CmaCh06G013060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G013060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	multiple organellar RNA editing factor 2, chloroplastic-like
Location	Cma_Chr06: 8637860 .. 8639725 (+)
RNA-Seq Expression	CmaCh06G013060
Synteny	CmaCh06G013060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGGTACTTGGAAGGATATAATGTTTTTTTTCTTCTTAATTTGGTTGCGTGTTTTCGCTGATTTCGGCTGTGTTTTGTGATTTCAACAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGTATGTGTTATGATCTTTAAATTTCTTCATGTGCCCTAACATACAGACCGTCGTTTCCTTTCTCGCACTCTAGTAATTTATGTTGCATTTGCACTTATCATATTGAAATTGTGAAGCTTGTACCAATGATTTTTGTTTGAATCTTTGCGAACAGGCTTGCCTGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAGGACTATGGGGGTAAGCATATGATGCTTTAAATGTTTTGTTTTTTGCTGTTCATTAAAAACCCAATCAAAGAATTCTTGACAGACAATGACATTCATATCTAGGAGGTTCATCTTGGCAAAGTTGCTTTCAATAAGTTGTTTTCTTTACAGATGAAACATGATCTATGTTTATATCATTCCTAGATTTGCATTCTGGCCAACCATCTTTGATATTATGTTCACATTTTATAAATATGCTCATGATAGCTTAAGAAATGCGTGAAACATGATTTTGGACTTAAATAAGATAAGCTATGATAGAGTCCATCTTGGCAAAGCTAAATCAGCCTTTTAGCAATGTTTAGTTTTGAATGCTAATGGACTCATAACAAATGTCACTCTGAACTGTTCTGAGCTTTGTATGTATAGTTGAGTTTCGGATCAGTAGAGATGAAACATTAGCTTTGCTTATTTGTTAAATTCATTAGTCCATCTTGGCAAACCTAAATTAGTCCTTCAGACAATGTTTAGTTTTGAATGCTAATGGACTTACAACAAATGTCTCTCGAAACTGTTCTGTGCTCTTTTTACCTTGTGGAGATGCAGATCAGTAGAGATGAAACATTAATGCATTTTATAACGTTTCAAAGTCTATCTTTGCAATGCCTGATTTTGAGTCCTGATAAGTTATGCCAATTTACATCAGTTTACAGATTGAAAGAAAAAAAGAGTGTTCTTACATCAGTTTACAGATTGAATGCGTGTATAGTAAATCTTGGCAAACCTAAATTAGTCTTTCAGACAATGTTTAGATTTGAATGCTAAATTAGACTCTCGAAACTGTTCTGTTCTCTTTATACTTTGTGGAGATGCAGATCAGTAGAGATGAAACATCAAGACTTGCTTATTATGTTTTGTAGTCTGTCTTTGCAATATACTTTTCCGTGTGAAATAAAAAGGGTTTTTTTGTGGTGGTCGCAGCTGAGTTGTTCGTGAATGGTGAAATAGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTAAGGCGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTGAGAATATGTGCATATGATGAGTAGAAAGACGGGGGAAGACAAAATTGGAAAATTGTTTTGTCTGTAATCTCCATTACATGTAATAGATCAGAATCATGGCGTGTTTAGGAGGTGGTAATTTTTGTTGTTGACTTGTTGCCTTTGGTGAACATGGAC

mRNA sequence

ATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAACCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGCTTGCCTGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAGGACTATGGGGCTGAGTTGTTCGTGAATGGTGAAATAGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTAAGGCGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTGAGAATATGTGCATATGATGAGTAGAAAGACGGGGGAAGACAAAATTGGAAAATTGTTTTGTCTGTAATCTCCATTACATGTAATAGATCAGAATCATGGCGTGTTTAGGAGGTGGTAATTTTTGTTGTTGACTTGTTGCCTTTGGTGAACATGGAC

Coding sequence (CDS)

ATGGCGCCACTTTTCCCTGGCTGTGACTATGAGCATTGGCTCATCGTGATGGACAAGCCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAACCTGGTGGTGAGGGTGCCTCTAAGCAACAGATGATTGACTGCTACGTTCAGACCCTCGCTAAAGTTCTTGGCAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCCAATAAGCTTGAGGGCTTGCCTGGTGTTCTCTTTGTTCTTCCTGATTCTTACGTCGACCCTGAGTATAAGGACTATGGGGCTGAGTTGTTCGTGAATGGTGAAATAGTTCAAAGGTCACCAGAGAGACAGAAAAGGGTGGAGCCACAGCCTCAAAGAGCTCAAGATAGACCGAGGTATAATGATCGGACCCGGTATGTAAGGCGCAGAGAAAACATGAGGTGA

Protein sequence

MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR

Homology

[Close]

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.9e-72
Identity = 135/166 (81.33%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVMD                     KPGGEGA+KQQMIDCY+QTLA
Sbjct: 75  MAPLFPGCDYEHWLIVMD---------------------KPGGEGATKQQMIDCYIQTLA 134

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           KV+GSEEEAKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGA
Sbjct: 135 KVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGA 194

Query: 121 ELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 195 ELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.9e-65
Identity = 125/167 (74.85%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVMD                     KPGGE A+KQQMIDCYVQTLA
Sbjct: 84  MAPLFPGCDYEHWLIVMD---------------------KPGGENATKQQMIDCYVQTLA 143

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           K++GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGA
Sbjct: 144 KIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGA 203

Query: 121 ELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGEIVQR PERQ++ +E   QR  D+P+Y+D+TRYVRRRENMR
Sbjct: 204 ELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-64
Identity = 124/167 (74.25%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVM+                     KPGGE A KQQMIDCYVQTLA
Sbjct: 87  MAPLFPGCDYEHWLIVME---------------------KPGGENAQKQQMIDCYVQTLA 146

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           K++GSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+KDYGA
Sbjct: 147 KIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGA 206

Query: 121 ELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGE+V R PERQ+R VE   QR  D+P+Y+DR R VRRRENMR
Sbjct: 207 ELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-28
Identity = 77/165 (46.67%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 4   LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLAKVL 63
           L  GCDYEHWLIVM+                  T  KP     ++++MI+ YV+TL  VL
Sbjct: 88  LLDGCDYEHWLIVME-----------------FTDPKP-----TEEEMINSYVKTLTSVL 147

Query: 64  GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF 123
           G EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+D   KDYG +L+
Sbjct: 148 GCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLY 207

Query: 124 VNGEIVQRSPER---QKRVEPQPQRAQDRPRYNDR--TRYVRRRE 164
           V G+++ R   R   Q+   P+P     RPRY+ R  T  V RRE
Sbjct: 208 VEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-28
Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 4   LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLAKVL 63
           + PGCDY HWLIVM+                      P     +++QMID Y+ TLA VL
Sbjct: 80  MLPGCDYNHWLIVME---------------------FPKDPAPTREQMIDTYLNTLATVL 139

Query: 64  GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF 123
           GS EEAKK +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D + KDYG + +
Sbjct: 140 GSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 199

Query: 124 VNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 164
           VNGEI+   P +    +P+  R+    +Y  +  YVR+R+
Sbjct: 200 VNGEII---PCQYPTYQPKQSRSS---KYKSKA-YVRQRD 211

[Close]

BLAST of CmaCh06G013060 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 271.2 bits (692), Expect = 5.6e-73
Identity = 135/166 (81.33%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVMD                     KPGGEGA+KQQMIDCY+QTLA
Sbjct: 75  MAPLFPGCDYEHWLIVMD---------------------KPGGEGATKQQMIDCYIQTLA 134

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           KV+GSEEEAKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGA
Sbjct: 135 KVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGA 194

Query: 121 ELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 195 ELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of CmaCh06G013060 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-66
Identity = 125/167 (74.85%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVMD                     KPGGE A+KQQMIDCYVQTLA
Sbjct: 84  MAPLFPGCDYEHWLIVMD---------------------KPGGENATKQQMIDCYVQTLA 143

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           K++GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+LPDSYVD E KDYGA
Sbjct: 144 KIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGA 203

Query: 121 ELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGEIVQR PERQ++ +E   QR  D+P+Y+D+TRYVRRRENMR
Sbjct: 204 ELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRRENMR 229

[Close]

BLAST of CmaCh06G013060 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-65
Identity = 124/167 (74.25%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLA 60
           MAPLFPGCDYEHWLIVM+                     KPGGE A KQQMIDCYVQTLA
Sbjct: 87  MAPLFPGCDYEHWLIVME---------------------KPGGENAQKQQMIDCYVQTLA 146

Query: 61  KVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 120
           K++GSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+KDYGA
Sbjct: 147 KIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGA 206

Query: 121 ELFVNGEIVQRSPERQKR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 167
           ELFVNGE+V R PERQ+R VE   QR  D+P+Y+DR R VRRRENMR
Sbjct: 207 ELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of CmaCh06G013060 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 125.9 bits (315), Expect = 2.9e-29
Identity = 77/165 (46.67%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 4   LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLAKVL 63
           L  GCDYEHWLIVM+                  T  KP     ++++MI+ YV+TL  VL
Sbjct: 88  LLDGCDYEHWLIVME-----------------FTDPKP-----TEEEMINSYVKTLTSVL 147

Query: 64  GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF 123
           G EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+D   KDYG +L+
Sbjct: 148 GCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLY 207

Query: 124 VNGEIVQRSPER---QKRVEPQPQRAQDRPRYNDR--TRYVRRRE 164
           V G+++ R   R   Q+   P+P     RPRY+ R  T  V RRE
Sbjct: 208 VEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of CmaCh06G013060 vs. TAIR 10
Match: AT1G11430.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-29
Identity = 71/160 (44.38%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 4   LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKPGGEGASKQQMIDCYVQTLAKVL 63
           + PGCDY HWLIVM+                      P     S+ QMID Y+ TLA VL
Sbjct: 81  MLPGCDYNHWLIVME---------------------FPKDPAPSRDQMIDTYLNTLATVL 140

Query: 64  GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF 123
           GS EEAKK +Y  S   Y GF C IDEETS K +GLPGVL+VLPDSY+D + KDYG + +
Sbjct: 141 GSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 200

Query: 124 VNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRE 164
           +NGEI+   P      +P   + ++  +Y  + RY R+R+
Sbjct: 201 INGEII---PCTYPTYQP---KQRNNTKYQSK-RYERKRD 212

The following BLAST results are available for this feature:

BLAST of CmaCh06G013060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22793	7.9e-72	81.33	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9C7Y2	1.9e-65	74.85	Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido...	[more]
O82169	3.6e-64	74.25	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84JZ6	4.1e-28	46.67	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q38732	7.0e-28	43.75	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]

BLAST of CmaCh06G013060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33430.1	5.6e-73	81.33	differentiation and greening-like 1	[more]
AT1G32580.1	1.3e-66	74.85	plastid developmental protein DAG, putative	[more]
AT2G35240.1	2.5e-65	74.25	plastid developmental protein DAG, putative	[more]
AT3G06790.2	2.9e-29	46.67	plastid developmental protein DAG, putative	[more]
AT1G11430.1	6.5e-29	44.38	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 10..112 e-value: 2.0E-6 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..166
None	No IPR available	PANTHER	PTHR31346:SF15	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2 CHLOROPLASTIC	coord: 2..40 coord: 40..166
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 2..40 coord: 40..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013060.1	CmaCh06G013060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion