CmaCh06G013130 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G013130
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCRIB domain-containing protein RIC7-like
LocationCma_Chr06: 8678011 .. 8679676 (-)
RNA-Seq ExpressionCmaCh06G013130
SyntenyCmaCh06G013130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACCTCTGTCAAGGGCAACTCTGTAAAGGGCCTCTTAAAAGGACTAAGATACATTTCACAGATTTTCGGTATGTTTTCGATTTCGTTATCGTTTTTGTTTTCGTTCGAAAATTTTTGCCCTGGATCGGGACTTGATTGATTGATTTGATGGAAATTTGCAGATGAAAAGGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTTGCTCATATTGGATGGGATGGTCCATCTGGTAATCAAAATAATCCTGGCTGGGTAAGAACAATCAAAGGATGGAATCTCACCCTTTTCTGATTTTATGTTGTGTTTTTAAAGTTTTGTGAACGTCGATTTGGATTTTGTGGGTGTTGGGAAATTGCACAGATGAACGAGTTCAAATCTTCGCCACAAAGCCAAGACTCGGGGGATTTGGTGAATTCTAGTGGGGAACTCCCCAGCAAAGGTTTGCTTCATCTTCTTCTACTTTTATCTGAAAATTTTAATTCGTTTACTCATAGAATGTTAAGGTTTAAATGGCACTCTAGTTTATGAATATGTATTCGTTTCTTCTTTGGGTGAATCATTCAACCTGCGATAAATATAAAGCTAATAAGTTTAATCATGTGCATTGATAAATGATTCAACATTTACATAGCTCATCATGTCAAAATGGAAATTCAGGACTGTTTACATTCAAGTCATGAATATAGATGTTGTTTGATTTGTTATATTTTGATTGCTTAGTCTTGGTGGCTGAGATTTGGCTTAGAATGCTGGTAGATTGTTGTATCTTTTAGAGTTTCTGAGGATGGTGAAGTGATGTTGGTAATGGAAGTTATGTTTGTATAGAGTCTGGAGAGATAGATGTGCAAAAGGCAAATCGATCTCGAAAGTCGAAATCGCAAACATCATCAGAAACGTCTTTAGACTCTTCTTCTGCTCGGCGACATTCTGAGAAAGGTTCTAGGCGACAACGCTCATCATGCCCTTCAGGCGAATCTGTTGCAGAAGGTAGTAATCGAAGCTCACGACGTCATCGTAGTTCGAATCAAGGGGGTTCATCAAGCTCAGAAAATCCTGCCCCAAAACACTCACATCGGAGGAAATCTAAGGGGTCATCTGACGGGGGTGAATCAACAAAATCCTCTAGATCAAGGGAGAATAACTCTTTAACAGACATACCAAGCCCAGTGTTGGAAGCAGTTGATGAAGAACAGGGGTGAGCGGAAATTCCAGACATGGAACTAAACGGCATTCTAGTCGAGCTGGGTGCTTCAGATGGATTCTCCTTGCCCGTATATGAACATAATTTTGTTGCCTTGGAGATGATATGAATCATATGACTTTAGCTTCAGTCATCAGTTAAAATTTTATCACCAAGAAAGTTGTATGTGTAAACATGTAACCAACAGTCATTCTTCAAACGATGACCCACACGTAATCTGAAGCTTGAATTTATATATTCAGCGCCCCTTTTCAATGCAGTGGTATGATCCTCATAAATCACTGATTGACAGAACCATTGTAGTCACAAATAACAGCACTTAGAGCTTATTGTTGCACTGTCAAGTATTCGTGTTGCATTTGGAACATTTCATTTCTCGGGTAATACGAATCTCTTATATCACCTAGAAAATTCTCCGACTGTCTCCGTTAAACCACTGTTCCATCC

mRNA sequence

ATGGGCACCTCTGTCAAGGGCAACTCTGTAAAGGGCCTCTTAAAAGGACTAAGATACATTTCACAGATTTTCGATGAAAAGGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTTGCTCATATTGGATGGGATGGTCCATCTGGTAATCAAAATAATCCTGGCTGGATGAACGAGTTCAAATCTTCGCCACAAAGCCAAGACTCGGGGGATTTGGTGAATTCTAGTGGGGAACTCCCCAGCAAAGAGTCTGGAGAGATAGATGTGCAAAAGGCAAATCGATCTCGAAAGTCGAAATCGCAAACATCATCAGAAACGTCTTTAGACTCTTCTTCTGCTCGGCGACATTCTGAGAAAGGTTCTAGGCGACAACGCTCATCATGCCCTTCAGGCGAATCTGTTGCAGAAGGTAGTAATCGAAGCTCACGACGTCATCGTAGTTCGAATCAAGGGGGTTCATCAAGCTCAGAAAATCCTGCCCCAAAACACTCACATCGGAGGAAATCTAAGGGGTCATCTGACGGGGGTGAATCAACAAAATCCTCTAGATCAAGGGAGAATAACTCTTTAACAGACATACCAAGCCCAGTGTTGGAAGCAGTTGATGAAGAACAGGGGTGAGCGGAAATTCCAGACATGGAACTAAACGGCATTCTAGTCGAGCTGGGTGCTTCAGATGGATTCTCCTTGCCCGTATATGAACATAATTTTGTTGCCTTGGAGATGATATGAATCATATGACTTTAGCTTCAGTCATCAGTTAAAATTTTATCACCAAGAAAGTTGTATGTGTAAACATGTAACCAACAGTCATTCTTCAAACGATGACCCACACGTAATCTGAAGCTTGAATTTATATATTCAGCGCCCCTTTTCAATGCAGTGGTATGATCCTCATAAATCACTGATTGACAGAACCATTGTAGTCACAAATAACAGCACTTAGAGCTTATTGTTGCACTGTCAAGTATTCGTGTTGCATTTGGAACATTTCATTTCTCGGGTAATACGAATCTCTTATATCACCTAGAAAATTCTCCGACTGTCTCCGTTAAACCACTGTTCCATCC

Coding sequence (CDS)

ATGGGCACCTCTGTCAAGGGCAACTCTGTAAAGGGCCTCTTAAAAGGACTAAGATACATTTCACAGATTTTCGATGAAAAGGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTTGCTCATATTGGATGGGATGGTCCATCTGGTAATCAAAATAATCCTGGCTGGATGAACGAGTTCAAATCTTCGCCACAAAGCCAAGACTCGGGGGATTTGGTGAATTCTAGTGGGGAACTCCCCAGCAAAGAGTCTGGAGAGATAGATGTGCAAAAGGCAAATCGATCTCGAAAGTCGAAATCGCAAACATCATCAGAAACGTCTTTAGACTCTTCTTCTGCTCGGCGACATTCTGAGAAAGGTTCTAGGCGACAACGCTCATCATGCCCTTCAGGCGAATCTGTTGCAGAAGGTAGTAATCGAAGCTCACGACGTCATCGTAGTTCGAATCAAGGGGGTTCATCAAGCTCAGAAAATCCTGCCCCAAAACACTCACATCGGAGGAAATCTAAGGGGTCATCTGACGGGGGTGAATCAACAAAATCCTCTAGATCAAGGGAGAATAACTCTTTAACAGACATACCAAGCCCAGTGTTGGAAGCAGTTGATGAAGAACAGGGGTGA

Protein sequence

MGTSVKGNSVKGLLKGLRYISQIFDEKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSPQSQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRHSEKGSRRQRSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPAPKHSHRRKSKGSSDGGESTKSSRSRENNSLTDIPSPVLEAVDEEQG
Homology
BLAST of CmaCh06G013130 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-19
Identity = 89/206 (43.20%), Postives = 119/206 (57.77%), Query Frame = 0

Query: 1   MGTSVKGNSVKGLLKGLRYISQIF---DEKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNP 60
           M   +    +K LLKGLRYISQ+F    EKE+EMQIG PTDVKHVAHIGWDGPS N   P
Sbjct: 1   MQLGMSSTKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAP 60

Query: 61  GWMNEFKSSPQSQDSGDL--VNSSGELPSKESGEI-DVQKANRS-RKSKSQTSSETSLDS 120
            WMN+FKSSP  +    L   +SS +  S+  G   D+ K  +S RKS S+  S T   S
Sbjct: 61  SWMNDFKSSPVMESIQGLGEDDSSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERS 120

Query: 121 -SSARRHSEKGSRRQRSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPAPKHSHRRKS 180
             + RR S KG+    SS  + +  +  S+R + +   S+    S+     PK S R+KS
Sbjct: 121 DKTKRRTSNKGT---SSSRRTKDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 180

Query: 181 KGSSDGGESTKSSRSRENNSLTDIPS 199
           K + +GG S++SSR  E + ++D  S
Sbjct: 181 KEAGNGG-SSRSSRISEADYMSDTGS 202

BLAST of CmaCh06G013130 vs. ExPASy Swiss-Prot
Match: F4J424 (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-15
Identity = 78/197 (39.59%), Postives = 103/197 (52.28%), Query Frame = 0

Query: 10  VKGLLKGLRYISQIF-DEKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSPQ 69
           +KGLLKGLRYI++IF DEKE EMQIG+PTDVKHVAHIGW+GPS     P WM++FK  P 
Sbjct: 5   MKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSA--TTPSWMHDFK--PT 64

Query: 70  SQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRHSEKGSRRQR 129
            Q   +   +S + P   SGE      +R  + K+ T + +  +S S    S + S+R  
Sbjct: 65  DQTKTETKGTSNKKPG-SSGE-----KHRKGRRKTSTGNNSPTESPSRVGGSVRPSKR-- 124

Query: 130 SSCPSGESVAEGSNRSSRRHRSSNQGGSSSS--ENP-------APKHSHRRKSKGSSDGG 189
                        N   +R +++  G  S S  E P        PK S ++KSKGS+ GG
Sbjct: 125 -------------NTGKQREQNTGSGSESGSGLELPQQTDQFVVPKQSKQKKSKGSATGG 176

Query: 190 ESTKSSRSRENNSLTDI 197
                S    N   TDI
Sbjct: 185 GEPPPSNEPSNKKETDI 176

BLAST of CmaCh06G013130 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.5e-14
Identity = 75/208 (36.06%), Postives = 111/208 (53.37%), Query Frame = 0

Query: 1   MGTSVKGNSVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGW 60
           M  ++  + +K LLKGLRYISQ+F+ EKE+E+QIG PTDVKHVAHIGWDGPS N   P W
Sbjct: 1   MQLTMSSSKMKSLLKGLRYISQVFESEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSW 60

Query: 61  MNEFKSSPQSQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRH 120
           M EF             NS G   S E    D        +   ++    +L  S+ +  
Sbjct: 61  MTEF-------------NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLPNLPKSTRKAA 120

Query: 121 SEKGS--RRQRSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPA-----PKHSHRRK- 180
           SEKGS  + + S      S  +G++ SSRR + + +     S  P+     PK S R+K 
Sbjct: 121 SEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKKK 180

Query: 181 -SKGSSDGGESTKSSRSRENNSLTDIPS 199
            +K ++  G S++S+R  + +++++  S
Sbjct: 181 STKETAVNGGSSRSTRRSDVDNMSEYMS 195

BLAST of CmaCh06G013130 vs. ExPASy Swiss-Prot
Match: F4I5N6 (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.7e-13
Identity = 85/221 (38.46%), Postives = 121/221 (54.75%), Query Frame = 0

Query: 9   SVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSP 68
           +VKGLLKGLRYI+QIFD EK+++MQIG PTDVKHVAHIG DGP+   N P WM +FK  P
Sbjct: 3   TVKGLLKGLRYITQIFDEEKDKDMQIGFPTDVKHVAHIGSDGPA--TNVPSWMGDFK--P 62

Query: 69  QSQDSGDLVNSSGELPSKESGE-IDVQK----ANRSRKSKSQTSSET-SLDSSSARRHSE 128
           Q  ++G +V S  +  + + GE + +Q+     ++ +  K++  SET S + S  RR+S 
Sbjct: 63  QENENGQVV-SRADANNNQIGEGVGLQELLPPTDKPKHKKTRRKSETVSQNGSPPRRNSS 122

Query: 129 --------KGSRRQRSSCPSGESVAEGSNRSSRRHR------SSNQGG---SSSSENPAP 188
                   K +RR   S     S+   ++ S RR R      +  +G    S SS +   
Sbjct: 123 ASASDMQPKNTRRHHRS--RHGSIDSSNDPSVRRRRVVSVTTNDMEGSYPLSDSSTHSRK 182

Query: 189 KHSHRRKSKGSSDGGESTKSSRSRENNSLTDIPSPVLEAVD 206
             S  RK KGS  G  S K ++ +  N       P++E+VD
Sbjct: 183 STSRHRKPKGSGGGELSMKKTKGKTEN-------PIVESVD 209

BLAST of CmaCh06G013130 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 73/199 (36.68%), Postives = 102/199 (51.26%), Query Frame = 0

Query: 9   SVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSP 68
           ++KGLLKGLRYI+QIFD EKEQEMQIG PTDVKHVAHIG DGP+     P WMN+FK+  
Sbjct: 4   TMKGLLKGLRYITQIFDEEKEQEMQIGFPTDVKHVAHIGSDGPT--NTTPSWMNDFKT-- 63

Query: 69  QSQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRHSEKGSRRQ 128
           Q  + G +V+                K N    ++     +  L S++  +  +K  R+ 
Sbjct: 64  QEHEKGQVVSRGNS-----------NKYNPQGTNQRGAGLKELLPSNTNEKPKQKTRRK- 123

Query: 129 RSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPAPKHSHRRKSKGSSDGGESTKSSRS 188
               P G   A   N +    R S+ G ++SS+ P+    H R + GS+D     + S  
Sbjct: 124 ----PGG---AASPNHNGSPPRKSS-GNAASSDEPSKHSRHNRSAHGSTDSSNDQEPSVR 175

Query: 189 RENNSLTDIPSPVLEAVDE 207
           R       IP+P  E  ++
Sbjct: 184 RRRGG---IPAPDTEVPNQ 175

BLAST of CmaCh06G013130 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-20
Identity = 89/206 (43.20%), Postives = 119/206 (57.77%), Query Frame = 0

Query: 1   MGTSVKGNSVKGLLKGLRYISQIF---DEKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNP 60
           M   +    +K LLKGLRYISQ+F    EKE+EMQIG PTDVKHVAHIGWDGPS N   P
Sbjct: 1   MQLGMSSTKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAP 60

Query: 61  GWMNEFKSSPQSQDSGDL--VNSSGELPSKESGEI-DVQKANRS-RKSKSQTSSETSLDS 120
            WMN+FKSSP  +    L   +SS +  S+  G   D+ K  +S RKS S+  S T   S
Sbjct: 61  SWMNDFKSSPVMESIQGLGEDDSSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERS 120

Query: 121 -SSARRHSEKGSRRQRSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPAPKHSHRRKS 180
             + RR S KG+    SS  + +  +  S+R + +   S+    S+     PK S R+KS
Sbjct: 121 DKTKRRTSNKGT---SSSRRTKDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 180

Query: 181 KGSSDGGESTKSSRSRENNSLTDIPS 199
           K + +GG S++SSR  E + ++D  S
Sbjct: 181 KEAGNGG-SSRSSRISEADYMSDTGS 202

BLAST of CmaCh06G013130 vs. TAIR 10
Match: AT3G23380.1 (ROP-interactive CRIB motif-containing protein 5 )

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-16
Identity = 78/197 (39.59%), Postives = 103/197 (52.28%), Query Frame = 0

Query: 10  VKGLLKGLRYISQIF-DEKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSPQ 69
           +KGLLKGLRYI++IF DEKE EMQIG+PTDVKHVAHIGW+GPS     P WM++FK  P 
Sbjct: 5   MKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSA--TTPSWMHDFK--PT 64

Query: 70  SQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRHSEKGSRRQR 129
            Q   +   +S + P   SGE      +R  + K+ T + +  +S S    S + S+R  
Sbjct: 65  DQTKTETKGTSNKKPG-SSGE-----KHRKGRRKTSTGNNSPTESPSRVGGSVRPSKR-- 124

Query: 130 SSCPSGESVAEGSNRSSRRHRSSNQGGSSSS--ENP-------APKHSHRRKSKGSSDGG 189
                        N   +R +++  G  S S  E P        PK S ++KSKGS+ GG
Sbjct: 125 -------------NTGKQREQNTGSGSESGSGLELPQQTDQFVVPKQSKQKKSKGSATGG 176

Query: 190 ESTKSSRSRENNSLTDI 197
                S    N   TDI
Sbjct: 185 GEPPPSNEPSNKKETDI 176

BLAST of CmaCh06G013130 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 )

HSP 1 Score: 78.6 bits (192), Expect = 6.8e-15
Identity = 75/208 (36.06%), Postives = 111/208 (53.37%), Query Frame = 0

Query: 1   MGTSVKGNSVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGW 60
           M  ++  + +K LLKGLRYISQ+F+ EKE+E+QIG PTDVKHVAHIGWDGPS N   P W
Sbjct: 1   MQLTMSSSKMKSLLKGLRYISQVFESEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSW 60

Query: 61  MNEFKSSPQSQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRH 120
           M EF             NS G   S E    D        +   ++    +L  S+ +  
Sbjct: 61  MTEF-------------NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLPNLPKSTRKAA 120

Query: 121 SEKGS--RRQRSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPA-----PKHSHRRK- 180
           SEKGS  + + S      S  +G++ SSRR + + +     S  P+     PK S R+K 
Sbjct: 121 SEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKKK 180

Query: 181 -SKGSSDGGESTKSSRSRENNSLTDIPS 199
            +K ++  G S++S+R  + +++++  S
Sbjct: 181 STKETAVNGGSSRSTRRSDVDNMSEYMS 195

BLAST of CmaCh06G013130 vs. TAIR 10
Match: AT1G04450.1 (ROP-interactive CRIB motif-containing protein 3 )

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-14
Identity = 85/221 (38.46%), Postives = 121/221 (54.75%), Query Frame = 0

Query: 9   SVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSP 68
           +VKGLLKGLRYI+QIFD EK+++MQIG PTDVKHVAHIG DGP+   N P WM +FK  P
Sbjct: 3   TVKGLLKGLRYITQIFDEEKDKDMQIGFPTDVKHVAHIGSDGPA--TNVPSWMGDFK--P 62

Query: 69  QSQDSGDLVNSSGELPSKESGE-IDVQK----ANRSRKSKSQTSSET-SLDSSSARRHSE 128
           Q  ++G +V S  +  + + GE + +Q+     ++ +  K++  SET S + S  RR+S 
Sbjct: 63  QENENGQVV-SRADANNNQIGEGVGLQELLPPTDKPKHKKTRRKSETVSQNGSPPRRNSS 122

Query: 129 --------KGSRRQRSSCPSGESVAEGSNRSSRRHR------SSNQGG---SSSSENPAP 188
                   K +RR   S     S+   ++ S RR R      +  +G    S SS +   
Sbjct: 123 ASASDMQPKNTRRHHRS--RHGSIDSSNDPSVRRRRVVSVTTNDMEGSYPLSDSSTHSRK 182

Query: 189 KHSHRRKSKGSSDGGESTKSSRSRENNSLTDIPSPVLEAVD 206
             S  RK KGS  G  S K ++ +  N       P++E+VD
Sbjct: 183 STSRHRKPKGSGGGELSMKKTKGKTEN-------PIVESVD 209

BLAST of CmaCh06G013130 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 )

HSP 1 Score: 74.7 bits (182), Expect = 9.8e-14
Identity = 73/199 (36.68%), Postives = 102/199 (51.26%), Query Frame = 0

Query: 9   SVKGLLKGLRYISQIFD-EKEQEMQIGLPTDVKHVAHIGWDGPSGNQNNPGWMNEFKSSP 68
           ++KGLLKGLRYI+QIFD EKEQEMQIG PTDVKHVAHIG DGP+     P WMN+FK+  
Sbjct: 4   TMKGLLKGLRYITQIFDEEKEQEMQIGFPTDVKHVAHIGSDGPT--NTTPSWMNDFKT-- 63

Query: 69  QSQDSGDLVNSSGELPSKESGEIDVQKANRSRKSKSQTSSETSLDSSSARRHSEKGSRRQ 128
           Q  + G +V+                K N    ++     +  L S++  +  +K  R+ 
Sbjct: 64  QEHEKGQVVSRGNS-----------NKYNPQGTNQRGAGLKELLPSNTNEKPKQKTRRK- 123

Query: 129 RSSCPSGESVAEGSNRSSRRHRSSNQGGSSSSENPAPKHSHRRKSKGSSDGGESTKSSRS 188
               P G   A   N +    R S+ G ++SS+ P+    H R + GS+D     + S  
Sbjct: 124 ----PGG---AASPNHNGSPPRKSS-GNAASSDEPSKHSRHNRSAHGSTDSSNDQEPSVR 175

Query: 189 RENNSLTDIPSPVLEAVDE 207
           R       IP+P  E  ++
Sbjct: 184 RRRGG---IPAPDTEVPNQ 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q1G3K85.8e-1943.20CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1... [more]
F4J4243.0e-1539.59CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1... [more]
Q1PF359.5e-1436.06CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1... [more]
F4I5N64.7e-1338.46CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1... [more]
F4IVV01.4e-1236.68CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1... [more]
Match NameE-valueIdentityDescription
AT4G28556.14.1e-2043.20PAK-box/P21-Rho-binding family protein [more]
AT3G23380.12.1e-1639.59ROP-interactive CRIB motif-containing protein 5 [more]
AT2G20430.16.8e-1536.06ROP-interactive CRIB motif-containing protein 6 [more]
AT1G04450.13.4e-1438.46ROP-interactive CRIB motif-containing protein 3 [more]
AT2G33460.19.8e-1436.68ROP-interactive CRIB motif-containing protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000095CRIB domainSMARTSM00285PBD_5coord: 33..66
e-value: 1.4E-4
score: 31.2
IPR000095CRIB domainPFAMPF00786PBDcoord: 32..66
e-value: 4.4E-11
score: 43.0
IPR000095CRIB domainPROSITEPS50108CRIBcoord: 33..46
score: 8.731263
IPR036936CRIB domain superfamilyGENE3D3.90.810.10CRIB domaincoord: 26..73
e-value: 2.3E-6
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..197
NoneNo IPR availablePANTHERPTHR46325:SF29CRIB DOMAIN-CONTAINING PROTEIN RIC5-LIKEcoord: 9..206
NoneNo IPR availableCDDcd00132CRIBcoord: 31..66
e-value: 1.99152E-8
score: 47.0481
IPR044510CRIB domain-containing protein RIC1-likePANTHERPTHR46325CRIB DOMAIN-CONTAINING PROTEIN RIC8coord: 9..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G013130.1CmaCh06G013130.1mRNA