAGGAGGTCCCAGGAGAGGACAGCAGCCTGCAGGGATGGACGAGGACTAAATGCTGAATTGGGCTACATTATTATTTATCTTTAAGTTTTGATTAAGATACTAAAATGGTTTGTTTTATATATATATAAAAGAAGAGAGGGGTGGTGTTTCCATTGCATTTGGGGCTTGGTTGGGGAAATGTGGCTTTTTACGCGTGCCACTACTACTAGCAGGACTATTTCTTTTTAGTCACCGGTTTTGTCTGTTGGATAGATTGTACTGTTGATGATGTTGTTATAGTGAGGCCTCTTTTGTTTATGATACAATCAGAACGTGGTTATGCCAAGGGTAGCTTATTAGGTAGGTTTCTCAATTCCCATGTTTATTTGGATCGATTATTCAGGTGTGTTTCTATTCATTAATATTTGTCAAGAAATTTATGGAATTTTACTCTCAAC

Coding sequence (CDS)

ATGGGTTTCCAGCTGCCGTCTCATGGAATTCAATCCATGCTTAAAGAGGGTCACAAGCATCTCTCCGGCTTGGATGAGGCTGTTCTCAAGAACATTGACGCCTGCAAACAGCTCTCCACTATTACTCGAACATCTCTTGGTCCCAATGGAATGAATAAGATGGTAATTAATCATCTAGACAAGCTTTTTATCACAAATGACGCTGCAACAATTGTTAATGAACTAGAGGTACAGCATCCTGCAGCCAAAATTTTGGTTTTAGCAGGTAAAGCTCAGCAAGAAGAAATTGGTGATGGAGCTAATCTAACAATTTCATTTGCCGGGGAGCTTTTACAAAACGCTGAAGAGCTCATCAGGATGGGTCTGCACCCTAGCGAAATAATCAGTGGCTACACGAAAGGAATCAATAAGACTATTGAGGTTTTGAATGAACTAGTGGAGAAGGGTTCAGAGAACATGGATGTTCAAAACAAAGAGCAAGTTATTTCGCGAATGAAAGCTGCTGTTGCTAGCAAGCAATTTGGACAAGAAGATTTTATTTGTTCTCTAGTTGCTGATGCATGCATTCAAGTATGTCCTAAGAATCCGCAAAATTTCAATGTGGACAATGTTCGAGTTGCAAAGTTATTAGGAGGTGGGTTGCATAATTCTTCAGTAGTGCGCGGCATGGTCTTGAAAAGTGATGCTGTGGGAAGTATAAAGCGAATTGAGAAGGCCAAGGTTGCTGTATTTGTTGGTGGCGTTGATACATCTGCAACAGAAACAAAAGGAACAGTACTGATTCACACTGCTGAGGAGCTACAAAACTATGCAAAAACGGAGGAAGCTAAAGTTGAGGAGCTGATAAAAGCAGTTGCAGATTCAGGGGCTAAAGTAATTGTTAGTGGAGCAGCTGTTGGGGAAATGGCTCTACATTTCTGTGAGCGCTACAAGCTTATGGTGTTAAAAATTAGCTCAAAGTTTGAGTTGCGGAGATTTTGTCGCACAACTGGTGCTGTAGCCATGTTGAAGCTTAGCCAGCCAAATCCAGATGACTTGGGTCACGTGGACTCTGTCTCAGTTGAAGAAATTGGTGGTGCTAGGGTCACAGTTGTGAAGAATGAAGAGGGGGGTAACTCCATATCAACAGTTGTGTTACGAGGAAGTACCGATAGTATTCTGGATGATCTTGAACGGGCAATTGATGATGGAGTTAATACCTACAAAGCAATGGCGAGGGACAGCCGAATAGTACCTGGTGCTGCTGCTACTGAAATTGAGTTGGCTAGAAGAGTGAAGGAGTTCTCTTTTAAAGAAACTGGATTGGATCAGTATGCCATTGCGAAATTTGCAGAAAGTTTTGAGATGGTACCAAAAACTCTTTCTGAAAATGCTGGGCTAAATGCAATGGAGATAATTTCCTCATTGTATGCTGAGCATGCATCCGGAACTACCAGAGTGGGTATAGACATGGAGGAAGGGACTTGCAAGGATGTTTCCACGATGAATATCTGGGATCTTCACATTACTAAGTTATTTGCTCTTAAGTATGCCGCTGATGCTGCTTGTACTGTCCTTCGAGTCGACCAGATTATAATGTCAAAACCAGCAGGAGGTCCCAGGAGAGGACAGCAGCCTGCAGGGATGGACGAGGACTAA

Protein sequence

MGFQLPSHGIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFICSLVADACIQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAKVAVFVGGVDTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNEEGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEFSFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEEGTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQPAGMDED

Homology

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BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot
Match: Q94K05 (T-complex protein 1 subunit theta OS=Arabidopsis thaliana OX=3702 GN=CCT8 PE=1 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 2.2e-256
Identity = 446/548 (81.39%), Postives = 503/548 (91.79%), Query Frame = 0


Query: 1   MGFQLPSHGIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
           +G  +  +GIQSMLKEG++HLSGLDEAV+KNI+ACK+LSTITRTSLGPNGMNKMVINHLD
Sbjct: 2   VGMSMQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLD 61

Query: 61  KLFITNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRM 120
           KLF+TNDAATIVNELE+QHPAAK+LVLA KAQQEEIGDGANLTISFAGELLQNAEELIRM
Sbjct: 62  KLFVTNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRM 121

Query: 121 GLHPSEIISGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFI 180
           GLHPSEIISGYTK ++K +E+L +LVE GSE MDV+NK++VISRM+AAVASKQFGQE+ I
Sbjct: 122 GLHPSEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEII 181

Query: 181 CSLVADACIQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAK 240
           CSLV DACIQVCPKNP NFNVDNVRV+KLLGGGLHNS +VRGMVLKSDAVGSIKR+EKAK
Sbjct: 182 CSLVTDACIQVCPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLKSDAVGSIKRMEKAK 241

Query: 241 VAVFVGGVDTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVG 300
           VAVF GGVDT+ATETKGTVLIH+AE+L+NYAKTEEAKVEELIKAVA+SGAKVIVSG ++G
Sbjct: 242 VAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKVIVSGGSIG 301

Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGA 360
           EMALHFCERYK+MVLKISSKFELRRFCRT GAVA LKLS+P+P+DLG+VDS+SVEEIGG 
Sbjct: 302 EMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSISVEEIGGV 361

Query: 361 RVTVVKNEEGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIE 420
            VT+ +NEEGGNSISTVVLRGSTDSILDDLERA+DDGVNTYKAM RDSRIVPGAAATEIE
Sbjct: 362 TVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 421

Query: 421 LARRVKEFSFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRV 480
           LA+R+KE++  E GLD+YAI K+AESFE VPKTL++NAGLNAMEII++LY  H SG T++
Sbjct: 422 LAQRLKEYANAEIGLDKYAITKYAESFEFVPKTLADNAGLNAMEIIAALYTGHGSGNTKL 481

Query: 481 GIDMEEGTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQP- 540
           GID+EEG CKDVS   +WDL  TKLFALKYA+DAACTVLRVDQIIM+KPAGGPRR     
Sbjct: 482 GIDLEEGACKDVSETKVWDLFATKLFALKYASDAACTVLRVDQIIMAKPAGGPRRDAAQA 541

Query: 541 --AGMDED 546
             AG +ED
Sbjct: 542 AGAGAEED 549

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BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot
Match: Q552J0 (T-complex protein 1 subunit theta OS=Dictyostelium discoideum OX=44689 GN=cct8 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 8.2e-158
Identity = 273/526 (51.90%), Postives = 388/526 (73.76%), Query Frame = 0


Query: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDA 68
           G+  MLK+G KH +G DEA+L+NIDA KQLS ITRTSLGPNGMNKM+INHL+KLF+TNDA
Sbjct: 3   GLTDMLKDGAKHFAGKDEAILRNIDATKQLSEITRTSLGPNGMNKMIINHLEKLFVTNDA 62

Query: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128
           ATI+ EL+V HPAAK+LV+A + Q++E+GDG N  ++  GE LQ A  L+ MGLHPSEII
Sbjct: 63  ATIIRELDVIHPAAKMLVMAAQMQEQEMGDGTNYVVTLTGEFLQKAATLLEMGLHPSEII 122

Query: 129 SGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFICSLVADAC 188
           +G+ K   K  E++  ++    +  D+ +K++V   +K+A+ASKQ+G E+F+  ++ +AC
Sbjct: 123 TGFEKAGAKLQEIIESMIVYNLK--DITDKKEVTKCLKSAIASKQYGYEEFLSEIITNAC 182

Query: 189 IQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAKVAVFVGGV 248
           +QV PK   NFN+DNVRV K+ GGG+ ++SV++G V+  DA G+IKR+EKAK+AVF  G+
Sbjct: 183 LQVLPKKAVNFNIDNVRVTKIPGGGVTDTSVIKGFVIPMDAEGTIKRMEKAKIAVFTMGI 242

Query: 249 DTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCE 308
           D   TET G VLI   +EL  ++K EE  + E I A+A++G KVI+SG+ V E+ALH+ E
Sbjct: 243 DLGRTETTGKVLITNEDELLQFSKGEEDSIRETITAIANTGVKVIISGSTVSELALHYIE 302

Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNE 368
           R+K+M+++I SKF+LRR C+  GA  ++KL  P P++LG+ D V VEEIG  +  + +  
Sbjct: 303 RFKIMLVRIQSKFQLRRVCKAIGATPLVKLGAPIPEELGYCDEVLVEEIGSTKCCIFRQN 362

Query: 369 EGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEF 428
           +  + IST+V+RGST++ILDD+ERAIDDGVN +K M +D R + GA A EIE +R+++ F
Sbjct: 363 KEESEISTIVVRGSTNNILDDIERAIDDGVNVFKGMCKDGRFLAGAGAFEIEASRKLQAF 422

Query: 429 SFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEEGT 488
           +    GL QY+I ++AE+FE++P+TL+E +G ++ + IS++YA H  G T  G+D+E G 
Sbjct: 423 ADATPGLSQYSIRQYAEAFEIIPRTLAETSGHDSSKAISNIYAAHTKGNTNYGLDIESGQ 482

Query: 489 CKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPR 535
            K V  M++ D   +KLFA+K A + A TVLRVDQIIMSKPAGGP+
Sbjct: 483 PKSVLEMDVLDAFASKLFAIKLATNTANTVLRVDQIIMSKPAGGPK 526

[Close]

BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot
Match: Q3ZCI9 (T-complex protein 1 subunit theta OS=Bos taurus OX=9913 GN=CCT8 PE=1 SV=3)

HSP 1 Score: 546.2 bits (1406), Expect = 4.2e-154
Identity = 275/539 (51.02%), Postives = 389/539 (72.17%), Query Frame = 0


Query: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDA 68
           G   MLKEG KH SGL+EAV +NI ACK+L+  TRT+ GPNGMNKMVINHL+KLF+TNDA
Sbjct: 10  GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69

Query: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128
           ATI+ ELEVQHPAAK++V+A   Q++E+GDG N  + FAG LL+ AEEL+R+GL  SE+I
Sbjct: 70  ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVI 129

Query: 129 SGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFICSLVADAC 188
            GY     K  E+L +LV   ++N+  ++ ++V S +  +V SKQ+G E F+  L+A AC
Sbjct: 130 EGYEIACKKAHEILPDLVCCSAKNL--RDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQAC 189

Query: 189 IQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAKVAVFVGGV 248
           + + P +  +FNVDN+RV K+LG G+H+SSV+ GMV K +  G +  ++ AK+AV+    
Sbjct: 190 VSIFP-DSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 249

Query: 249 DTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCE 308
           D   TETKGTVLI +AEEL N++K EE  ++  +KA+AD+GA V+V+G  V +MALH+  
Sbjct: 250 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYAN 309

Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNE 368
           +Y +M+++++SK++LRR C+T GA A+ +L+ P  +++GH DSV + E+G  +V V K+E
Sbjct: 310 KYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHE 369

Query: 369 EGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEF 428
           +   +IST+VLRGSTD+++DD+ERA+DDGVNT+K + RD R+VPG  ATEIELA+++  +
Sbjct: 370 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 429

Query: 429 SFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEE-- 488
                GL+QYAI KFAE+FE +P+ L+EN+G+ A E+IS LYA H  G   VG+D+E   
Sbjct: 430 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 489

Query: 489 GTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQPAGMDED 546
              KD+    + D ++ K +A+K A +AA TVLRVDQIIM+KPAGGP+        DED
Sbjct: 490 PAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGKKDWDED 545

[Close]

BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot
Match: Q4R5J0 (T-complex protein 1 subunit theta OS=Macaca fascicularis OX=9541 GN=CCT8 PE=2 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.2e-153
Identity = 274/539 (50.83%), Postives = 389/539 (72.17%), Query Frame = 0


Query: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDA 68
           G   MLKEG KH SGL+EAV +NI ACK+L+  TRT+ GPNGMNKMVINHL+KLF+TNDA
Sbjct: 10  GFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDA 69

Query: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128
           ATI+ ELEVQHPAAK++V+A   Q++E+GDG N  + FAG LL+ AEEL+R+GL  SE+I
Sbjct: 70  ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129

Query: 129 SGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFICSLVADAC 188
            GY     K  E+L  LV   ++N+  ++ ++V S ++ ++ SKQ+G E F+  L+A AC
Sbjct: 130 EGYEIACRKAHEILPNLVCCSAKNL--RDVDEVSSLLRTSIMSKQYGNEVFLAKLIAQAC 189

Query: 189 IQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAKVAVFVGGV 248
           + + P +  +FNVDN+RV K+LG G+ +SSV+ GMV K +  G +  ++ AK+AV+    
Sbjct: 190 VSIFP-DSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 249

Query: 249 DTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCE 308
           D + TETKGTVLI TAEEL N++K EE  ++  +KA+AD+GA V+V+G  V +MALH+  
Sbjct: 250 DGTITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYAN 309

Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNE 368
           +Y +M+++++SK++LRR C+T GA A+ +L+ P  +++GH DSV + E+G  +V V K+E
Sbjct: 310 KYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVCLSEVGDTQVVVFKHE 369

Query: 369 EGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEF 428
           +   +IST+VLRGSTD+++DD+ERA+DDGVNT+K + RD R+VPG  ATEIELA+++  +
Sbjct: 370 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 429

Query: 429 SFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEE-- 488
                GL+QYAI KFAE+FE +P+ L+EN+G+ A E+IS LYA H  G   VG+D+E   
Sbjct: 430 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEV 489

Query: 489 GTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQPAGMDED 546
              KD+    I D ++ K +A+K A +AA TVLRVDQIIM+KPAGGP+        D+D
Sbjct: 490 PAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGKKDWDDD 545

[Close]

BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot
Match: P42932 (T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3)

HSP 1 Score: 543.9 bits (1400), Expect = 2.1e-153
Identity = 274/539 (50.83%), Postives = 390/539 (72.36%), Query Frame = 0


Query: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDA 68
           G   MLK+G KH SGL+EAV +NI ACK+L+  TRT+ GPNGMNKMVIN L+KLF+TNDA
Sbjct: 10  GFAQMLKDGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINRLEKLFVTNDA 69

Query: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128
           ATI+ ELEVQHPAAK++V+A   Q++E+GDG N  + FAG LL+ AEEL+R+GL  SE+I
Sbjct: 70  ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVI 129

Query: 129 SGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFICSLVADAC 188
           SGY     K  E+L ELV   ++N+  ++ ++V S ++ ++ SKQ+G E F+  L+A AC
Sbjct: 130 SGYEIACKKAHEILPELVCCSAKNL--RDVDEVSSLLRTSIMSKQYGSETFLAKLIAQAC 189

Query: 189 IQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAKVAVFVGGV 248
           + + P +  NFNVDN+RV K+LG G+++SSV+ GMV K +  G +  ++ AK+AV+    
Sbjct: 190 VSIFP-DSGNFNVDNIRVCKILGSGIYSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPF 249

Query: 249 DTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCE 308
           D   TETKGTVLI TAEEL N++K EE  ++  +KA+A +GA VIV+G  V ++ALH+  
Sbjct: 250 DGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIAGTGANVIVTGGKVADIALHYAN 309

Query: 309 RYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNE 368
           +Y +M+++++SK++LRR C+T GA A+ KL+ P  +++GH DSV + E+G  +V V K+E
Sbjct: 310 KYNIMLVRLNSKWDLRRLCKTVGATALPKLTPPVQEEMGHCDSVYLSEVGDTQVVVFKHE 369

Query: 369 EGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEF 428
           +   +IST+VLRGSTD+++DD+ERA+DDGVNT+K + RD R+VPG  ATEIELA+++  +
Sbjct: 370 KEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSY 429

Query: 429 SFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEE-- 488
                GL+QYAI KFAE+FE +P+ L+EN+G+ A E+IS LY+ H  G   VG+D+E   
Sbjct: 430 GETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEV 489

