CmaCh06G015710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G015710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WRKY transcription factor
Location	Cma_Chr06: 9833175 .. 9834847 (+)
RNA-Seq Expression	CmaCh06G015710
Synteny	CmaCh06G015710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAACTCCGATCGATCCAAAATGGAGAAAAAATTTGAAGACTCGTTGATGGGGTCGGCAACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATCATAAAGCTTCTTGTTGTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATATTCGATTTGCTTTCTACTACCGTGCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCGCCGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAAGAACGCCAAGACTTCCAAAGTGTAAGAGATCATTATTATTGGTCTCGATCTGATTTTCACGATCCTATGATATTATCTGTTTTAGATCTAAGTTCGACATTTACTCCATTTATTCATATTTTTTAAGAATTTATTGATTATAATGAGGAAATTTTGGATGTAATTAATGGGGTTGTGTTGATTTGATTTAGTTGACTAATTTTGAGCTTCATGATTCTTCTCCTTTTTTTTGCTTTTTTTTCTCAAAAAGAAATGAAAAAAGTTGGAGATTTTATTTATTTTTAATTAATTAATTAATTTTCTTTTTACTGTTTTTGTTTTAGGTTGAAGCCAAAGAAGAACCAGAAGAAGCAACGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGACAGTGAAGAACAGTCCTTATCCTAGGTTTGTCTTTTTCGTATATTTTTACAATGATATAATATCATTTACTTCGAATTTAAATTTAAAAGGCCGAGTATTTTGTTTATAATATAGAAGTTATTATCGTTGCACGACATCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATCCGAATACTATCGGAATCCACCAACTGCCTCGTTGCCGATCACGACGTTGCCACCACCGGAATTCTATTCCAACACAACATTCCCGGCCAACCCTTCATGTATAACCCTCCGCAACCGTTTCTAACAAACGAATCGTCGTTCTTGAGTCCTCGTCCTCCTCCGCCTTCCCTTTCACCGCCATTGTTGTCGTCTCGAGCTTCCTTGCTTCAAGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGAAAAATTCTCTTTTGGTATGCCTTAGAAATTCAAATCAACCATTTTCCTTTGCTTTTTTTAGCCGATTATAATCCCACAAGTACGAAACGCTTTCTCTATGAGTATTATATTCTTTGTTTATTATGAACTTCATCGGTTTTAGCTCAATACGTTCATCGTCCATCTCTTTAGAATTAGGGTTTAGGGTTTTTCCGTCACATTGGGATGTTACAAAACCGAACAATCATATATAAAATAAGAAGGAGATGATCCAACACGTATACGGATAGAAA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAACTCCGATCGATCCAAAATGGAGAAAAAATTTGAAGACTCGTTGATGGGGTCGGCAACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATCATAAAGCTTCTTGTTGTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATATTCGATTTGCTTTCTACTACCGTGCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCGCCGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAAGAACGCCAAGACTTCCAAAGTGTTGAAGCCAAAGAAGAACCAGAAGAAGCAACGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGACAGTGAAGAACAGTCCTTATCCTAGAAGTTATTATCGTTGCACGACATCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATCCGAATACTATCGGAATCCACCAACTGCCTCGTTGCCGATCACGACGTTGCCACCACCGGAATTCTATTCCAACACAACATTCCCGGCCAACCCTTCATGTATAACCCTCCGCAACCGTTTCTAACAAACGAATCGTCGTTCTTGAGTCCTCGTCCTCCTCCGCCTTCCCTTTCACCGCCATTGTTGTCGTCTCGAGCTTCCTTGCTTCAAGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGAAAAATTCTCTTTTGGTATGCCTTAGAAATTCAAATCAACCATTTTCCTTTGCTTTTTTTAGCCGATTATAATCCCACAAGTACGAAACGCTTTCTCTATGAGTATTATATTCTTTGTTTATTATGAACTTCATCGGTTTTAGCTCAATACGTTCATCGTCCATCTCTTTAGAATTAGGGTTTAGGGTTTTTCCGTCACATTGGGATGTTACAAAACCGAACAATCATATATAAAATAAGAAGGAGATGATCCAACACGTATACGGATAGAAA

Coding sequence (CDS)

ATGGAGAAAAAATTTGAAGACTCGTTGATGGGGTCGGCAACTTCTACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATCATAAAGCTTCTTGTTGTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATATTCGATTTGCTTTCTACTACCGTGCCGCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCGCCGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTGCTCCTATCGAAGAGGTTGACAAGAACGCCAAGACTTCCAAAGTGTTGAAGCCAAAGAAGAACCAGAAGAAGCAACGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTACCGGTGGCGGAAGTACGGTCAAAAGACAGTGAAGAACAGTCCTTATCCTAGAAGTTATTATCGTTGCACGACATCACAATGCGGTGTGAAAAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATCCGAATACTATCGGAATCCACCAACTGCCTCGTTGCCGATCACGACGTTGCCACCACCGGAATTCTATTCCAACACAACATTCCCGGCCAACCCTTCATGTATAACCCTCCGCAACCGTTTCTAACAAACGAATCGTCGTTCTTGAGTCCTCGTCCTCCTCCGCCTTCCCTTTCACCGCCATTGTTGTCGTCTCGAGCTTCCTTGCTTCAAGACAATGGGCTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGA

Protein sequence

MEKKFEDSLMGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDHKASCCSSSSFDLFGGGIGFHDFYNPSSIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPTPNSSSVSNSSSNEAAPIEEVDKNAKTSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILFQHNIPGQPFMYNPPQPFLTNESSFLSPRPPPPSLSPPLLSSRASLLQDNGLLQDLVPLQVRKEPKDEQNG

Homology

[Close]

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.2e-45
Identity = 150/345 (43.48%), Postives = 187/345 (54.20%), Query Frame = 0


Query: 14  TSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDHK-ASCCSSSSFDLFGGGIGFHDFYNPS 73
           TS+  +  + F D      + F    DL   DH+ AS  +SSSF        F  F  P+
Sbjct: 73  TSSLPFPYSYFEDHSSNNPNSF---LDLLRQDHQFASSSNSSSF-------SFDAFPLPN 132

Query: 74  SIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPT-PNSSSVSNSSSNEAA-------- 133
           +  +    T  PL            ESSEV+N  PT PNS+SVS SSSNEAA        
Sbjct: 133 NNNNTSFFTDLPLPQ---------AESSEVVNTTPTSPNSTSVS-SSSNEAANDNNSGKE 192

Query: 134 ---PIEEVDKNAKTSKVLKP-----KKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQK 193
                +E     +  K  KP     KKNQKK RE RFAF+TKSDID+LDDGYRWRKYGQK
Sbjct: 193 VTVKDQEEGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQK 252

Query: 194 TVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSE 253
            VKNSPYPRSYYRCTT  CGVKKRVERSS D SIV+TTYEGQHTH  P+ PRG I +L+ 
Sbjct: 253 AVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLTS 312

Query: 254 STNCLVADHDVATTGILFQHNIPGQPFM----YNPPQPFLTNESSFLSPRP-------PP 313
                + DH  ATT      +IP   ++    + P   +  N  S ++ R        P 
Sbjct: 313 P----ILDHG-ATTASSSSFSIPQPRYLLTQHHQPYNMYNNNSLSMINRRSSDGTFVNPG 372

Query: 314 PSLSPP--------LLSSRASLLQDNGLLQDLVPLQVRKEPKDEQ 322
           PS S P          +S +S ++D+GLLQD++P Q+R +  + Q
Sbjct: 373 PSSSFPGFGYDMSQASTSTSSSIRDHGLLQDILPSQIRSDTINTQ 392

[Close]

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot
Match: O22900 (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 115/275 (41.82%), Postives = 148/275 (53.82%), Query Frame = 0


Query: 71  PSSIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPTPNSSSVSNSSS----------- 130
           PS+         PP +  ++S   ++     ++N P TPNSSS+S++SS           
Sbjct: 68  PSAKLSSSIIQAPPSEQLVTSKVESLCSDHLLINPPATPNSSSISSASSEALNEEKPKTE 127

Query: 131 -NEAAPIEEVDKNAKTSKVLKPKK-NQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTV 190
            NE    E+  + + T K LK KK NQK+QRE R AFMTKS++DHL+DGYRWRKYGQK V
Sbjct: 128 DNEEEGGEDQQEKSHTKKQLKAKKNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKAV 187

Query: 191 KNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPR--------GS 250
           KNSP+PRSYYRCTT+ C VKKRVERS  D S V+TTYEGQHTH SP+  R        GS
Sbjct: 188 KNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSRPISTGGFFGS 247

Query: 251 IRILSESTN-CLVADHDVAT-------TGILFQHNIPGQPFMYNPPQPFLTNESSFLSPR 310
               S   N C     D +T         + + H    Q  M           + +L+  
Sbjct: 248 SGAASSLGNGCFGFPIDGSTLISPQFQQLVQYHHQQQQQELM-----SCFGGVNEYLNSH 307

Query: 311 PPPPSLSPPLLSSRASLLQDNGLLQDLVPLQVRKE 317
                    +  SR  L++DNGLLQD+VP  + KE
Sbjct: 308 ANEYGDDNRVKKSRV-LVKDNGLLQDVVPSHMLKE 336

[Close]

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot
Match: Q9C983 (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.0e-35
Identity = 109/244 (44.67%), Postives = 136/244 (55.74%), Query Frame = 0


Query: 76  DLLSTTVPPLQPPLSSPSSTVPESSEV--LNAPPTPNSSSVSNSSSNEAAPIEEVDKNAK 135
           DL  TT        SS SS+   S  V   N  P+  SSS  + + N  A  E+      
Sbjct: 59  DLTQTTGVKPTTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTP--PP 118

Query: 136 TSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQ 195
            + V + KK QK+ R+PRFAFMTKSD+D+L+DGYRWRKYGQK VKNSP+PRSYYRCT S+
Sbjct: 119 ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR 178

Query: 196 CGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILF 255
           C VKKRVERSS D SIVITTYEGQH HQ+   PRG I          +  HD        
Sbjct: 179 CTVKKRVERSSDDPSIVITTYEGQHCHQTIGFPRGGI----------LTAHD--PHSFTS 238

Query: 256 QHNIP---GQPFMYNPPQPFLTNESSFLSPRPPPPSLSPPLLSSRASLLQDNGLLQDLVP 315
            H++P     P+ Y      L  +++  SPR P P+      +   S   + GLL D+VP
Sbjct: 239 HHHLPPPLPNPYYYQELLHQLHRDNNAPSPRLPRPTTED---TPAVSTPSEEGLLGDIVP 285

[Close]

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot
Match: Q8VWJ2 (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-32
Identity = 96/204 (47.06%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 61  GGIGFHDFYNPS--SIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAP------------ 120
           G +   + +NPS  S  D L ++    +  L       P SSEV N+             
Sbjct: 34  GNLPSQNGFNPSTYSFTDCLQSSPAAYESLLQKTFGLSPSSSEVFNSSIDQEPNRDVTND 93

Query: 121 --------PTPNSSSVSNSSSNEA-APIEEVDKNAK-----------TSKVLKPKKNQ-K 180
                    T    S SNSSS+EA  P E+  K+ +           + KV K KK + K
Sbjct: 94  VINGGACNETETRVSPSNSSSSEADHPGEDSGKSRRKRELVGEEDQISKKVGKTKKTEVK 153

Query: 181 KQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQCGVKKRVERSSS 230
           KQREPR +FMTKS++DHL+DGYRWRKYGQK VKNSPYPRSYYRCTT +C VKKRVERS  
Sbjct: 154 KQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQ 213

[Close]

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot
Match: Q93WV4 (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32
Identity = 83/159 (52.20%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 72  SSIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPTPNSSSVSNSSSNEAAPIEEVDKN 131
           SS F  +S +V      L+S S  V  SS      P  N++  S+   +    +  V ++
Sbjct: 46  SSPFQSVSPSVNNPYLNLTSNSPVVSSSSN--EGEPKENTNDKSDQMEDNEGDLHGVGES 105

Query: 132 AKTSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTT 191
           +K       KK +KK+RE R AFMTKS+IDHL+DGYRWRKYGQK VKNSPYPRSYYRCTT
Sbjct: 106 SKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTT 165

Query: 192 SQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSI 231
            +C VKKRVERS  D SIVITTYEG+H H  P   RG++
Sbjct: 166 QKCNVKKRVERSFQDPSIVITTYEGKHNHPIPSTLRGTV 202

[Close]

BLAST of CmaCh06G015710 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 )

HSP 1 Score: 182.6 bits (462), Expect = 5.1e-46
Identity = 150/345 (43.48%), Postives = 187/345 (54.20%), Query Frame = 0


Query: 14  TSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDHK-ASCCSSSSFDLFGGGIGFHDFYNPS 73
           TS+  +  + F D      + F    DL   DH+ AS  +SSSF        F  F  P+
Sbjct: 73  TSSLPFPYSYFEDHSSNNPNSF---LDLLRQDHQFASSSNSSSF-------SFDAFPLPN 132

Query: 74  SIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPT-PNSSSVSNSSSNEAA-------- 133
           +  +    T  PL            ESSEV+N  PT PNS+SVS SSSNEAA        
Sbjct: 133 NNNNTSFFTDLPLPQ---------AESSEVVNTTPTSPNSTSVS-SSSNEAANDNNSGKE 192

Query: 134 ---PIEEVDKNAKTSKVLKP-----KKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQK 193
                +E     +  K  KP     KKNQKK RE RFAF+TKSDID+LDDGYRWRKYGQK
Sbjct: 193 VTVKDQEEGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQK 252

Query: 194 TVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSE 253
            VKNSPYPRSYYRCTT  CGVKKRVERSS D SIV+TTYEGQHTH  P+ PRG I +L+ 
Sbjct: 253 AVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFPMTPRGHIGMLTS 312

Query: 254 STNCLVADHDVATTGILFQHNIPGQPFM----YNPPQPFLTNESSFLSPRP-------PP 313
                + DH  ATT      +IP   ++    + P   +  N  S ++ R        P 
Sbjct: 313 P----ILDHG-ATTASSSSFSIPQPRYLLTQHHQPYNMYNNNSLSMINRRSSDGTFVNPG 372

Query: 314 PSLSPP--------LLSSRASLLQDNGLLQDLVPLQVRKEPKDEQ 322
           PS S P          +S +S ++D+GLLQD++P Q+R +  + Q
Sbjct: 373 PSSSFPGFGYDMSQASTSTSSSIRDHGLLQDILPSQIRSDTINTQ 392

[Close]

BLAST of CmaCh06G015710 vs. TAIR 10
Match: AT2G47260.1 (WRKY DNA-binding protein 23 )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 115/275 (41.82%), Postives = 148/275 (53.82%), Query Frame = 0


Query: 71  PSSIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAPPTPNSSSVSNSSS----------- 130
           PS+         PP +  ++S   ++     ++N P TPNSSS+S++SS           
Sbjct: 68  PSAKLSSSIIQAPPSEQLVTSKVESLCSDHLLINPPATPNSSSISSASSEALNEEKPKTE 127

Query: 131 -NEAAPIEEVDKNAKTSKVLKPKK-NQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTV 190
            NE    E+  + + T K LK KK NQK+QRE R AFMTKS++DHL+DGYRWRKYGQK V
Sbjct: 128 DNEEEGGEDQQEKSHTKKQLKAKKNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKAV 187

Query: 191 KNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPR--------GS 250
           KNSP+PRSYYRCTT+ C VKKRVERS  D S V+TTYEGQHTH SP+  R        GS
Sbjct: 188 KNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSRPISTGGFFGS 247

Query: 251 IRILSESTN-CLVADHDVAT-------TGILFQHNIPGQPFMYNPPQPFLTNESSFLSPR 310
               S   N C     D +T         + + H    Q  M           + +L+  
Sbjct: 248 SGAASSLGNGCFGFPIDGSTLISPQFQQLVQYHHQQQQQELM-----SCFGGVNEYLNSH 307

Query: 311 PPPPSLSPPLLSSRASLLQDNGLLQDLVPLQVRKE 317
                    +  SR  L++DNGLLQD+VP  + KE
Sbjct: 308 ANEYGDDNRVKKSRV-LVKDNGLLQDVVPSHMLKE 336

[Close]

BLAST of CmaCh06G015710 vs. TAIR 10
Match: AT1G69310.1 (WRKY DNA-binding protein 57 )

HSP 1 Score: 152.1 bits (383), Expect = 7.4e-37
Identity = 109/244 (44.67%), Postives = 136/244 (55.74%), Query Frame = 0


Query: 76  DLLSTTVPPLQPPLSSPSSTVPESSEV--LNAPPTPNSSSVSNSSSNEAAPIEEVDKNAK 135
           DL  TT        SS SS+   S  V   N  P+  SSS  + + N  A  E+      
Sbjct: 59  DLTQTTGVKPTTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTP--PP 118

Query: 136 TSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQ 195
            + V + KK QK+ R+PRFAFMTKSD+D+L+DGYRWRKYGQK VKNSP+PRSYYRCT S+
Sbjct: 119 ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR 178

Query: 196 CGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILF 255
           C VKKRVERSS D SIVITTYEGQH HQ+   PRG I          +  HD        
Sbjct: 179 CTVKKRVERSSDDPSIVITTYEGQHCHQTIGFPRGGI----------LTAHD--PHSFTS 238

Query: 256 QHNIP---GQPFMYNPPQPFLTNESSFLSPRPPPPSLSPPLLSSRASLLQDNGLLQDLVP 315
            H++P     P+ Y      L  +++  SPR P P+      +   S   + GLL D+VP
Sbjct: 239 HHHLPPPLPNPYYYQELLHQLHRDNNAPSPRLPRPTTED---TPAVSTPSEEGLLGDIVP 285

[Close]

BLAST of CmaCh06G015710 vs. TAIR 10
Match: AT1G69310.2 (WRKY DNA-binding protein 57 )

HSP 1 Score: 152.1 bits (383), Expect = 7.4e-37
Identity = 109/244 (44.67%), Postives = 136/244 (55.74%), Query Frame = 0


Query: 76  DLLSTTVPPLQPPLSSPSSTVPESSEV--LNAPPTPNSSSVSNSSSNEAAPIEEVDKNAK 135
           DL  TT        SS SS+   S  V   N  P+  SSS  + + N  A  E+      
Sbjct: 59  DLTQTTGVKPTTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTP--PP 118

Query: 136 TSKVLKPKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQ 195
            + V + KK QK+ R+PRFAFMTKSD+D+L+DGYRWRKYGQK VKNSP+PRSYYRCT S+
Sbjct: 119 ETPVKEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR 178

Query: 196 CGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILF 255
           C VKKRVERSS D SIVITTYEGQH HQ+   PRG I          +  HD        
Sbjct: 179 CTVKKRVERSSDDPSIVITTYEGQHCHQTIGFPRGGI----------LTAHD--PHSFTS 238

Query: 256 QHNIP---GQPFMYNPPQPFLTNESSFLSPRPPPPSLSPPLLSSRASLLQDNGLLQDLVP 315
            H++P     P+ Y      L  +++  SPR P P+      +   S   + GLL D+VP
Sbjct: 239 HHHLPPPLPNPYYYQELLHQLHRDNNAPSPRLPRPTTED---TPAVSTPSEEGLLGDIVP 285

[Close]

BLAST of CmaCh06G015710 vs. TAIR 10
Match: AT4G18170.1 (WRKY DNA-binding protein 28 )

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-33
Identity = 96/204 (47.06%), Postives = 116/204 (56.86%), Query Frame = 0


Query: 61  GGIGFHDFYNPS--SIFDLLSTTVPPLQPPLSSPSSTVPESSEVLNAP------------ 120
           G +   + +NPS  S  D L ++    +  L       P SSEV N+             
Sbjct: 34  GNLPSQNGFNPSTYSFTDCLQSSPAAYESLLQKTFGLSPSSSEVFNSSIDQEPNRDVTND 93

Query: 121 --------PTPNSSSVSNSSSNEA-APIEEVDKNAK-----------TSKVLKPKKNQ-K 180
                    T    S SNSSS+EA  P E+  K+ +           + KV K KK + K
Sbjct: 94  VINGGACNETETRVSPSNSSSSEADHPGEDSGKSRRKRELVGEEDQISKKVGKTKKTEVK 153

Query: 181 KQREPRFAFMTKSDIDHLDDGYRWRKYGQKTVKNSPYPRSYYRCTTSQCGVKKRVERSSS 230
           KQREPR +FMTKS++DHL+DGYRWRKYGQK VKNSPYPRSYYRCTT +C VKKRVERS  
Sbjct: 154 KQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQ 213

The following BLAST results are available for this feature:

BLAST of CmaCh06G015710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGZ4	7.2e-45	43.48	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ...	[more]
O22900	1.6e-36	41.82	WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1	[more]
Q9C983	1.0e-35	44.67	Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 ...	[more]
Q8VWJ2	1.8e-32	47.06	WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1	[more]
Q93WV4	7.0e-32	52.20	WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1	[more]

BLAST of CmaCh06G015710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49520.1	5.1e-46	43.48	WRKY DNA-binding protein 48	[more]
AT2G47260.1	1.1e-37	41.82	WRKY DNA-binding protein 23	[more]
AT1G69310.1	7.4e-37	44.67	WRKY DNA-binding protein 57	[more]
AT1G69310.2	7.4e-37	44.67	WRKY DNA-binding protein 57	[more]
AT4G18170.1	1.3e-33	47.06	WRKY DNA-binding protein 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 163..222 e-value: 1.6E-37 score: 140.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 164..221 e-value: 1.5E-25 score: 89.2
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 158..223 score: 31.628332
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 148..224 e-value: 1.6E-33 score: 116.3
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 155..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..293
None	No IPR available	PANTHER	PTHR31221:SF238	WRKY TRANSCRIPTION FACTOR 48-RELATED	coord: 87..309
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 87..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015710.1	CmaCh06G015710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding