CmaCh06G014860 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G014860
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr06: 9458253 .. 9461082 (-)
RNA-Seq ExpressionCmaCh06G014860
SyntenyCmaCh06G014860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGAACCAGAAGAAGGGGAAAAGGGAAAGCAAAAGGTGAAAGCATTTTGTTACAAGATTCCACAAAGCTTTAAAGCAGGCAATTGTGGAAGTGGGGACAGCGACCACGATGAAATCACAACGTTGGTAGTGGTTGGATTTACTTATAAGAAGTGTAGTGCGACCTGATATAAGCCTTCAATCAATCATATGTCTCACTGTATCCTTCCGTCTCCCCTAAGTTACTAAATTTTTAAGTTTCAAATTGTCTTTTTTTCTTTATATTGTTGTTATTTGTCTACTTGCCTCGTACTCTGCAATTTATGAGTATATGTAAACTCAAAGTTACATCAACTACAAAATTAGGAGATAAATATTTTTAAAATTCCACTCAAATTCTTTGGTATTTAAGATCTGTAATCTATTTAAATTTGTATGTACTCCATAGATAATATTTAAAAAGAAGTGCTCATTAGTTTCAATAAATAAATAAATAAATAAATCAAAAAGTGCTTGGTTTTTATGATTGGAATGAAGAAGAGGCTAATTTGGTAACAGGGTTCCTCCAATTGGGACAAATAGAGAGTTGATAATTGCACAAAGACTAATAAAGAAAAATCCACTGAGATAGAAACATAAAAGAACCCAAAGAGGTGAAGTTTAAAAAAGTGTATTTCAAGTTTCAAGTTTGGGTCTAAAAAAGTTTTTGATCTTTTAAATTCAGTGTGTATTGATATGCATTAAATACACTGAAATTATGGAGTAAAAAGGGAAAATACGAAGTTTTAGAGCTACCTTTATTGTGTTTTCTTCCCAAATTCAAAGCCGTTAACTTCTAGTAGTATTTGTCTGATATCTGGAACATAACTCAATTGGTTAGACACATATATATTCAATAAAAAAAAGATAACTGTTTGTTCCCACTTAAGCTGGAAATTTTCTTCATGTCCGACTTGCGTTGGGGCATTTGATAGTACAATGTTAGAGGCTAGGAGGTCAGATCATTAGCAAAAGACTGGTGCTTGCAGTCCTTGAACATCCCCTGAAGATTCCTCACTCTCTGCTATCATACTACCAAAAATTAGTCATTTCATCGTACTCTTTGTCCATTCCTCCTTGGAATATTTTGGTATCATCTGTCTATTTTATTTTGGGGCTACACCTTTGTTGTTTTGCCTTTAGGTTTCATTCCGAAGATTCCATACCAGTTAAGTCGTCGTCCTTTACGTGGTCACTAATATGTGGTTCTGGTGGGTTACGAGAAATAAGTCCTTATTGGTTTGATTTTGGTTGCATTTCCGAACACTAGATGAGTAGAATGTAACTCTAGCTTGTTGTGAGTTATCGACTCAAGTAGTCATCGATGCACTTCTTGGCAATGAAATCTAAAGACTACATAGAGAGAGAGGGGAGAGAACTTGCCGTGTTCTCCCCCGAGAAAGAAACAGTTTCATTGATGCCCTTTTCCTGAAAAAAAAAAGCTACGACTGACAAGCTTTGAAGTTGCCAATCAGAGTATCTATCATAGATAAGTGGATAAGATACTAATGTAATATGTATGATAGTTCAATGTCCCACCATGCGAGAATTCGCAATCGTTGAACTCATGGAAGTTTTTGAGGTTTTGAAGATGCATGATTGAACACTATCTCGAACCTTCTCTTCTCCTCACTACCTATGATGTTTTATCAGGTAGCATTTCAGGTTCTGGCAAAAATATTCACCATGTGGACTCATTCGACGACCCTAAGGTTTTTTCACTGGAGCTCTTGTGTTGGTGCTCCATCATTCTAGTAAAATTTAACCGGTTATGGTGATGGTACAGGGCTATTTAGATGAAGGGGAAGCCATGAATTCTGAGCCTAACAAACAAAAGAAAAGGAACAAGAAGAGAATGAAAAGCCAAAGGTTGAAATTCCTAAATGGTTTTGTTTATGCTCTATATAGTTCTAGTGTTGCCTCTACTTCCTCATGATAAATCTGTTGTGCTGCAGACTGTTGAGGACTCCGAGTGTGGGGAAGAAGCCCAAAAAGAAGTTGAACTTATGAGCTGAAACAAGACATGGACCTTCCTAATAACTGCCAATAGTTCAGTCTTCTGAAGAATGGGGAATAACTTGAAAAAGGAATCGACAAGGCAGTTTTTAAGCCCTATAGGGTTGCTGTTCCTGGTATTTTGAACAAGGAAAACTATTAAATCTCAGATTCATGAGCCTAAAACACTTGATTGACTTGGTTTCACTTTGCGAAAAATCGCTGTTTAGCCTCCCTTTCTTATATTGCAACATTCTTTTGTTATGAAATTGCAACTTTCTTTAAATCCAATGGCTTGAATTCAATTGATGGTAAGAGAAGTTTTTTCCCTATACATTCATGGCTTCTATCGCTTATATGGCTCTTCAAGTCAGTGATTTGCTTCTAAGCGTTTACAACTAGCCTTGAACATAATTAATTTTCTACCAGCTTAGATATTCTAGACTTTTAGTTCAAAGGATTAATAATCCCCAAAGAAAATGAAGGTTATAGTCTCAAAATCTAACCCAAAATCATGAAGCTATAAGTAACTAAGCTACCCCTAAAGGAAAAGTACTTAAGCTGATTAAAAAGAGGAAGGAACAATACGACTAATGCAGAAGCAGGTAGAAGATTGATTTTCATTCAATGAAACTACAATTTGCTCAAACTACAAGGATTTATACATAATTCCAGTCTATGGTACAGTCAGACAAAGAAACTGATAGCCAAGGAGATACACATTTATAATTCAAAAAGTGAGGCCAAAATATTATATCTAAGACATATTTACTCACCTTTTCAATTTGTCTCAACACATGGGAAGCGGATTTGA

