CmaCh06G013240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G013240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB14-like
Location	Cma_Chr06: 8730598 .. 8731988 (-)
RNA-Seq Expression	CmaCh06G013240
Synteny	CmaCh06G013240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAACAGAGCAACGATTCTGCCATTGTTGAACCCAAATCCAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATCTTCTTCCCTCGATCATTCATCAGTGACTGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGTTGGCGGGGTTTGGGCAGAGGAGGCGTCGACTGGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGACTCTATGGAATTTGGGTGTTATTACGACAATAGCTCTAGCATGAACGATAGTATGGAGTTTTGGTACAGCGTGTTCGTTAAAGCTGGTGGGTCGCTAAATGACCCTGCATTTTAATTTTACAGAACCGCCGCAGTCCAAAAATGGCGTGAACTGTAAATTAGATAAGGATTTAAGGGTATATTAGGAAACGAAAATATGTCTTTTGCCAACTATTGCGCATTAGTCTACGGTCAATGACTCGTAATAGGATAATTTTAGGGTTTTTTTAATTACAAATTATAAAAAGGGATAATTCGGGTGTTAATATTATAAAATGTAATAAATAAATAAATAAAATAAATTTAACTTTTCCATTTTTCTATTATATTTTAAAATTTAGATAACAAAAATGAGAAAGGCATAAATAGAAAATTTTAATTTTTTTTAAAAATTATTTGGAAAAAAAAAAAAACAAAAGTATTACAGGTTGGACCTAAATTTAAAAATATTTGAAAACATATTATATAATTTATACCGTATTTATATTCGGAGCATTATTTGAAATAATGGTCAGAAATCTTTCATAAAAGTTTATATTGTTGGATGATGAAAGTCCCACATTATACTCTCTATTTTATACTCTCTCTCCCGCCACTCGCCAGGTTTCCCTCCGTTTTTGTTACCGACCCGGTTCCCTCCCCCGTCGGGCTGTGTTCCACTTTCGGTCCCTCCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGTACTTTTTTCGATTCCAATCTCTGCGACGTCTGCAAAATTGTTGAACGATTATGTTTCAAATCGAGGTCGATCAGTTTCGTTGCGTATTGATTTTAGAGGATTGTCGATAATGGACTGTTTAGGTTAATCCTTCATAATTGGTTTGATTGTCATAATCAAATAAGCTTCTAAGGTTAGTTTATATGCCGATCGGATTGTAAGCCATAGTCAAATTCAAGAAGCTTTCACATTTTCATGCGTGAATTCTCTTGGAAGATTAAGTTTCTGTGTATTGTTTAGCTATATCTATTTCCACGGCTATATCACTGATCTTCTGTCTTATTTGGTTAGGGTTCACAATAA

mRNA sequence

ATGAAGAAACAGAGCAACGATTCTGCCATTGTTGAACCCAAATCCAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATCTTCTTCCCTCGATCATTCATCAGTGACTGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGTTGGCGGGGTTTGGGCAGAGGAGGCGTCGACTGGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGACTCTATGGAATTTGGGTGTTATTACGACAATAGCTCTAGCATGAACGATAGTATGGAGTTTTGGTTTCCCTCCGTTTTTGTTACCGACCCGGTTCCCTCCCCCGTCGGGCTGTGTTCCACTTTCGGTCCCTCCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGGTTCACAATAA

Coding sequence (CDS)

ATGAAGAAACAGAGCAACGATTCTGCCATTGTTGAACCCAAATCCAAACCACCCCAGAAGCTGAATTCCTCTAACCAATACGAATTTCCATCTTCTTCCCTCGATCATTCATCAGTGACTGATTCTCCAGCCGCCGTGTGGGGCGGCTGCAACGAAATCGAGAAGGAACAACGCATTGAAATCTTTGAGGCATTTCATCAAACAGTTGGCGGGGTTTGGGCAGAGGAGGCGTCGACTGGGCCAATGTTCAAGTCGTCGGCGTTCAATGATGAAGAACAGGTTCAGTCGCTGTTCAGAGCCATGGACTCTATGGAATTTGGGTGTTATTACGACAATAGCTCTAGCATGAACGATAGTATGGAGTTTTGGTTTCCCTCCGTTTTTGTTACCGACCCGGTTCCCTCCCCCGTCGGGCTGTGTTCCACTTTCGGTCCCTCCCGTTCGTTCTTCTCCATCTTTCAATTTCAGGGTTCACAATAA

