CmaCh06G015080 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGAAGCACAGAAAAATGGGTTTGAAATCAGTATTGTTTGTCTTGGTGATGGCTGCTGCCATGGGAGCTCCATTAATGGTGGCGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATCGGCGCCAATGGCACCGCCACTCCTATCTTTCCGAGTAAGTTATTTTCAAACTAATTAAGCTATGTTCAAATTGGTAAACTATTTATAAACACCATCGTATCGTAAACGTTTTCTATGCAGACGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACGAACAGCGCGGGAATGTTTTTGATTCTGTTAAATCCTTTACAGTTCCTTCTCTCTTCACTCACGTCCAACTGTAGCGTCCTAGTGAACACGCCACTGTCGAGCTGCAACGCGACATTACCCTCTGTCGGGAATTTGGTTTCGGGGTTGAATTTCGCCGGAACGATATTGCAGGGACTCCTCAGTATAACCAACATCATACCCAGGGGATTCACATTCCAGCCATCTACATAAAACTGCATATAACTTGTGTTTGTTGTGTTTGCTGCTGTCAAAAATAAACGTTGTCTGTGTCTGTGTTTGTGTCTGTGTTCGTGTTCGTGTTCGTGTAGCTGTTTCAAAGTGGGATTATTTGAGGATTTTAAGTAATTATATTTACTAATCCTTAAGCCCACATTTATGTGCTCTGATATAATATAAAGTTTGGTGTGATATTATGTGATCCTAAACTATATAAATACTTTCG TTTTGAAGCACAGAAAAATGGGTTTGAAATCAGTATTGTTTGTCTTGGTGATGGCTGCTGCCATGGGAGCTCCATTAATGGTGGCGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATCGGCGCCAATGGCACCGCCACTCCTATCTTTCCGAACGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACGAACAGCGCGGGAATGTTTTTGATTCTGTTAAATCCTTTACAGTTCCTTCTCTCTTCACTCACGTCCAACTGTAGCGTCCTAGTGAACACGCCACTGTCGAGCTGCAACGCGACATTACCCTCTGTCGGGAATTTGGTTTCGGGGTTGAATTTCGCCGGAACGATATTGCAGGGACTCCTCAGTATAACCAACATCATACCCAGGGGATTCACATTCCAGCCATCTACATAAAACTGCATATAACTTGTGTTTGTTGTGTTTGCTGCTGTCAAAAATAAACGTTGTCTGTGTCTGTGTTTGTGTCTGTGTTCGTGTTCGTGTTCGTGTAGCTGTTTCAAAGTGGGATTATTTGAGGATTTTAAGTAATTATATTTACTAATCCTTAAGCCCACATTTATGTGCTCTGATATAATATAAAGTTTGGTGTGATATTATGTGATCCTAAACTATATAAATACTTTCG ATGGGTTTGAAATCAGTATTGTTTGTCTTGGTGATGGCTGCTGCCATGGGAGCTCCATTAATGGTGGCGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCGATGGCAACATCGGCGCCAATGGCACCGCCACTCCTATCTTTCCGAACGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACGAACAGCGCGGGAATGTTTTTGATTCTGTTAAATCCTTTACAGTTCCTTCTCTCTTCACTCACGTCCAACTGTAGCGTCCTAGTGAACACGCCACTGTCGAGCTGCAACGCGACATTACCCTCTGTCGGGAATTTGGTTTCGGGGTTGAATTTCGCCGGAACGATATTGCAGGGACTCCTCAGTATAACCAACATCATACCCAGGGGATTCACATTCCAGCCATCTACATAA MGLKSVLFVLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPIFPNAAVQLQCGNGNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATLPSVGNLVSGLNFAGTILQGLLSITNIIPRGFTFQPST Homology
BLAST of CmaCh06G015080 vs. ExPASy Swiss-Prot
Match: Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16 Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 0
BLAST of CmaCh06G015080 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 6.8e-76 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CmaCh06G015080 vs. ExPASy TrEMBL
Match: A0A6J1FBV3 (phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of CmaCh06G015080 vs. ExPASy TrEMBL
Match: A0A6J1C7T1 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 8.4e-50 Identity = 109/151 (72.19%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of CmaCh06G015080 vs. ExPASy TrEMBL
Match: A0A5J5C4T7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000611 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47 Identity = 103/155 (66.45%), Postives = 125/155 (80.65%), Query Frame = 0
BLAST of CmaCh06G015080 vs. ExPASy TrEMBL
Match: A0A5B7BLH4 (Putative Pollen Ole e 1 allergen and extensin family protein OS=Davidia involucrata OX=16924 GN=Din_039271 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.3e-46 Identity = 103/155 (66.45%), Postives = 123/155 (79.35%), Query Frame = 0
BLAST of CmaCh06G015080 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima]) HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CmaCh06G015080 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64 Identity = 137/157 (87.26%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of CmaCh06G015080 vs. NCBI nr
Match: KAG6597529.1 (hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028986.1 hypothetical protein SDJN02_10169 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254.2 bits (648), Expect = 7.3e-64 Identity = 136/157 (86.62%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of CmaCh06G015080 vs. NCBI nr
Match: XP_022937971.1 (phylloplanin-like [Cucurbita moschata]) HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63 Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of CmaCh06G015080 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida]) HSP 1 Score: 217.2 bits (552), Expect = 9.8e-53 Identity = 114/156 (73.08%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of CmaCh06G015080 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 127.5 bits (319), Expect = 9.5e-30 Identity = 71/125 (56.80%), Postives = 90/125 (72.00%), Query Frame = 0
BLAST of CmaCh06G015080 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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