mRNA sequence

ATGCTAGAACCAGAAGAAGGGGAAAAGGGAAAGCAAAAGGTGAAAGCATTTTGTTACAAGATTCCACAAAGCTTTAAAGCAGGCAATTGTGGAAGTGGGGACAGCGACCACGATGAAATCACAACGTTGGTAGTGGTTGGATTTACTTATAAGAAGTGTAGTAGCATTTCAGGTTCTGGCAAAAATATTCACCATGTGGACTCATTCGACGACCCTAAGGGCTATTTAGATGAAGGGGAAGCCATGAATTCTGAGCCTAACAAACAAAAGAAAAGGAACAAGAAGAGAATGAAAAGCCAAAGACTGTTGAGGACTCCGAGATTTATACATAATTCCAGTCTATGGTACAGTCAGACAAAGAAACTGATAGCCAAGGAGATACACATTTATAATTCAAAAAGTGAGGCCAAAATATTATATCTAAGACATATTTACTCACCTTTTCAATTTGTCTCAACACATGGGAAGCGGATTTGA

Coding sequence (CDS)

ATGCTAGAACCAGAAGAAGGGGAAAAGGGAAAGCAAAAGGTGAAAGCATTTTGTTACAAGATTCCACAAAGCTTTAAAGCAGGCAATTGTGGAAGTGGGGACAGCGACCACGATGAAATCACAACGTTGGTAGTGGTTGGATTTACTTATAAGAAGTGTAGTAGCATTTCAGGTTCTGGCAAAAATATTCACCATGTGGACTCATTCGACGACCCTAAGGGCTATTTAGATGAAGGGGAAGCCATGAATTCTGAGCCTAACAAACAAAAGAAAAGGAACAAGAAGAGAATGAAAAGCCAAAGACTGTTGAGGACTCCGAGATTTATACATAATTCCAGTCTATGGTACAGTCAGACAAAGAAACTGATAGCCAAGGAGATACACATTTATAATTCAAAAAGTGAGGCCAAAATATTATATCTAAGACATATTTACTCACCTTTTCAATTTGTCTCAACACATGGGAAGCGGATTTGA

Protein sequence

MLEPEEGEKGKQKVKAFCYKIPQSFKAGNCGSGDSDHDEITTLVVVGFTYKKCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQRLLRTPRFIHNSSLWYSQTKKLIAKEIHIYNSKSEAKILYLRHIYSPFQFVSTHGKRI
Homology
[Close]
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match: A0A6J1IUT6 (uncharacterized protein LOC111479494 OS=Cucurbita maxima OX=3661 GN=LOC111479494 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 8.8e-07
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQRLLRTPR 108
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K+++  +  R
Sbjct: 79  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKKTKKNKR 134

[Close]
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match: A0A6J1GVW4 (uncharacterized protein LOC111457905 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457905 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQ 101
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K++
Sbjct: 80  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNK 128

[Close]
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match: A0A6J1GY51 (uncharacterized protein LOC111457905 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457905 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQ 101
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K++
Sbjct: 80  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNK 128

[Close]
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match: A0A0A0LAK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153160 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-06
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 54  SSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQRLLRTPRFIHNS 113
           +S+  SG NI HVD+FDDP+   DEGE+MNSEP KQKK+NKK+    +  +  + + +S
Sbjct: 82  ASVHSSGTNIRHVDTFDDPEASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDS 140

[Close]
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match: A0A1S3AY37 (uncharacterized protein LOC103483832 OS=Cucumis melo OX=3656 GN=LOC103483832 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-06
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 54  SSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQRLLRTPRFIHNS 113
           +S+  SG NI HVD+FDDP+   DEGE+MNSEP KQKK+NKK+    +  +  + + +S
Sbjct: 82  ASVHSSGTNIRHVDTFDDPEASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDS 140

[Close]
BLAST of CmaCh06G014860 vs. NCBI nr
Match: KAG6597510.1 (hypothetical protein SDJN03_10690, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38
Identity = 88/103 (85.44%), Postives = 90/103 (87.38%), Query Frame = 0 

Query: 5   EEGEKGKQKVKAFCYKIPQSFKAGNCGSGDSDHDEITTLVVVGFTYKKCSSISGSGKNIH 64
           EEG KGKQKV+AFCYKIPQSFKAGNCGSGDSDHDEITTLV           ISGSGKNIH
Sbjct: 69  EEGGKGKQKVRAFCYKIPQSFKAGNCGSGDSDHDEITTLVAFQV------GISGSGKNIH 128

Query: 65  HVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQ-RLLRTP 107
           HVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKS+ RLLRTP
Sbjct: 129 HVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSKSRLLRTP 165

[Close]
BLAST of CmaCh06G014860 vs. NCBI nr
Match: KAG7018625.1 (hypothetical protein SDJN02_20495 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 64.7 bits (156), Expect = 8.2e-07
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 36  DHDEITTLVVVGFTYKKCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKK 95
           DH   TT   + F+    S  SGSG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK
Sbjct: 117 DHKFTTTTNQLSFS----SLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKK 176

Query: 96  RMKSQ 101
             K++
Sbjct: 177 NKKNK 177

[Close]
BLAST of CmaCh06G014860 vs. NCBI nr
Match: XP_022979960.1 (uncharacterized protein LOC111479494 [Cucurbita maxima])

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-06
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQRLLRTPR 108
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K+++  +  R
Sbjct: 79  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKKTKKNKR 134

[Close]
BLAST of CmaCh06G014860 vs. NCBI nr
Match: XP_023527659.1 (uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-06
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQ 101
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K++
Sbjct: 80  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNK 128

[Close]
BLAST of CmaCh06G014860 vs. NCBI nr
Match: XP_022956118.1 (uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata])

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-06
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 52  KCSSISGSGKNIHHVDSFDDPKGYLDEGEAMNSEPNKQKKRNKKRMKSQ 101
           K S +S SG NI HVD+FDDP+   D+GEAMNSEP KQK +NKK  K++
Sbjct: 80  KASVLSSSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNK 128

The following BLAST results are available for this feature:
BLAST of CmaCh06G014860 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G014860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IUT68.8e-0755.36uncharacterized protein LOC111479494 OS=Cucurbita maxima OX=3661 GN=LOC111479494... [more]
A0A6J1GVW42.0e-0661.22uncharacterized protein LOC111457905 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GY512.0e-0661.22uncharacterized protein LOC111457905 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0LAK03.4e-0649.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153160 PE=4 SV=1[more]
A0A1S3AY373.4e-0649.15uncharacterized protein LOC103483832 OS=Cucumis melo OX=3656 GN=LOC103483832 PE=... [more]
BLAST of CmaCh06G014860 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6597510.15.3e-3885.44hypothetical protein SDJN03_10690, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7018625.18.2e-0753.85hypothetical protein SDJN02_20495 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022979960.11.8e-0655.36uncharacterized protein LOC111479494 [Cucurbita maxima][more]
XP_023527659.14.1e-0661.22uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022956118.14.1e-0661.22uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata][more]
BLAST of CmaCh06G014860 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G014860.1CmaCh06G014860.1mRNA