Query: 489 GTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQPAGMDED 546
              KD+   +I D ++ K +A+K A +AA TVLRVDQIIM+KPAGGP+        D+D
Sbjct: 490 PAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGKKDWDDD 545

[Close]

BLAST of CmaCh06G017300 vs. TAIR 10
Match: AT3G03960.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 885.9 bits (2288), Expect = 1.6e-257
Identity = 446/548 (81.39%), Postives = 503/548 (91.79%), Query Frame = 0


Query: 1   MGFQLPSHGIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 60
           +G  +  +GIQSMLKEG++HLSGLDEAV+KNI+ACK+LSTITRTSLGPNGMNKMVINHLD
Sbjct: 2   VGMSMQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLD 61

Query: 61  KLFITNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRM 120
           KLF+TNDAATIVNELE+QHPAAK+LVLA KAQQEEIGDGANLTISFAGELLQNAEELIRM
Sbjct: 62  KLFVTNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRM 121

Query: 121 GLHPSEIISGYTKGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQFGQEDFI 180
           GLHPSEIISGYTK ++K +E+L +LVE GSE MDV+NK++VISRM+AAVASKQFGQE+ I
Sbjct: 122 GLHPSEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEII 181

Query: 181 CSLVADACIQVCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLKSDAVGSIKRIEKAK 240
           CSLV DACIQVCPKNP NFNVDNVRV+KLLGGGLHNS +VRGMVLKSDAVGSIKR+EKAK
Sbjct: 182 CSLVTDACIQVCPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLKSDAVGSIKRMEKAK 241

Query: 241 VAVFVGGVDTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVG 300
           VAVF GGVDT+ATETKGTVLIH+AE+L+NYAKTEEAKVEELIKAVA+SGAKVIVSG ++G
Sbjct: 242 VAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKVIVSGGSIG 301

Query: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGA 360
           EMALHFCERYK+MVLKISSKFELRRFCRT GAVA LKLS+P+P+DLG+VDS+SVEEIGG 
Sbjct: 302 EMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSISVEEIGGV 361

Query: 361 RVTVVKNEEGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIE 420
            VT+ +NEEGGNSISTVVLRGSTDSILDDLERA+DDGVNTYKAM RDSRIVPGAAATEIE
Sbjct: 362 TVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 421

Query: 421 LARRVKEFSFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRV 480
           LA+R+KE++  E GLD+YAI K+AESFE VPKTL++NAGLNAMEII++LY  H SG T++
Sbjct: 422 LAQRLKEYANAEIGLDKYAITKYAESFEFVPKTLADNAGLNAMEIIAALYTGHGSGNTKL 481

Query: 481 GIDMEEGTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQIIMSKPAGGPRRGQQP- 540
           GID+EEG CKDVS   +WDL  TKLFALKYA+DAACTVLRVDQIIM+KPAGGPRR     
Sbjct: 482 GIDLEEGACKDVSETKVWDLFATKLFALKYASDAACTVLRVDQIIMAKPAGGPRRDAAQA 541

Query: 541 --AGMDED 546
             AG +ED
Sbjct: 542 AGAGAEED 549

[Close]

BLAST of CmaCh06G017300 vs. TAIR 10
Match: AT3G18190.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 240.7 bits (613), Expect = 2.7e-63
Identity = 140/505 (27.72%), Postives = 266/505 (52.67%), Query Frame = 0


Query: 31  NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDAATIVNELEVQHPAAKILVLAGK 90
           NI++ + +S   RTSLGP GM+KM+     ++ ITND ATI+N++EV  PAAK+LV   K
Sbjct: 33  NINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVELSK 92

Query: 91  AQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKGINKTIEVLNELVEKGS 150
           +Q    GDG    +  AG LL+  + L+  G+HP+ I     K   K I++L  +    +
Sbjct: 93  SQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAM----A 152

Query: 151 ENMDVQNKEQVISRMKAAVASKQFGQ-EDFICSLVADACIQVC-PKNPQNFNVDNVRVAK 210
             +++ +++ ++     ++ SK   Q    +  L  DA + V  P+ P+  ++ ++++ K
Sbjct: 153 VPVELTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDPEKPEIVDLRDIKIVK 212

Query: 211 LLGGGLHNSSVVRGMVLK---SDAVGSIKRIEKAKVAVFVGGVDTSATETKGTVLIHTAE 270
            LGG + ++  V+G+V     S A G   R+E AK+AV    +    T+ + ++++    
Sbjct: 213 KLGGTVDDTHTVKGLVFDKKVSRAAGGPTRVENAKIAVIQFQISPPKTDIEQSIVVSDYT 272

Query: 271 ELQNYAKTEEAKVEELIKAVADSGAKVI-----VSGAAVGEMALHFCERYKLMVLKISSK 330
           ++    K E   +  +IK +  +G  V+     +   AV +++LH+  + K+MV+K   +
Sbjct: 273 QMDRILKEERNYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKIMVIKDVER 332

Query: 331 FELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVVKNEEGGNSISTVVLR 390
            E+    +T   + +  +     + LGH D V    +G  ++  +   +     ++V++R
Sbjct: 333 DEIEFVTKTLNCLPIANIEHFRAEKLGHADLVEEASLGDGKILKITGIKDMGRTTSVLVR 392

Query: 391 GSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEFSFKETGLDQYAI 450
           GS   +LD+ ER++ D +   + +     ++ G  A EIEL+R++  ++    G++ Y +
Sbjct: 393 GSNQLVLDEAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKVLHGMEGYCV 452

Query: 451 AKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTRVGIDMEEGTCKDVSTMNIWDL 510
             FAE+ E++P TL+ENAGLN + I++ L  +HA G    GI++ +G   ++   N+   
Sbjct: 453 KSFAEALEVIPYTLAENAGLNPIAIVTELRNKHAQGEINAGINVRKGQITNILEENVVQP 512

Query: 511 HITKLFALKYAADAACTVLRVDQII 526
            +    A+  A +    +L++D I+
Sbjct: 513 LLVSTSAITLATECVRMILKIDDIV 533

[Close]

BLAST of CmaCh06G017300 vs. TAIR 10
Match: AT3G20050.1 (T-complex protein 1 alpha subunit )

HSP 1 Score: 231.1 bits (588), Expect = 2.1e-60
Identity = 149/516 (28.88%), Postives = 274/516 (53.10%), Query Frame = 0


Query: 30  KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDAATIVNELEVQHPAAKILVLAG 89
           +N+ AC+ +S I +TSLGP G++KM+++ +  + ITND ATI+  LEV+HPAAK+LV   
Sbjct: 23  QNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELA 82

Query: 90  KAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKGINKTIEVLNELVEKG 149
           + Q  E+GDG    +  A ELL+ A +L+R  +HP+ IISGY   + ++ + + E +   
Sbjct: 83  ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTK 142

Query: 150 SENMDVQNKEQVISRMKAAVASKQF-GQEDFICSLVADACIQVCPKNPQ---NFNVDNVR 209
            E +    K  +I+  K +++SK   G  DF  +LV +A + V   N +    + +  + 
Sbjct: 143 VEKL---GKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGIN 202

Query: 210 VAKLLGGGLHNSSVVRGMVLKSD--AVGSIKRIEKAKVAVFVGGVDTSATETKGTVLIHT 269
           + K  G    +S ++ G  L +   A G   R+  AK+A     +  +  +    V+++ 
Sbjct: 203 ILKAHGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVND 262

Query: 270 AEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCERYKLMVLKISSKFEL 329
             EL+   + E    +E I+ +  +GA VI++   + +MAL +      + ++   K ++
Sbjct: 263 PRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDM 322

Query: 330 RRFCRTTGAVAMLKLSQP------NPDDLGHVDSVSVEEIGGARVTVVKNEEGGNSISTV 389
           R   + TGA  +   +        +P  LG  D V  E I    V ++K  +  +++S +
Sbjct: 323 RHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVS-L 382

Query: 390 VLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEFSFKETGLDQ 449
           +LRG+ D +LD++ERA+ D +   K     + +V G  A E  L+  ++  +      +Q
Sbjct: 383 ILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALSVYLEHLATTLGSREQ 442

Query: 450 YAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTR--------VGIDMEEGTC 509
            AIA+FA++  ++PK L+ NA  +A E+++ L A H +  T+        +G+D+  GT 
Sbjct: 443 LAIAEFADALLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTI 502

Query: 510 KDVSTMNIWDLHITKLFALKYAADAACTVLRVDQII 526
           ++     + +  ++K+  +++A +AA T+LR+D +I
Sbjct: 503 RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI 534

[Close]

BLAST of CmaCh06G017300 vs. TAIR 10
Match: AT3G11830.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 216.5 bits (550), Expect = 5.4e-56
Identity = 143/542 (26.38%), Postives = 268/542 (49.45%), Query Frame = 0


Query: 13  MLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDAATIV 72
           +LKEG     G  + V  NI+AC  +  + RT+LGP GM+K++ +    + I+ND ATI+
Sbjct: 11  LLKEGTDTSQGKAQLV-SNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIM 70

Query: 73  NELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYT 132
             L++ HPAAKILV   K+Q  E+GDG    +  A E L+ A+  I  G+H   +I  Y 
Sbjct: 71  KLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSYR 130

Query: 133 KGINKTIEVLNELVEKGSENMDVQNKEQVISRMKAAVASKQF--GQEDFICSLVADACIQ 192
                 I  + EL     E   V+ K+ ++++  A   S +   G+++F  ++V DA + 
Sbjct: 131 TASTLAIAKVKELA-VSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMA 190

Query: 193 VCPKNPQNFNVDNVRVAKLLGGGLHNSSVVRGMVLK-----SDAVGSIKRIEKAKVAVFV 252
           +   N    N+  + + K+ GG + +S +V G+  K     +      K+    K+ +  
Sbjct: 191 I--GNDDRLNL--IGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLN 250

Query: 253 GGVDTSATETKGTVLIHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALH 312
             ++  + +    + +    + Q+    E   + + +    +SGAKV++S  A+G++A  
Sbjct: 251 IELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGAKVVLSRLAIGDLATQ 310

Query: 313 FCERYKLMVLKISSKFELRRFCRTTGAVAMLKLSQPNPDDLGHVDSVSVEEIGGARVTVV 372
           +     +      ++ +L R     G      ++    + LG  +    +++GG R  + 
Sbjct: 311 YFADRDIFCAGRVAEEDLNRVAAAAGGTVQTSVNNIIDEVLGTCEIFEEKQVGGERFNIF 370

Query: 373 KNEEGGNSISTVVLRGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRV 432
                G + +T+VLRG  D  +++ ER++ D +   +   ++S +VPG  A ++E+++ +
Sbjct: 371 SGCPSGRT-ATIVLRGGADQFIEEAERSLHDAIMIVRRAVKNSTVVPGGGAIDMEISKYL 430

Query: 433 KEFSFKETGLDQYAIAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHA--SGT-TRVGI 492
           ++ S    G  Q  I  +A++ E++P+ L +NAG +A ++++ L  +HA  SG     G+
Sbjct: 431 RQHSRTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAMQSGEGASYGV 490

Query: 493 DMEEGTCKDVSTMNIWDLHITKLFALKYAADAACTVLRVDQII---MSKPAGGPRRGQQP 542
           D+  G   D     +W+  + K+ A+  A +AAC +L VD+ +    S+ A G   G   
Sbjct: 491 DINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGDAAGAMG 545

[Close]

BLAST of CmaCh06G017300 vs. TAIR 10
Match: AT5G26360.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-55
Identity = 145/522 (27.78%), Postives = 267/522 (51.15%), Query Frame = 0


Query: 31  NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFITNDAATIVNELEVQHPAAKILVLAGK 90
           NI A K ++ I RT+LGP  M KM+++    + +TND   I+ EL+V HPAAK ++   +
Sbjct: 24  NIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83

Query: 91  AQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKGINKTIEVLNELVEKGS 150
            Q EE+GDG    I  AGE+L  AE  +    HP+ I   Y K +  +I VL+++    +
Sbjct: 84  TQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKI----A 143

Query: 151 ENMDVQNKEQVISRMKAAVASK---QFGQEDFICSLVADACIQVCPKNPQNF-NVD---N 210
            ++D+ ++ QV+  +K+ + +K   QFG  D I  L  DA   V     Q    VD    
Sbjct: 144 MSIDINDRSQVLGLVKSCIGTKFTSQFG--DLIADLAIDATTTVGVDLGQGLREVDIKKY 203

Query: 211 VRVAKLLGGGLHNSSVVRGMVLKSDAV--GSIKR-IEKAKVAVFVGGVDTSATETKGTVL 270
           ++V K+ GG   +S V++G++   D V  G +KR I   ++ +    ++    E +    
Sbjct: 204 IKVEKVPGGQFEDSEVLKGVMFNKDVVAPGKMKRKIVNPRIILLDCPLEYKKGENQTNAE 263

Query: 271 IHTAEELQNYAKTEEAKVEELIKAVADSGAKVIVSGAAVGEMALHFCERYKLMVLKISSK 330
           +   E+ +   K EE  +E +   +      ++++   + ++A H+  +  +  ++   K
Sbjct: 264 LVREEDWEVLLKLEEEYIENICVQILKFKPDLVITEKGLSDLACHYFSKAGVSAIRRLRK 323

Query: 331 FELRRFCRTTGAVAMLKLSQPNPDDLG-HVDSVSVEEIGGARVTVVKNEEGGNSISTVVL 390
            +  R  +  GAV + +  +    D+G       V++IG    + + + +   +  TV+L
Sbjct: 324 TDNNRIAKACGAVIVNRPDELQESDIGTGAGLFEVKKIGDDFFSFIVDCKEPKA-CTVLL 383

Query: 391 RGSTDSILDDLERAIDDGVNTYKAMARDSRIVPGAAATEIELARRVKEFSFKETGLDQYA 450
           RG +   ++++ER + D ++  + + ++ ++VPG  ATE+ ++  +K+ S    G++++ 
Sbjct: 384 RGPSKDFINEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSATIEGIEKWP 443

Query: 451 IAKFAESFEMVPKTLSENAGLNAMEIISSLYAEHASGTTR-VGIDMEEGTCKDVSTMNIW 510
               A +FE +P+TL++N G+N +  +++L  +HA+G     GID   G   D+    IW
Sbjct: 444 YEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWTGIDGNTGAIADMKESKIW 503

Query: 511 DLHITKLFALKYAADAACTVLRVDQII-----MSKPAGGPRR 536
           D +  K    K A +AAC +LR+D I+        P  GP +
Sbjct: 504 DSYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGPSK 538

The following BLAST results are available for this feature:

BLAST of CmaCh06G017300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K05	2.2e-256	81.39	T-complex protein 1 subunit theta OS=Arabidopsis thaliana OX=3702 GN=CCT8 PE=1 S...	[more]
Q552J0	8.2e-158	51.90	T-complex protein 1 subunit theta OS=Dictyostelium discoideum OX=44689 GN=cct8 P...	[more]
Q3ZCI9	4.2e-154	51.02	T-complex protein 1 subunit theta OS=Bos taurus OX=9913 GN=CCT8 PE=1 SV=3	[more]
Q4R5J0	1.2e-153	50.83	T-complex protein 1 subunit theta OS=Macaca fascicularis OX=9541 GN=CCT8 PE=2 SV...	[more]
P42932	2.1e-153	50.83	T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3	[more]

BLAST of CmaCh06G017300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03960.1	1.6e-257	81.39	TCP-1/cpn60 chaperonin family protein	[more]
AT3G18190.1	2.7e-63	27.72	TCP-1/cpn60 chaperonin family protein	[more]
AT3G20050.1	2.1e-60	28.88	T-complex protein 1 alpha subunit	[more]
AT3G11830.1	5.4e-56	26.38	TCP-1/cpn60 chaperonin family protein	[more]
AT5G26360.1	1.2e-55	27.78	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 264..284
None	No IPR available	PANTHER	PTHR11353:SF202	BNAC05G47590D PROTEIN	coord: 11..536
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 410..422 score: 37.93 coord: 62..80 score: 37.06 coord: 40..56 score: 35.35 coord: 376..398 score: 22.7 coord: 92..111 score: 30.55
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 11..536
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 220..373 e-value: 1.7E-148 score: 497.4
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 217..381
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 150..408 e-value: 1.7E-148 score: 497.4
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 157..408
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 38..528 e-value: 5.2E-150 score: 500.3
IPR012721	T-complex protein 1, theta subunit	TIGRFAM	TIGR02346	TIGR02346	coord: 9..538 e-value: 1.5E-250 score: 830.1
IPR012721	T-complex protein 1, theta subunit	CDD	cd03341	TCP1_theta	coord: 19..528 e-value: 0.0 score: 758.294
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 31..525 e-value: 1.7E-148 score: 497.4
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 21..529
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 43..55
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 64..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G017300.1	CmaCh06G017300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005832	chaperonin-containing T-complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051082	unfolded protein binding