CmaCh06G014530 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G014530
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr06: 9292775 .. 9295633 (-)
RNA-Seq ExpressionCmaCh06G014530
SyntenyCmaCh06G014530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATCCTCACATCCCTCCTCGCGATTCATGACTAGATTCCCGCGATCGCACGCGTTCTTCGGCTGTTGAGGAACTGCAACCTCGACGACGTTCGACCACAGGGAATACGAAGCGTGCGGTGGCAGCCACTCCCTAGGGTACCTACACAGCGCAATGGCGGAAAACACAATGCAACGATGAGACTAGAATGACGAAGAAGAACCTATCAAAGAGGTTTGAACTTACCACAATGTTGATTACGACGATGAACCACCTCGACTGCGCCCGGGAGTGAAGCAGGCGAGCGGCGGGAATCGAAATGTCTTCACTCTATTTGTACCTGATTTGTAAACGTCTAAGAAACTCTCTGCAAGAAAAAAAAGGACATCCAATCTTCTCTTCGCCATCGTTTGCTGTCAAGACTCTTTACACTTGAAGCAATTATACATCGATTACAAGCATGTGGTAAGAAATTGCCTATTAATTTGCATAGAGGACTTCAATTCCTCCTATTCTTCATAATTTTTGTTTGGTTAATTTCTCTTGCACGCAATATATTATACCGATTCAGAACCTTTGGATTTCTTATGAAAATCGACTGTTATTTTCTGTCATAACAGCGCATTGTTCTGCCGGAGGAAACTTTCTTGAGGGAAATTCTTGGTGCCGTAGTTCTGGCTGAAGAAGGTCTGATTGAGCCAGCTCTTGAATCCAAGCCTGTAAAAATCTATGCGGATAGTGATGAATCTCAAGATGGCCAAACTGTCATCCATGAACCGAACAGCCTCCTTTGATCTATTTGCAAAGCAGGTAAGTGATAAGATACAATCTTGGTTTGTGGAATAAACAAACTGCAAAACCACGCCTGTCATTATTGCCATGGGTCATGTGTTTGCTGATATTCATCAAACTTTTGGGGCATTTGAATGAGAAAAGTGAGCATTTCGCTGATATTCATCAAACTTTTGGGGCATTTGAATGAGAAAAGTTAGCATTTCGTGGGTCATAGAAAGCAACAAAACTATAAATCTAGAACCAACCACCTACTGGTAACCGATATTGTCTGCCTAAAAAAGCATTTGTTAGGAAGAAATTTTCACACCTTTTTTAAAGAATGTTTTGTTCCCTCTCCAACTGAGGTGGGATCTCACAGTCCAACCCCTTGGGGTCCAGCATCATTGCGGCACACCACTCGATGTCTGATTTTGATACCATTGTAATAACCCAAGTCCACGCTAGTAGATATTGTCAACTTTGACCTGTTACGTATCGCCATCAACCTCACGGTTTTAAAACACGTCCACTAAGGAGAGGTTTCCACACCCTTGTAAGAAATGATTTGTTCCCCTCTCCAACCGATGTAGAATCTCACATATTGTCCGATGTCCGCCTACTTAGTCCATAGTTTGCATTACTTCATTCCAAATAGAGGGAAAGTCCAAGAAAACTCAAACTAGACCCAGAAATGTGATCAATATGTTTTGATTAGCAGAAAACAAAGGGAACAAAGACATGAAGAGAGTATTTGCCTCTTTGAAAGCTCCCAGAAATCTTCTAGGACTCCATACATAACAAATAGTTAAGCTCAAAGACACAGAAAAGTCGAAAATTCAGCTGTAGAAAGCAATGATGTTCTGAGGGAAAAGGGTAAAGGCTTTGAATTTGTACAAGCACAAGTGACAGTCAATTTGAGAACCTAAAGAAGAACAAGAGAAAGGAGACTCCACAAGAACAAATGAAAATCTTGGTTCATGGATTTTTTCAGGTTAAGACCCCAAGTCCATTGGAATGGATCCTCCAGCATTCAAAATCCGTTTTTCGAGCTGCAGTAAACAAAGTTTTGAGTCAATTTATCCATTTTTGTTCGAGAAACCAAACGGTGTAAAGATGAGATGACAAGAAGAAATGGCCTTAAGTATCAGAGAGCTCTACTACTCACTGCAAATAGGTAACTGAGCTTCTCTTTAACACAATAGAATTCTTGCTGTACTTGTTGCAGGCATCTTAAACACCTGCAGCAAACAACAGTTTACTGATTGAGAAGAACACTTTTGAAAGATCAATCAAATAGTGAAAATAACTCACCCTTCTGCACTCTGTTGCTCGCAGACATTCCGGAAGGCAATGCAGGCGTTTTTCACTCTAAGTGCACCTATGCTACATTGCCCACAGAGGAGTCGAAAACAACAAACACAACAACACAAGGTCAGCATTTTCTCCATGACTTTTAGATTTGATATGCATCATGAATATCCTATCTTGATTTCCATGGTTAAAAACGGTTTCAAATGATTGGTCTTGCACAACAGTCCATAAAGTCCTTTTGAGTCAAACGGTAACCAAGTTCACTGCTAGTAGATATTGTCTTCTTTGGATTTTTCCTTTCAGACTTCTCCCCAAGGTTTTTAAAACGCGTCCCCTAGAGAGGGGTTTCTACATCCTTATAAAGAATGTTTCTGTAACAGCTCAAGCCCATCGCTAGCAGATATTGTCCTCTTCGGACTTTTCCCTTCTGGGCTTCCTCTCAAGGTTTTAAAATGCGTCCAATAGGGAGAGGTTTCCAAGTCCTTATAAGGTATGCTTCGTTGGAACTCACAGTTTCCCTCCCCAACCCCCCAACCGATATGAGATCTCACAATAACATATGGGAGTGAGAGATTCGACTCTTTAACCTCTTATTCAAGGACGGTGTATTTTCAAATTGGCAGGCAAAAATGTTCTTCAAATTGTAAAAAGATGGAAGAGAAAACTCACAAAAGTTGTTCTTATCAGGTGTATCCATTCATAGGGAGAGAGAAGGAAAATAGAGTACCTGGAGCTGCTGCCCTTAAGCTGGTGCACATGATCATCAATCTTTTTGAAGTCCACACTTGGCTGTGA

mRNA sequence

CAATCCTCACATCCCTCCTCGCGATTCATGACTAGATTCCCGCGATCGCACGCGTTCTTCGGCTGTTGAGGAACTGCAACCTCGACGACGTTCGACCACAGGGAATACGAAGCGTGCGGTGGCAGCCACTCCCTAGGGTACCTACACAGCGCAATGGCGGAAAACACAATGCAACGATGAGACTAGAATGACGAAGAAGAACCTATCAAAGAGGTTTGAACTTACCACAATGTTGATTACGACGATGAACCACCTCGACTGCGCCCGGGAGTGAAGCAGGCGAGCGGCGGGAATCGAAATGTCTTCACTCTATTTGTACCTGATTTGTAAACGTCTAAGAAACTCTCTGCAAGAAAAAAAAGGACATCCAATCTTCTCTTCGCCATCGTTTGCTGTCAAGACTCTTTACACTTGAAGCAATTATACATCGATTACAAGCATGTGCGCATTGTTCTGCCGGAGGAAACTTTCTTGAGGGAAATTCTTGGTGCCGTAGTTCTGGCTGAAGAAGGTCTGATTGAGCCAGCTCTTGAATCCAAGCCTGTAAAAATCTATGCGGATAGTGATGAATCTCAAGATGGCCAAACTGTCATCCATGAACCGAACAGCCTCCTTTGATCTATTTGCAAAGCAGGTTAAGACCCCAAGTCCATTGGAATGGATCCTCCAGCATTCAAAATCCGTTTTTCGAGCTGCAGTAAACAAAACATTCCGGAAGGCAATGCAGGCGTTTTTCACTCTAAGTGCACCTATGCTACATTGCCCACAGAGGAGTCGAAAACAACAAACACAACAACACAAGGTGTATCCATTCATAGGGAGAGAGAAGGAAAATAGAGTACCTGGAGCTGCTGCCCTTAAGCTGGTGCACATGATCATCAATCTTTTTGAAGTCCACACTTGGCTGTGA

Coding sequence (CDS)

ATGCGGATAGTGATGAATCTCAAGATGGCCAAACTGTCATCCATGAACCGAACAGCCTCCTTTGATCTATTTGCAAAGCAGGTTAAGACCCCAAGTCCATTGGAATGGATCCTCCAGCATTCAAAATCCGTTTTTCGAGCTGCAGTAAACAAAACATTCCGGAAGGCAATGCAGGCGTTTTTCACTCTAAGTGCACCTATGCTACATTGCCCACAGAGGAGTCGAAAACAACAAACACAACAACACAAGGTGTATCCATTCATAGGGAGAGAGAAGGAAAATAGAGTACCTGGAGCTGCTGCCCTTAAGCTGGTGCACATGATCATCAATCTTTTTGAAGTCCACACTTGGCTGTGA

Protein sequence

MRIVMNLKMAKLSSMNRTASFDLFAKQVKTPSPLEWILQHSKSVFRAAVNKTFRKAMQAFFTLSAPMLHCPQRSRKQQTQQHKVYPFIGREKENRVPGAAALKLVHMIINLFEVHTWL
Homology
[Close]
BLAST of CmaCh06G014530 vs. NCBI nr
Match: KAG7018655.1 (Sugar transporter ERD6-like 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-10
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 27   QVKTPSPLEWILQHSKSVFRAAVNKTFRKAMQAFFTLSAPMLHCPQRSRKQQTQQHKVYP 86
            Q + PSP  WI QHSKSV  AA NK  RK+MQAFFTLSAPMLHC QRS  Q  +Q+KV  
Sbjct: 1313 QFRNPSPRGWIHQHSKSVAPAAENKALRKSMQAFFTLSAPMLHCTQRS--QNNKQNKVSI 1371

Query: 87   F 88
            F
Sbjct: 1373 F 1371

The following BLAST results are available for this feature:
BLAST of CmaCh06G014530 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G014530 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh06G014530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7018655.15.9e-1065.57Sugar transporter ERD6-like 16, partial [Cucurbita argyrosperma subsp. argyrospe... [more]
BLAST of CmaCh06G014530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G014530.1CmaCh06G014530.1mRNA