CmaCh06G016580 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATACCGATTAGTAATGTGGTGCTTCAGCAGTCGCCGACGACAATGACGACGCTACCGGAAAATCAATCGATGAGATTCGAGAATGACTTTAGGCTCGCCGATCCATCTATGAGTGAGGCGGAGATTTATCATAACGCTTATCTGAATCTATATAACGAAGATTTGTCTCCGTTCGAGACTTCTATCAACGGCGGCTATGAGGCAGAGTTTTATTGTCCTAATGAAACGATGCCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTCGGCTCCGGCTCCAACTCCGACGTTTTATTGCCCTAATTATAGCTATGAAACGATGTCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCCAGCTCCAGCTCCGGCTCCGGCGTTTTATTGCCCTAATTATAGCTATGAAACGATGCTGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTTGGCTCCGGCTCCGGCTCCGGCTCCGACTCCGACTCCGACTCCGACTCCAATGGAGAATTCTGGTTTTCTTTCAGATGTCGTTAATTTTTGCTCCAATAATCAGATGCATCGGGTAGCGGCAAACAATGGCAGAGTCGGCCAATCATCAAGAATGAGGATAATTTGGACAGTTGACGAGCACAAGTAAAACAACTAAAATAACTAACTGTGTAATTTGTGTAATAATTGTGCTTCAAAAATGAAACAATTGTGTAATTTTTTTTTTTTTTTTTTTTTTGGTGCAGGTTATTTCTGGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACTCACACGCAAGTAGCTAGTCACGCTCAAAAGTTTTTCACTCGGCAACAAATACCGAAAGAACAACGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACGACCACGACCACGACCACCACCGACACCGCCACTGCCATCGTTGACAAACTATTCCCCGTTGCGCATGGATCCAGATCCGACCCAACCATATGAGCAATTCAATAATTACGTGCCCAATGTTGAACAGCTACCGCTGCCATCGCAGCCAGAATTTGTGCATAACCAAAACGTAAACTACTGA ATGGCGATACCGATTAGTAATGTGGTGCTTCAGCAGTCGCCGACGACAATGACGACGCTACCGGAAAATCAATCGATGAGATTCGAGAATGACTTTAGGCTCGCCGATCCATCTATGAGTGAGGCGGAGATTTATCATAACGCTTATCTGAATCTATATAACGAAGATTTGTCTCCGTTCGAGACTTCTATCAACGGCGGCTATGAGGCAGAGTTTTATTGTCCTAATGAAACGATGCCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTCGGCTCCGGCTCCAACTCCGACGTTTTATTGCCCTAATTATAGCTATGAAACGATGTCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCCAGCTCCAGCTCCGGCTCCGGCGTTTTATTGCCCTAATTATAGCTATGAAACGATGCTGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTTGGCTCCGGCTCCGGCTCCGGCTCCGACTCCGACTCCGACTCCGACTCCAATGGAGAATTCTGGTTTTCTTTCAGATGTCGTTAATTTTTGCTCCAATAATCAGATGCATCGGGTAGCGGCAAACAATGGCAGAGTCGGCCAATCATCAAGAATGAGGATAATTTGGACAGTTGACGAGCACAAGTTATTTCTGGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACTCACACGCAAGTAGCTAGTCACGCTCAAAAGTTTTTCACTCGGCAACAAATACCGAAAGAACAACGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACGACCACGACCACGACCACCACCGACACCGCCACTGCCATCGTTGACAAACTATTCCCCGTTGCGCATGGATCCAGATCCGACCCAACCATATGAGCAATTCAATAATTACGTGCCCAATGTTGAACAGCTACCGCTGCCATCGCAGCCAGAATTTGTGCATAACCAAAACGTAAACTACTGA ATGGCGATACCGATTAGTAATGTGGTGCTTCAGCAGTCGCCGACGACAATGACGACGCTACCGGAAAATCAATCGATGAGATTCGAGAATGACTTTAGGCTCGCCGATCCATCTATGAGTGAGGCGGAGATTTATCATAACGCTTATCTGAATCTATATAACGAAGATTTGTCTCCGTTCGAGACTTCTATCAACGGCGGCTATGAGGCAGAGTTTTATTGTCCTAATGAAACGATGCCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTCGGCTCCGGCTCCAACTCCGACGTTTTATTGCCCTAATTATAGCTATGAAACGATGTCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCCAGCTCCAGCTCCGGCTCCGGCGTTTTATTGCCCTAATTATAGCTATGAAACGATGCTGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTTGGCTCCGGCTCCGGCTCCGGCTCCGACTCCGACTCCGACTCCGACTCCAATGGAGAATTCTGGTTTTCTTTCAGATGTCGTTAATTTTTGCTCCAATAATCAGATGCATCGGGTAGCGGCAAACAATGGCAGAGTCGGCCAATCATCAAGAATGAGGATAATTTGGACAGTTGACGAGCACAAGTTATTTCTGGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACTCACACGCAAGTAGCTAGTCACGCTCAAAAGTTTTTCACTCGGCAACAAATACCGAAAGAACAACGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAGAAACACGAACACGATCACGACCACGACCACGACCACGACCACCACCGACACCGCCACTGCCATCGTTGACAAACTATTCCCCGTTGCGCATGGATCCAGATCCGACCCAACCATATGAGCAATTCAATAATTACGTGCCCAATGTTGAACAGCTACCGCTGCCATCGCAGCCAGAATTTGTGCATAACCAAAACGTAAACTACTGA MAIPISNVVLQQSPTTMTTLPENQSMRFENDFRLADPSMSEAEIYHNAYLNLYNEDLSPFETSINGGYEAEFYCPNETMPFCAPSTYNNLSPSAPAPTPTFYCPNYSYETMSFCAPSTYNNLSPPAPAPAPAFYCPNYSYETMLFCAPSTYNNLSPLAPAPAPAPTPTPTPTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQPYEQFNNYVPNVEQLPLPSQPEFVHNQNVNY Homology
BLAST of CmaCh06G016580 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CmaCh06G016580 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-14 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of CmaCh06G016580 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-14 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of CmaCh06G016580 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.2e-13 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of CmaCh06G016580 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.2e-09 Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 0
BLAST of CmaCh06G016580 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 95.5 bits (236), Expect = 9.2e-20 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of CmaCh06G016580 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator ) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-16 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of CmaCh06G016580 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-16 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CmaCh06G016580 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-16 Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 0
BLAST of CmaCh06G016580 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-14 Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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