Protein sequence

MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSMEFWFPSVFVTDPVPSPVGLCSTFGPSRSFFSIFQFQGSQ

Homology

[Close]

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL
Match: A0A6J1IAK6 (transcription factor MYB14-like OS=Cucurbita maxima OX=3661 GN=LOC111473219 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 74  MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 133

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM
Sbjct: 134 IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 193

Query: 121 EFWFPSVFV 130
           EFW+ SVFV
Sbjct: 194 EFWY-SVFV 201

[Close]

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL
Match: A0A6J1G239 (transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449971 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 121/129 (93.80%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFP SSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 117 MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 176

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQT GG  AEEAST PMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDN SSMND M
Sbjct: 177 IFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMNDGM 236

Query: 121 EFWFPSVFV 130
           EFWF SVFV
Sbjct: 237 EFWF-SVFV 244

[Close]

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL
Match: A0A0S2I8B4 (Myb-related transcription factor OS=Citrullus lanatus OX=3654 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36
Identity = 86/130 (66.15%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 4   QSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIEIFE 63
           +   SAIVEPK K PQ+L+ SN YEFPS SLD S  TDSP  VW G NEIEKEQ +EIFE
Sbjct: 125 EKKKSAIVEPKFK-PQELDFSNHYEFPSYSLDPSPFTDSPTGVWDGYNEIEKEQHVEIFE 184

Query: 64  AFHQTVGGVWAEEAST----GPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDS 123
           AFHQT GG W EE ST    GP+F SSA NDEEQ+Q  FR MDS+EFGCYY+N   M+DS
Sbjct: 185 AFHQTCGGHWPEEPSTANFNGPVFNSSAVNDEEQIQPAFRDMDSVEFGCYYNNGDKMDDS 244

Query: 124 MEFWFPSVFV 130
           MEFW+  VFV
Sbjct: 245 MEFWY-RVFV 252

[Close]

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL
Match: A0A6J1DF45 (transcription factor MYB30-like OS=Momordica charantia OX=3673 GN=LOC111019490 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31
Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 2   KKQSNDSAIVEPKSKPPQKLNSS--NQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRI 61
           +++ +DSA++  K K PQKL+ S    +E PSSSLD SS+TDSP A W G NEI  +Q I
Sbjct: 125 ERKKSDSAVITGKPK-PQKLDCSTYTYHELPSSSLDLSSLTDSPTAAWDGYNEIGNKQYI 184

Query: 62  EIFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDS 121
           E+ EAFHQT GG+W EE   GP+F SSA NDE+Q+QS FR +DSMEFGCYY+N + M+DS
Sbjct: 185 EVSEAFHQTGGGLWPEEPFDGPIFNSSAANDEKQLQSPFRDVDSMEFGCYYNNDTKMDDS 244

Query: 122 MEFWFPSVFV 130
           MEFW+  VFV
Sbjct: 245 MEFWY-RVFV 252

[Close]

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL
Match: A0A1S3AW89 (myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103483593 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.3e-29
Identity = 82/136 (60.29%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 2   KKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIEI 61
           KK+S DSA+ EPKSK PQKL+ SN YE PS SLDHS  TDSP     G   IE EQ +EI
Sbjct: 127 KKKSADSAVFEPKSK-PQKLDCSNHYEIPSFSLDHSPFTDSPT----GYKVIENEQDVEI 186

Query: 62  FEAFHQT-VGGVWAE------EASTGPMFKSSAFND-EEQVQSLFRAMDSMEFGCYYDNS 121
           FEAFHQT  GG W E      E   G +F SSA ND EEQ+Q  +RAMDS+EFGCYY+NS
Sbjct: 187 FEAFHQTCTGGHWPEDHQPLTENFHGSLFNSSAINDNEEQIQPPYRAMDSVEFGCYYNNS 246

Query: 122 SSMNDSMEFWFPSVFV 130
           + M+D+MEFW+  VFV
Sbjct: 247 TKMDDNMEFWY-RVFV 256

[Close]

BLAST of CmaCh06G013240 vs. NCBI nr
Match: XP_022974552.1 (transcription factor MYB14-like [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 74  MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 133

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM
Sbjct: 134 IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 193

Query: 121 EFWFPSVFV 130
           EFW+ SVFV
Sbjct: 194 EFWY-SVFV 201

[Close]

BLAST of CmaCh06G013240 vs. NCBI nr
Match: XP_023539408.1 (transcription factor MYB30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 123/129 (95.35%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 117 MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 176

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQT GGVWAEEAS GPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDN SSMND M
Sbjct: 177 IFEAFHQTGGGVWAEEASNGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMNDGM 236

Query: 121 EFWFPSVFV 130
           EFW+ SVFV
Sbjct: 237 EFWY-SVFV 244

[Close]

BLAST of CmaCh06G013240 vs. NCBI nr
Match: XP_022945854.1 (transcription factor MYB30-like [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-58
Identity = 121/129 (93.80%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFP SSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 117 MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 176

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQT GG  AEEAST PMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDN SSMND M
Sbjct: 177 IFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNGSSMNDGM 236

Query: 121 EFWFPSVFV 130
           EFWF SVFV
Sbjct: 237 EFWF-SVFV 244

[Close]

BLAST of CmaCh06G013240 vs. NCBI nr
Match: KAG6597365.1 (Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.2 bits (596), Expect = 7.9e-58
Identity = 120/129 (93.02%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFP SSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 117 MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 176

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQT GG  AEEAST PMFKSSAFNDEEQVQSLFRAMDSMEFGCYY+N SSMND M
Sbjct: 177 IFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYNNGSSMNDGM 236

Query: 121 EFWFPSVFV 130
           EFWF SVFV
Sbjct: 237 EFWF-SVFV 244

[Close]

BLAST of CmaCh06G013240 vs. NCBI nr
Match: KAG7028829.1 (Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.2 bits (596), Expect = 7.9e-58
Identity = 120/129 (93.02%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPSSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 60
           MKKQSNDSAIVEPKSKPPQKLNSSNQYEFP SSLDHSSVTDSPAAVWGGCNEIEKEQRIE
Sbjct: 35  MKKQSNDSAIVEPKSKPPQKLNSSNQYEFPCSSLDHSSVTDSPAAVWGGCNEIEKEQRIE 94

Query: 61  IFEAFHQTVGGVWAEEASTGPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYDNSSSMNDSM 120
           IFEAFHQT GG  AEEAST PMFKSSAFNDEEQVQSLFRAMDSMEFGCYY+N SSMND M
Sbjct: 95  IFEAFHQTGGGHGAEEASTRPMFKSSAFNDEEQVQSLFRAMDSMEFGCYYNNGSSMNDGM 154

Query: 121 EFWFPSVFV 130
           EFWF SVFV
Sbjct: 155 EFWF-SVFV 162

The following BLAST results are available for this feature:

BLAST of CmaCh06G013240 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G013240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAK6	6.1e-64	98.45	transcription factor MYB14-like OS=Cucurbita maxima OX=3661 GN=LOC111473219 PE=4...	[more]
A0A6J1G239	1.0e-58	93.80	transcription factor MYB30-like OS=Cucurbita moschata OX=3662 GN=LOC111449971 PE...	[more]
A0A0S2I8B4	1.4e-36	66.15	Myb-related transcription factor OS=Citrullus lanatus OX=3654 PE=4 SV=1	[more]
A0A6J1DF45	3.0e-31	59.23	transcription factor MYB30-like OS=Momordica charantia OX=3673 GN=LOC111019490 P...	[more]
A0A1S3AW89	8.3e-29	60.29	myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103483593 PE=4 SV=1	[more]

BLAST of CmaCh06G013240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974552.1	1.3e-63	98.45	transcription factor MYB14-like [Cucurbita maxima]	[more]
XP_023539408.1	2.6e-61	95.35	transcription factor MYB30-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945854.1	2.1e-58	93.80	transcription factor MYB30-like [Cucurbita moschata]	[more]
KAG6597365.1	7.9e-58	93.02	Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028829.1	7.9e-58	93.02	Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh06G013240 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013240.1	CmaCh06G013240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress