CmaCh06G012740 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G012740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Dirigent protein
Location	Cma_Chr06: 8481326 .. 8490644 (-)
RNA-Seq Expression	CmaCh06G012740
Synteny	CmaCh06G012740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATGTCTTTTATGAAGGGTAATCTTGCTTTTCTGTTCTTGTATGATGTTTGGGTAAGAACAATGTGATAGAGAATATGAAAGGAAGTGGTGAAAGTTTCTGTTCACTGCCACGGGGAAAATCATGAGCCCGACAAAGCTGTTCCTTCCTCTGCAAAGGGAGGTGAGTTCTTGTTGATTGGGAAAAGACTTTGTTCTTTAGAATTTGGTGAGAGAGCTTCCGAATTCATGTGACAATATCTTCTCATTATGGCAGCTTCTTTGATTTTTCCTCAGAGAATTGTTTATCAAATCAATTATCTTCTCAATCAAGAAAGTTGTTACTTGAAGATAATAGAAAAGAGAGGTCTCAAAGGTAATGAGCTGTCAGGGCAAAACGTCAAAAGAATAGGCCAAAAGTGGTAAGAAAATAAAGTATGCCATTGTGAAACGTTGTACTTGTAACTTGTGAAATACTACACTTTATTATTAAATTTTTTGTTTAGTGACATCTCGAGCGTTTCGGATTTTATCATTTTCATTAGTAACCTTTTGACAATTTAGACTTGTTTTATTGATATATTCAAAATTAGATTGGTTTGGACTTTGCATTAACGATATCTTGTTTGCTCTTCTTCTCACTAGAAGACTGCCTGCACCATTACTTTGTTGCTTTCTTCCTTGTCCTTTTAAGGAGCGTTTGATATGGGCTGTAGATTTATATGAGTTGTGTGACATTAGAGTAGGGGAAGCAAAAGTGAGTTTCTTAACTTTACCATAAGCATTCTTCTCTGTTCTCTTAGCACCAGAAAACATTCTCATCATTGTTCCTGGTTCTTTGTCTGTCCTCTAATGATTGAGATTGAGATTGAGGGAGAATAAGTAGCTATCTATCTGTTTGACACTGCAGAATGAGCCAAGGGGGTGAAGGTAGAGGAGTACATACCGGACAAGGAAACTCTGAATTTGTTTCTTGGGGAACTCCAAATGCTGATTATGCTAGTGAAAAGAAGAAGTCCTTGCGAGTTCGCTACGTATACGCCGTTATCTTCCTGTTGACGAATCTCATTGCTTGGTTTATTCGAGATTATGGGAAAAGGATTATACCTCAGCTACGTTGTAAGGAAAATCTCTCTTTCATTTGTTCATTCATTTTGATTTACATTCACTACATCATTACAATAACTGAAAAGAAGATATTGAAGTTTACAAGTTTGTGTAAGTTTTGATTCAGAAGTATGTGTACATGTGGGATCCCACGTTGGTTGGGGAAGAGAACGAAACATTCTTTCTAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGCTTTAAAAACCTTAAGGGGAACCTCGAAAGGGAAAGCCCAAAGAGGACCATATCTGTTAGCAGTGAGTTTGGACTGATACAAATGGTATTAGAGACAGACACCGAGTGGCGTGCTAGCGAGGATGCTCGGTCTTGAAGGAGGGTATTGTGAGATCCCACATTGATTGGAGAGAGGAACGAGTGTCAGTGAGGACATTGGGCCCTAAAAGAGGTGGATTGTAAGATCCCATATCGGTTGGGGAGGAGATCGAAACATTCTTTATAAGGGTATAGAAACCTTTCCCTAGCATACATGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCTAAAGAGGACAATATCTGTACATGTCATTCAGAAACTTCACTTTCGTGCATTTTCCAGTAAACTATACTAGTATATTTCGGCTCGAAGATTAAGATCCTCGGCTTATATGTGATTTTTCTTTTTGGTAACTGAATGTCCCTGCAGATCTTAAATCCTGTGGAGCAGGAGGACAAGATTGTTTTCTCACACTCGGAGTTCTTCGTGTGAGCTTAGGATGCTTTGTATCTTTTTTATTCTCTTTTCTATCATATAAGAATAAGAATATTTCTTCTGCTCTTCTCTTGAGGTGGCTCTGTTTTTCATAAGATAGGAAGAGGCGAGATAGTCTTTCTATAACAGCCCAAGCCCACTGCTCGCAAATATTATCTTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACACGTAAGCTAGTGAGAGGTTTTCACACCCTTATAAAGGGTGTTTCGTTCCCCTCCCCAACTTCGATGCCCAGCGTCTTTGCTGGCACATCGCCTCGTGTCTACTCCCTTCGAGACTCAGCCTCCTCGCTGGCACACCGCTCAGTGCCTGGCTCTGATACCATTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTAAGGGGAAGCCTGAAATGGAAAGCCCAAAAATGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACACTTTCCTTTGCAATCAGTTCCTTAATATTGTTACATTGTTAACTATGACAATAGAGTTGAGTTGTCTTTTACAATATCATCAGCCAACGTTTAAATTTTTCCAAACCATGTCTGTTGGAATCCACAAAAGTCAGGCAGTTGTTACGATCTCAAATTGAAAACTGAGCCAAACTGTTCCTCACCATTGTATCATTGAAGGGCCAAATCCTTTACTACAAGTTCAGATATTTTTCTTTCTGATGTTTCTCTCTACGTCCAGAACAAGAAAATTACACGAACCTCGAAATGTCTGGCATTCTAGTTGGTGGAGCTTGAAGTTCTTTGTGTTTATTGTTTCAATGTTGGTTCCATTCTTCTTCCCTCCAGCTCTTATCCAATTATATGGTATGTTCCGTTTGTTCAACATCCATTACCTGGGTTGCTATCTCAACATTTACTGAAAACATGAACTGAATAATGATTCCATTGCTTAAATGAAATTACCTAGATTTCCCCCTCCTTTTTTGCAGGTGAAGTTGCTCGTGTAGGTGCAGGGTAAGTCCAAATTCTACATCTACAAAGCTAAATCTCTCAAGCATCTTTTGGAATAAGCCCATCGCTAGCAGATATTGTCCTCTTTGGGTTTCCCTTTCGGGCTTTCCCTCAAGGTTAAATCGTTCGCGTCTGCTAGGGAGAAGTTTCCACACTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTCAGGGCCTAGCGTTCTCGCTGGCACTTGTTCCCATCTCCAATCGATGTGGGACTCCCCAATCCACCCCCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGCCCCAGCACCCTTGTTGGTATACTGCCTCGTGTCCACCCCCCTTCGGGGCTCGACCTCTTCGCTGGCCGATCGTCCGGTGTTTGACTCTGATACCATTTGTCCAAGCCCACTGCTAGCGGATATTGTCTTCTTTGGGTTTTCCCTTCCGTGCTTCCCCTCAAAGTTTTTAAAACATGTCTACTAGAGAGAAGTTTCCACACCCTTATAAAGAATGTTTCGTTCTTCTCCCCAACCGACGTGAGATCTGACATCTCCATCTTTGTTTTCTCACATTATACGTCTGGCATTTGAGAACGGCCGTATGTTCATATAATGTTCTAATATAAATCATTCTCAAAGTTTCATACTAATACTGACTATATTTCTTTCATCCTCACTCCCATAGCTTAAGATGAACTTGTTAATTCTATCTGTATTATTTCTTATTGAAAATATGAGTGCCTTTAGTTTTCTTCTCATGAACAGGATATTTCTCCTCCTCCAACTGGTAAGTGTTATCCAGTTTATCTCATGGTGGAACAAGTACTGGATGCCTGATGAAAAAATGAAGCAGATGTATGTTCTCTAATAAAGTACAGAAATTCAAAAACCTTGAATTTACCTATGTTTAGCATCAATTTCCACAATATTTCATTCATATTCAACAGCTGCTCGCTTGGATTATTCACGTCGACGATCTTTTACATAGCTTCATTCTGCGGGATCGGTTTGATGTACTCCTTATATGTTCCAAAACTGAGATGTGTTCTCAATATATTCTTCATTTCTTGGACTTTGATTCTCCTCATTGTGATGATGGTTGTGTCTTTACATTCAAAGGTATGCTTTTCAAAATCACCCTTTTTGTTCACACCACAAAATTTTACTCATATTCAGCTAGATTATCACAGCTATGGGAAGTTTTTATTTGAAACTATCTTTGGAACTTTAAAACTCAGGTCAATAGAGGTCTGTTATCGTCCGGTATCATGGCTTCGTATGTCGTCTTCCTCTGCTGGTCTGCCATTAGAAGGTTTGGGATTCAACATTGTGTTGTGATATAGGCTTTCTGCTTTGAAGTTGTATGATGAACATGGAACTGGTTTACTATACTTCTAATCCTAGCGAGTTTCTTGACAGCGAACCGGCGACCGAGAAATGCAGTGCACAGAAGCAAGAGAGTGGGAATAGTGACTGGATTACTATACTTGTGAGAATTTACAGCTCTTTTTCACTTTTCTAGCTTCCCCTGTTCAAACTTTGAGGAACACCCTGCTCCTTTATTTGACCTCTCTAGCTGATGTTTGTGCGTTTCCTTGGTGTTGTGGTTGTAGAGCTTCTTAATTGCTATCTGTGCAGTTGTCATGGCAACCTTCTCAACTGGTATTGATTCACAATCATTTCAGGTCGCTTTTGACTTTCCATCCTCAAGTGTTTGTCTAAAAGTTTTATTAGAACGTACAATAGAAAGTTATGGTTTCGCTTGGTAACAATTTTGTTTTGAGGTGGGTAGATATTCTTTTATAATTTATGAGTGATCATAAATGATTATCGATTAACCAATGTTATTCATGTCGAACCCTCCGATTTACGGATATATCAATATATCGACGAATATGTTCGTCCTCGATAACTTTTTTGGTACTACTAATGTGAGATCTCACATCAGTTGGAGAGGAGAACGAAACATTCTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACATGGTATAAAACCGTAAGGCTACGGCGATACGTATCGAGCTAAAGCGGACAATATTTGCTAGCGATGAGCTTGAGTTTGGGTTGTTACAAATGCTATTAGAGCCAGACACCGAGCGATATGTCAGCGATGACGCTAGGTCCCCAAGGGGAGTGAATTATGAGATACCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTTATAAGGGTGTGGAAACCTCTCCCTCGCAAACGCGTTATAAAATCGTGAGGCCTGACAGCGATACGTAACAGGCTAAAGCGGACAATATCTGTTAGTGCTAGACTTGGGCTTGGATTGTTACAAATGGTATTAGAGTCAAATACCAAGCGATGTGCCAGCGAGGACGCTGGGTCCCCATGATGGATGGTTTATGAGATCCCACATCGGTTGGAGAGGAGAACAAAACATTACTTATAAGGGTGTAAAAACTTATTCCTAACAAACGCGTTTTAAAACCGTGAGACTGACAATGATACGTAATGAGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGTTTGGGCTATTACAAATGGTATCAAAGCCAGACACTGAGCGGTGAGCCAGCGAGAACGTTGGGTCCCCAAGGGGAGTGGATCGTGAGATCCCACATCGATTGGAAAGGAAAACGAAACATTCCTTATAAGGATGTGAAACCCTCCTCTTAACATACGCATTTTAAAACCGTGAGGTTGACGGCGATACATAACGAGCCAAGTGAACCATATTTACTAGCAGTGGGCTTGAGATATTACAACTAAAGATCTGCTTTGTTCGAATTAGAATGCATTTTTTCTAGAAATTTGAGCATAAAACAGCAGAATGACAACTAATGTGAGTTTCTGGTCCGTCGCAGTTTCGTAAAGACAAGGCGAAAGAGGAAGATGACATCCCTTACAAGTATGGTTTTTTCCATATCATATTCTCTCTGGGAGCCATGTACTTTGCAATGCTCTTCATCAGCTGGAACCTCAACAACTCAGCCACAAAGTAAGAAAACTCAAACCAACATTGTTGTTCCTCAAACTCATATATGAGATCTTACTTACGTTGATTAGAGATTGGAACGAAACATTTTTTATAAGGGTGTGGAAACCTTTCCTTAGTAGACACGTTTTAAAATTGTAAGGCTGATAGCAATATGTCGGTCAAAGCGGACACGATATGCTATGGTGGACTTGAGTTGTTACAAGTGTTATCAGAGCCAGACACTGGATGGTGTACCAGCGAGGCCGCTGGGCTCCAAGGGGAGTGGATTATGAGATCCCACATCGGTTGGGGAAGGGAACGAAACATTTCTTATAATGGTGTGGAAACCTCCCCTAGTAGATAGATTCTAAAATCGTGAGACTGACGGTAATATGTAACGAGCCAAAGTGGACAATATCTACTAGCGGTGGATTTGGGTTGTTACATCATCTCTCTCTAATATTGGAGTGCAAATTAAAACCTGAACAAGTATAAACCAAACCATCCAAACCAAGATCAAACTATGATTATTCGATCAACCGGTTTCGTTTTAAGATTCTCAAAGTTGAAAATGCTTAGTTTGATTTGGCTGGTGTGTGAGAATTGTTATATTTGATTTCGTTTTTAAAGTTAGTCAATTAGATCGAACCGGATCGAACTGAACCATTTACGCCCGTAACTCTCTCGTGATCTATGTGATTCTCATGATCGCTCTTATACAATTGTGAAATGTTTAGGTGGAGCATGGATGTTGGATGGACAAGTACATGGGTTAAAATCATTAATGAATGGCTTGCAGCCTCAATATACTGTAAGTACAGTCCTTTTCCAAACACACTCTACTGTGGCAATTGGTTGATAGACAGTATAGTATTATAGGTCTAGGAATTGGCTTAACAGCTATGATTAGTAAAAAACCACTCACGGTCGATATCTAGAGATGTTCACGGGATGGAATAGGGATGGACAAGACTTTTCCATCCACATCCCCGTTGCCTATTTCAATTTCTATGCTCGTAAAATTCTTCCTTTATTGTTGCAAGGATTAAATTCATACCAGAAGTTTTTTTCCTTTTTTGTTTCTATTAGAAAATATTCTAAGAAAAACAATAATTAAAATTCAAAATTATCAACACATTTTTCAATGACTCCATCTCATTCAACCAACTGGGAGAAACTCTTCCCGCTCTCTCCTACATTCCCTGTCACATTCAAGGTGGATCTGCATAGCGTTCTAGACTTCATAGTTAAGATAAACATTTCTATGATATCTACTCATAATTCCCGACTAATCTCACAAGACAATTGCTACATCCGAACTTGATTATTTTCTTACTATTCTCCGCCATTTGTTTGTGCAGTGTGGACATTAATTTCTCCAGTGGTGAGACAGGCAAAAGTAAGGAATCATGAAGAAGGTGTGCAAGAAGCAAATGGTTCAGCAATTCCTTGACAATGAACTTCAGAACTTCGGGAAGATTTTATTTTTGTATCCTCATTATTTTGTCCCATCCATTTTTTATTAAATACCTGTTCTTGTTGTTCTTTATCTTAAGATAGAAAATGATAAAAAGTGTCGCAAGATTCATCAAATGCCTTTGAACTGTAATGAACTCAAGAAACCCATATTTAAAGAGTCGCAAAAGTTAGATACATCCCGTAGATATATGTATTAGATTATTCATTTATCACTATAATAATTGGTTCTTATTAGGTCAAGAACAACCCGTTGTAAGTTATCAATCCTCGGGTAAGTTATCAATCCTCTCCGCACTCTGTGACCTTTCCTTCAAAACTCTCTTGAATCGCACCCATGAACTCTTGAAGCAAAAATCCAGTCAACCCGCTTATATATATATATACACGAGCTGATTGAACTAAATTTTTGTTTTTAAAATTATTTAAGTACAATCATCCAAAGAATTATTTTTTAAAACTATTCTTTCCAAAAACTGAAAATTATTTTAAACATCTCACCTTCATTATGAACTGATCAATAAGAGCATTCTTTCGATAGATAACTCTTCTATCCAGTTCATTAAAATATCCAAGCACATTAGTTTATCCCATCTATTTGAATGATCGATCTCAACACGAAAAAAACCATCCAATCGAGTTCAAGAATAGAAAATTAGATATTATTTCCCTGATGACAATGTAGAAGGGAATTCAAAGTGGAACAGATTAAACATATCACTAAAAATCCAACTGCCAAATTATATGCTAATATTTATTTCTTATAAGATGTATTTGGTTTGGTTATACCCTCCACAATGAATAATAGCTATCTTCAGGAACCTACCTACTCAACTCAACTATGAAAATTCTGAAAATAATGGCCGAAGCTAATTCCAAGAACTAATTCATCAAAAGCATGCATATCTTCAAGAACAGATCCAACAACTTCACCATTTTTGGTGGTTCATATCAACTCCAAAATCCAAATTGATCTAAGATTTTCAGCAGTGTATAAAGAGTAGAGTTCATACCTCTTTGCAGATCACCACAAGAATATTCAATCCTCTGAGTTCTACAAGCAAGAGAAGCTCTGCATACCGACTCTGCAACATGTTCAGGCAATCGTCTTCTCGCGCCTTCATCGCAATGGCGATCATTGTGGTGCATTTTGTGGCGTTTAAGTCTGCAGCTGTCACCGCTAATACTGGGGGGGAGGAGTCTGTCCTTGAATTTTACATGCATGACATTCTCGGCGGTGGTAGCCCAACAGCGAGACCGATTACTGGCCTACTGGGGAACATATACACTGGTCAAGTACCCTTTGCCACACCTATAGACTTCCTTCCCCCAGACGATGGCATAGCAATTCCAAATGCTAATGGTGCTCTCCCCACTGTTAACGGCAACAATGGGATCCCTCTAGGGACTGGCTTGTCTGGTACAGCTTTTGCTGGAAATCCCAACCCACAAAATCTTCCCCAGACCCAATTGGGACCTGATGGGTTGGGACTAGGCTTTGGAACAATTACCGTCATCGATGACATCTTGACAACAGCACCGGAGTTGGGCTCACAGTTAATTGGCAAGGCACAAGGGGTGTATGTGGCTAGTTCTGCTGATGGGACTACACAGATGATGGCATTTACGGCCATGGTTGAAGGAGGAGAGTATGGTGACAGCCTCAACTTCTATGGAGTATTCAGGATTAATAGCCCCTCATCACATTTGTCTGTGACTGGAGGAACTGGCAAGTTCAAGCACGCACGTGGGATTGCAGAGGTGCGCTCGCTCATTCCTCCTGGCCAGCACGTCACTGATGGAGCAGAAACATTGCTGCGGTTCATTGTCCATCTAAGCTATTGA

mRNA sequence

GCATGTCTTTTATGAAGGGTAATCTTGCTTTTCTGTTCTTGTATGATGTTTGGGTAAGAACAATGTGATAGAGAATATGAAAGGAAGTGGTGAAAGTTTCTGTTCACTGCCACGGGGAAAATCATGAGCCCGACAAAGCTGTTCCTTCCTCTGCAAAGGGAGAGAATTGTTTATCAAATCAATTATCTTCTCAATCAAGAAAGTTGTTACTTGAAGATAATAGAAAAGAGAGGTCTCAAAGGTAATGAGCTGTCAGGGCAAAACGTCAAAAGAATAGGCCAAAAGTGAATGAGCCAAGGGGGTGAAGGTAGAGGAGTACATACCGGACAAGGAAACTCTGAATTTGTTTCTTGGGGAACTCCAAATGCTGATTATGCTAGTGAAAAGAAGAAGTCCTTGCGAGTTCGCTACGTATACGCCGTTATCTTCCTGTTGACGAATCTCATTGCTTGGTTTATTCGAGATTATGGGAAAAGGATTATACCTCAGCTACGTTATCTTAAATCCTGTGGAGCAGGAGGACAAGATTGTTTTCTCACACTCGGAGTTCTTCGTGTGAGCTTAGGATGCTTTATATTTTTCTTTCTGATGTTTCTCTCTACGTCCAGAACAAGAAAATTACACGAACCTCGAAATGTCTGGCATTCTAGTTGGTGGAGCTTGAAGTTCTTTGTGTTTATTGTTTCAATGTTGGTTCCATTCTTCTTCCCTCCAGCTCTTATCCAATTATATGGTGAAGTTGCTCGTGTAGGTGCAGGGATATTTCTCCTCCTCCAACTGGTAAGTGTTATCCAGTTTATCTCATGGTGGAACAAGTACTGGATGCCTGATGAAAAAATGAAGCAGATCTGCTCGCTTGGATTATTCACGTCGACGATCTTTTACATAGCTTCATTCTGCGGGATCGGTTTGATGTACTCCTTATATGTTCCAAAACTGAGATGTGTTCTCAATATATTCTTCATTTCTTGGACTTTGATTCTCCTCATTGTGATGATGGTTGTGTCTTTACATTCAAAGGTCAATAGAGGTCTGTTATCGTCCGGTATCATGGCTTCGTATGTCGTCTTCCTCTGCTGGTCTGCCATTAGAAGCGAACCGGCGACCGAGAAATGCAGTGCACAGAAGCAAGAGAGTGGGAATAGTGACTGGATTACTATACTTAGCTTCTTAATTGCTATCTGTGCAGTTGTCATGGCAACCTTCTCAACTGGTATTGATTCACAATCATTTCAGTTTCGTAAAGACAAGGCGAAAGAGGAAGATGACATCCCTTACAAGTATGGTTTTTTCCATATCATATTCTCTCTGGGAGCCATGTACTTTGCAATGCTCTTCATCAGCTGGAACCTCAACAACTCAGCCACAAAGTGGAGCATGGATGTTGGATGGACAAGTACATGGGTTAAAATCATTAATGAATGGCTTGCAGCCTCAATATACTTGTGGACATTAATTTCTCCAGTGGTGAGACAGGCAAAAGTAAGGAATCATGAAGAAGATTTTCAGCAGTGTATAAAGAGTAGAGTTCATACCTCTTTGCAGATCACCACAAGAATATTCAATCCTCTGAGTTCTACAAGCAAGAGAAGCTCTGCATACCGACTCTGCAACATGTTCAGGCAATCGTCTTCTCGCGCCTTCATCGCAATGGCGATCATTGTGGTGCATTTTGTGGCGTTTAAGTCTGCAGCTGTCACCGCTAATACTGGGGGGGAGGAGTCTGTCCTTGAATTTTACATGCATGACATTCTCGGCGGTGGTAGCCCAACAGCGAGACCGATTACTGGCCTACTGGGGAACATATACACTGGTCAAGTACCCTTTGCCACACCTATAGACTTCCTTCCCCCAGACGATGGCATAGCAATTCCAAATGCTAATGGTGCTCTCCCCACTGTTAACGGCAACAATGGGATCCCTCTAGGGACTGGCTTGTCTGGTACAGCTTTTGCTGGAAATCCCAACCCACAAAATCTTCCCCAGACCCAATTGGGACCTGATGGGTTGGGACTAGGCTTTGGAACAATTACCGTCATCGATGACATCTTGACAACAGCACCGGAGTTGGGCTCACAGTTAATTGGCAAGGCACAAGGGGTGTATGTGGCTAGTTCTGCTGATGGGACTACACAGATGATGGCATTTACGGCCATGGTTGAAGGAGGAGAGTATGGTGACAGCCTCAACTTCTATGGAGTATTCAGGATTAATAGCCCCTCATCACATTTGTCTGTGACTGGAGGAACTGGCAAGTTCAAGCACGCACGTGGGATTGCAGAGGTGCGCTCGCTCATTCCTCCTGGCCAGCACGTCACTGATGGAGCAGAAACATTGCTGCGGTTCATTGTCCATCTAAGCTATTGA

Coding sequence (CDS)

ATGAGCCAAGGGGGTGAAGGTAGAGGAGTACATACCGGACAAGGAAACTCTGAATTTGTTTCTTGGGGAACTCCAAATGCTGATTATGCTAGTGAAAAGAAGAAGTCCTTGCGAGTTCGCTACGTATACGCCGTTATCTTCCTGTTGACGAATCTCATTGCTTGGTTTATTCGAGATTATGGGAAAAGGATTATACCTCAGCTACGTTATCTTAAATCCTGTGGAGCAGGAGGACAAGATTGTTTTCTCACACTCGGAGTTCTTCGTGTGAGCTTAGGATGCTTTATATTTTTCTTTCTGATGTTTCTCTCTACGTCCAGAACAAGAAAATTACACGAACCTCGAAATGTCTGGCATTCTAGTTGGTGGAGCTTGAAGTTCTTTGTGTTTATTGTTTCAATGTTGGTTCCATTCTTCTTCCCTCCAGCTCTTATCCAATTATATGGTGAAGTTGCTCGTGTAGGTGCAGGGATATTTCTCCTCCTCCAACTGGTAAGTGTTATCCAGTTTATCTCATGGTGGAACAAGTACTGGATGCCTGATGAAAAAATGAAGCAGATCTGCTCGCTTGGATTATTCACGTCGACGATCTTTTACATAGCTTCATTCTGCGGGATCGGTTTGATGTACTCCTTATATGTTCCAAAACTGAGATGTGTTCTCAATATATTCTTCATTTCTTGGACTTTGATTCTCCTCATTGTGATGATGGTTGTGTCTTTACATTCAAAGGTCAATAGAGGTCTGTTATCGTCCGGTATCATGGCTTCGTATGTCGTCTTCCTCTGCTGGTCTGCCATTAGAAGCGAACCGGCGACCGAGAAATGCAGTGCACAGAAGCAAGAGAGTGGGAATAGTGACTGGATTACTATACTTAGCTTCTTAATTGCTATCTGTGCAGTTGTCATGGCAACCTTCTCAACTGGTATTGATTCACAATCATTTCAGTTTCGTAAAGACAAGGCGAAAGAGGAAGATGACATCCCTTACAAGTATGGTTTTTTCCATATCATATTCTCTCTGGGAGCCATGTACTTTGCAATGCTCTTCATCAGCTGGAACCTCAACAACTCAGCCACAAAGTGGAGCATGGATGTTGGATGGACAAGTACATGGGTTAAAATCATTAATGAATGGCTTGCAGCCTCAATATACTTGTGGACATTAATTTCTCCAGTGGTGAGACAGGCAAAAGTAAGGAATCATGAAGAAGATTTTCAGCAGTGTATAAAGAGTAGAGTTCATACCTCTTTGCAGATCACCACAAGAATATTCAATCCTCTGAGTTCTACAAGCAAGAGAAGCTCTGCATACCGACTCTGCAACATGTTCAGGCAATCGTCTTCTCGCGCCTTCATCGCAATGGCGATCATTGTGGTGCATTTTGTGGCGTTTAAGTCTGCAGCTGTCACCGCTAATACTGGGGGGGAGGAGTCTGTCCTTGAATTTTACATGCATGACATTCTCGGCGGTGGTAGCCCAACAGCGAGACCGATTACTGGCCTACTGGGGAACATATACACTGGTCAAGTACCCTTTGCCACACCTATAGACTTCCTTCCCCCAGACGATGGCATAGCAATTCCAAATGCTAATGGTGCTCTCCCCACTGTTAACGGCAACAATGGGATCCCTCTAGGGACTGGCTTGTCTGGTACAGCTTTTGCTGGAAATCCCAACCCACAAAATCTTCCCCAGACCCAATTGGGACCTGATGGGTTGGGACTAGGCTTTGGAACAATTACCGTCATCGATGACATCTTGACAACAGCACCGGAGTTGGGCTCACAGTTAATTGGCAAGGCACAAGGGGTGTATGTGGCTAGTTCTGCTGATGGGACTACACAGATGATGGCATTTACGGCCATGGTTGAAGGAGGAGAGTATGGTGACAGCCTCAACTTCTATGGAGTATTCAGGATTAATAGCCCCTCATCACATTTGTCTGTGACTGGAGGAACTGGCAAGTTCAAGCACGCACGTGGGATTGCAGAGGTGCGCTCGCTCATTCCTCCTGGCCAGCACGTCACTGATGGAGCAGAAACATTGCTGCGGTTCATTGTCCATCTAAGCTATTGA

Protein sequence

MSQGGEGRGVHTGQGNSEFVSWGTPNADYASEKKKSLRVRYVYAVIFLLTNLIAWFIRDYGKRIIPQLRYLKSCGAGGQDCFLTLGVLRVSLGCFIFFFLMFLSTSRTRKLHEPRNVWHSSWWSLKFFVFIVSMLVPFFFPPALIQLYGEVARVGAGIFLLLQLVSVIQFISWWNKYWMPDEKMKQICSLGLFTSTIFYIASFCGIGLMYSLYVPKLRCVLNIFFISWTLILLIVMMVVSLHSKVNRGLLSSGIMASYVVFLCWSAIRSEPATEKCSAQKQESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKDKAKEEDDIPYKYGFFHIIFSLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWLAASIYLWTLISPVVRQAKVRNHEEDFQQCIKSRVHTSLQITTRIFNPLSSTSKRSSAYRLCNMFRQSSSRAFIAMAIIVVHFVAFKSAAVTANTGGEESVLEFYMHDILGGGSPTARPITGLLGNIYTGQVPFATPIDFLPPDDGIAIPNANGALPTVNGNNGIPLGTGLSGTAFAGNPNPQNLPQTQLGPDGLGLGFGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAFTAMVEGGEYGDSLNFYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSLIPPGQHVTDGAETLLRFIVHLSY

Homology

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BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot
Match: Q9T0H8 (Dirigent protein 18 OS=Arabidopsis thaliana OX=3702 GN=DIR18 PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.2e-90
Identity = 173/252 (68.65%), Postives = 197/252 (78.17%), Query Frame = 0


Query: 443 MFRQSSSRAFIAMAIIVVHFVAFKSAAVTANTGGEESVLEFYMHDILGGGSPTARPITGL 502
           M +QS      ++ +I   F    +A    +   E+ + E YMHDILGG SPTARPITGL
Sbjct: 1   MMKQSPFSLLTSIFLIAALF----TATTALDPAPEDPIFELYMHDILGGSSPTARPITGL 60

Query: 503 LGNIYTGQVPFATPIDFLPPDDGIAIPNANGALPTVNGNNGIPLGTGLSGTAFAGNPNPQ 562
           LGNIY GQVPFA  I F+PP +G+AIPNANGA+PTVNG NGIPLGTGLSGTAF+G    Q
Sbjct: 61  LGNIYNGQVPFAKQIGFVPPQNGVAIPNANGAMPTVNGINGIPLGTGLSGTAFSG----Q 120

Query: 563 NLP--QTQLGPDGLGLGFGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAF 622
           NL   QTQLGPDGL LGFGTITVIDDI+T+ P+LGSQ +GKAQGVYVASSADG+TQMMAF
Sbjct: 121 NLNGIQTQLGPDGLSLGFGTITVIDDIITSGPDLGSQPLGKAQGVYVASSADGSTQMMAF 180

Query: 623 TAMVEGGEYGDSLNFYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSLIPPGQHVTDGA 682
           TAM+EGGEY D+LNFYG++RI S  SHLSVTGGTG+FK+A G AEVR LIP GQH  DGA
Sbjct: 181 TAMLEGGEYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPAGQHFVDGA 240

Query: 683 ETLLRFIVHLSY 693
           E LLR IVHL Y
Sbjct: 241 EMLLRIIVHLKY 244

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BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot
Match: Q7Y225 (Dirigent protein 16 OS=Arabidopsis thaliana OX=3702 GN=DIR16 PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 9.3e-90
Identity = 174/252 (69.05%), Postives = 196/252 (77.78%), Query Frame = 0


Query: 443 MFRQSSSRAFIAMAIIVVHFVAFKSAAVTANTGGEESVLEFYMHDILGGGSPTARPITGL 502
           M +QS       +   V  FVA        +   E+ + E YMHD+LGG SPTARPITGL
Sbjct: 2   MIKQSPFLLLTTILFTVAVFVA------ALDPAPEDPIFELYMHDLLGGSSPTARPITGL 61

Query: 503 LGNIYTGQVPFATPIDFLPPDDGIAIPNANGALPTVNGNNGIPLGTGLSGTAFAGNPNPQ 562
           LGNIY GQVPFA  I F PP++GIAIPNANGALPTVNG NG+PLGTGLSGTA++G    Q
Sbjct: 62  LGNIYNGQVPFAKQIGFTPPENGIAIPNANGALPTVNGINGVPLGTGLSGTAYSG----Q 121

Query: 563 NLP--QTQLGPDGLGLGFGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAF 622
           NL   QTQLGPDGL LGFGTITVIDDILT+ P+LGSQ +GKAQGVYVASSADG+TQMMAF
Sbjct: 122 NLNGIQTQLGPDGLSLGFGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADGSTQMMAF 181

Query: 623 TAMVEGGEYGDSLNFYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSLIPPGQHVTDGA 682
           TAM+EGGEY D+LNFYG++RI S  SHLSVTGGTG+FK+A G AEVR LIP GQH  DGA
Sbjct: 182 TAMLEGGEYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPSGQHEVDGA 241

Query: 683 ETLLRFIVHLSY 693
           E+LLR IVHL Y
Sbjct: 242 ESLLRIIVHLKY 243

[Close]

BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot
Match: Q9LQQ0 (Dirigent protein 25 OS=Arabidopsis thaliana OX=3702 GN=DIR25 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.4e-42
Identity = 111/239 (46.44%), Postives = 141/239 (59.00%), Query Frame = 0


Query: 478 ESVLEFYMHDILGGGSPTARPITGLLGN-IYTGQVPFATPIDFLPPDDGIAIPNANGALP 537
           ++ L F+MHDILGG +PTAR +TG++ N   +GQ+PFA P       +G  +P +NG +P
Sbjct: 159 DNTLVFFMHDILGGSNPTARAVTGVVANAALSGQIPFAKP-------NGANLPVSNG-VP 218

Query: 538 TVNGNNGI------PLGTGLSGTAF-----AGNPNPQNLPQTQLG--PDGLGLG---FGT 597
           + N NNGI      PL  GL GT        GN     LP    G  P G  L    FGT
Sbjct: 219 SDNNNNGILNNNNVPLLVGLGGTTSNILQNNGNNMLNGLPVANGGQLPSGSSLQMLMFGT 278

Query: 598 ITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAFTAMVEGGEYGDSLNFYGVFR 657
           +TV+D+ LT   ELGS L+GKAQG YVAS+ DGT+Q MAFTAM E G Y DS++F+GV R
Sbjct: 279 LTVMDNELTEGHELGSGLLGKAQGFYVASALDGTSQTMAFTAMFESGGYEDSISFFGVHR 338

Query: 658 INSPSSHLSVTGGTGKFKHARGIAEVRSLIPPG-------QHVTDGAETLLRFIVHLSY 693
             +  SHL V GGTGK+ +ARG A V++               TDG ET+L   V+LSY
Sbjct: 339 TAASESHLGVMGGTGKYVNARGFAIVKTFTGSSGTQQQQPHQFTDGLETVLECTVYLSY 389

[Close]

BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot
Match: Q9SIA8 (Dirigent protein 10 OS=Arabidopsis thaliana OX=3702 GN=DIR10 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.6e-41
Identity = 110/245 (44.90%), Postives = 142/245 (57.96%), Query Frame = 0


Query: 474 TGGEESVLEFYMHDILGGGSPTARPITGLLGN-IYTGQVPFATPIDFLPPDDGIAIPNAN 533
           + G ++ L F+MHDILGG +PTAR +TG++ N   +GQ+PFA P       +G  +P +N
Sbjct: 211 SAGPDNTLVFFMHDILGGSNPTARAVTGVVANPALSGQLPFAKP-------NGANLPVSN 270

Query: 534 GALPTVNGNNGI------PLGTGLSGTA---FAGNPNPQNL----PQTQLG--PDGLGLG 593
           G +P+ N NNGI      P   GL GT       N N  N+    P    G  P G  L 
Sbjct: 271 G-VPSNNNNNGIVNNNNVPFLVGLGGTTANILQNNNNGNNILNGFPVASGGQLPSGSALQ 330

Query: 594 ---FGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAFTAMVEGGEYGDSLN 653
              FGT+TVIDD LT   ELGS L+GKAQG YVAS+ DGT+Q MAFTAM E G Y DS++
Sbjct: 331 MLMFGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDSIS 390

Query: 654 FYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSLIPPG-------QHVTDGAETLLRFI 693
           F+GV R     SH+ V GGTGK+ +ARG A +++               TDG ET++   
Sbjct: 391 FFGVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGTQQNQPHQFTDGLETVVECT 447

[Close]

BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot
Match: Q9M3C8 (Dirigent protein 24 OS=Arabidopsis thaliana OX=3702 GN=DIR24 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-39
Identity = 101/242 (41.74%), Postives = 144/242 (59.50%), Query Frame = 0


Query: 474 TGGEESVLEFYMHDILGGGSPTARPITGLLGNIYTGQVPFA-TPIDFLPPDDGIAIPNAN 533
           TGG E +LEF+MHD+LGG  P+AR +TG++       +PF+ +  +  P D+ + + NAN
Sbjct: 63  TGGPEPILEFFMHDVLGGSHPSARVVTGIVAQTEVNGIPFSKSSNNIFPVDNAVPLVNAN 122

Query: 534 GALPTVNGNNGIPLGTGLSGTA-----------FAGNPNPQNLP---QTQLGPDGL--GL 593
                +N N   PL TGLSG+              G+ +  NLP     QL P      L
Sbjct: 123 SINNLINPNTA-PLLTGLSGSQANTVIQNSNGNSQGSLSSNNLPFVTTGQLPPIAALQQL 182

Query: 594 GFGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAFTAMVEGGE-----YGD 653
            FG+ITV+DD LT   ELGS +IG+AQG Y+ASS DGT+Q ++ T ++           D
Sbjct: 183 MFGSITVVDDELTEGHELGSAIIGRAQGFYLASSLDGTSQTLSLTVLLHEDHDHHDTLDD 242

Query: 654 SLNFYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSL-IPPGQHVTDGAETLLRFIVHL 693
           +++F+GV R  S +SH++V GGTG+F+HA+G A V +L     QHVTDG +T+L F V+L
Sbjct: 243 AISFFGVHRTASHASHIAVVGGTGRFEHAKGYAVVETLHNQEDQHVTDGHDTILHFSVYL 302

[Close]

BLAST of CmaCh06G012740 vs. TAIR 10
Match: AT2G33205.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 526.9 bits (1356), Expect = 2.4e-149
Identity = 261/377 (69.23%), Postives = 302/377 (80.11%), Query Frame = 0


Query: 29  YASEKKKSLRVRYVYAVIFLLTNLIAWFIRDYGKRIIPQLRYLKSCGAGGQDCFLTLGVL 88
           Y  EK KSLR RY Y  IFL+ NL AWFIRDY ++ +  L Y+ SCG  G  CF TLGVL
Sbjct: 39  YYQEKNKSLRARYTYGTIFLIINLCAWFIRDYAQKALALLPYVSSCGPEGSRCFHTLGVL 98

Query: 89  RVSLGCFIFFFLMFLSTSRTRKLHEPRNVWHSSWWSLKFFVFIVSMLVPFFFPPALIQLY 148
           RVSLGCFIF+F+MFLST  T KLHE +N WHS  W  KFF+ ++ M+  FF P   IQ+Y
Sbjct: 99  RVSLGCFIFYFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLYIQIY 158

Query: 149 GEVARVGAGIFLLLQLVSVIQFISWWNKYWMPDEKMKQICSLGLFTSTIFYIASFCGIGL 208
           GE+ARVGAGIFL LQLVSVI+FI+WWN YWMP  + KQ CS GL  S +FYI S CGI +
Sbjct: 159 GEIARVGAGIFLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLVMSIVFYIGSVCGIAV 218

Query: 209 MYSLYVPKLRCVLNIFFISWTLILLIVMMVVSLHSKV-NRGLLSSGIMASYVVFLCWSAI 268
           MY  Y     C LNIFFISWT+ILLIVMMV+SLHSKV NRGLLSSGIMASY+VFLCWSAI
Sbjct: 219 MYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLCWSAI 278

Query: 269 RSEPATEKCSAQKQESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKDKAKEEDD 328
           RSEP+  KC+A  Q S ++DW TILSFLIAI A+VMATFSTGIDS+SF+FRKD+AKEEDD
Sbjct: 279 RSEPSHTKCNAHTQNS-HTDWTTILSFLIAIGAIVMATFSTGIDSESFRFRKDEAKEEDD 338

Query: 329 IPYKYGFFHIIFSLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWLAASIYLW 388
           IPY YGFFH++FSLGAMYFAMLFISWNL++S  KWS+DVGWTSTWVKI+NEW AA+IYLW
Sbjct: 339 IPYSYGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVNEWFAAAIYLW 398

Query: 389 TLISPVVRQAKVRNHEE 405
            LI+P+VRQ +V  HE+
Sbjct: 399 KLIAPIVRQHRV--HEQ 412

[Close]

BLAST of CmaCh06G012740 vs. TAIR 10
Match: AT4G13345.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 406.0 bits (1042), Expect = 6.1e-113
Identity = 187/359 (52.09%), Postives = 259/359 (72.14%), Query Frame = 0


Query: 40  RYVYAVIFLLTNLIAWFIRDYGKRIIPQLRYLKSCGAGGQDCFLTLGVLRVSLGCFIFFF 99
           RYVY +IFLL NL+AW +RDYG+  + ++R  K+C  GG DC  T GVLRVS GCF+F+F
Sbjct: 34  RYVYGLIFLLANLLAWALRDYGRGALTEMRKFKNCKEGG-DCLGTEGVLRVSFGCFLFYF 93

Query: 100 LMFLSTSRTRKLHEPRNVWHSSWWSLKFFVFIVSMLVPFFFPPALIQLYGEVARVGAGIF 159
           +MFLST  T K H  R+ WHS WW  K F+ +   + PF  P ++IQ YGE+A  GAG+F
Sbjct: 94  IMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSIIQFYGEIAHFGAGVF 153

Query: 160 LLLQLVSVIQFISWWNKYWMPDEKMKQICSLGLFTSTIFYIASFCGIGLMYSLYVPKLRC 219
           LL+QL+S+I FI+W N+ +   +  ++     +  +T  Y     G+ LMY  YVP+  C
Sbjct: 154 LLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAYTVCILGVILMYIWYVPEPSC 213

Query: 220 VLNIFFISWTLILLIVMMVVSLHSKVNRGLLSSGIMASYVVFLCWSAIRSEPATEKCSAQ 279
           +LNIFFI+WTL L+ +M  +SLH K+N G L+  +M  YVVF+CW AIRSEP  E C+ +
Sbjct: 214 LLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAIRSEPVGETCNRK 273

Query: 280 KQESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKDKAKEEDDIPYKYGFFHIIF 339
            + S  +DW+TI+SF++A+ A+V+ATFSTG+DSQ FQFRKD+  EED IPY YGFFH +F
Sbjct: 274 AEGSSRTDWLTIISFVVALLAMVIATFSTGVDSQCFQFRKDENHEEDAIPYGYGFFHFVF 333

Query: 340 SLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWLAASIYLWTLISPVVRQAK 399
           + GAMYFAML + WN+++S  KW++DVGWTSTWV+I+NEWLA  +Y+W L++P+V +++
Sbjct: 334 ATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVYIWMLVAPMVLKSR 391

[Close]

BLAST of CmaCh06G012740 vs. TAIR 10
Match: AT4G13345.2 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 402.9 bits (1034), Expect = 5.2e-112
Identity = 185/359 (51.53%), Postives = 258/359 (71.87%), Query Frame = 0


Query: 40  RYVYAVIFLLTNLIAWFIRDYGKRIIPQLRYLKSCGAGGQDCFLTLGVLRVSLGCFIFFF 99
           RYVY +IFLL NL+AW +RDYG+  + ++R  K+C  GG DC  T GVLRVS GCF+F+F
Sbjct: 34  RYVYGLIFLLANLLAWALRDYGRGALTEMRKFKNCKEGG-DCLGTEGVLRVSFGCFLFYF 93

Query: 100 LMFLSTSRTRKLHEPRNVWHSSWWSLKFFVFIVSMLVPFFFPPALIQLYGEVARVGAGIF 159
           +MFLST  T K H  R+ WHS WW  K F+ +   + PF  P ++IQ YGE+A  GAG+F
Sbjct: 94  IMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSIIQFYGEIAHFGAGVF 153

Query: 160 LLLQLVSVIQFISWWNKYWMPDEKMKQICSLGLFTSTIFYIASFCGIGLMYSLYVPKLRC 219
           LL+QL+S+I FI+W N+ +   +  ++     +  +T  Y     G+ LMY  YVP+  C
Sbjct: 154 LLIQLISIISFITWLNECFQAQKDAERCHVHVMLLATTAYTVCILGVILMYIWYVPEPSC 213

Query: 220 VLNIFFISWTLILLIVMMVVSLHSKVNRGLLSSGIMASYVVFLCWSAIRSEPATEKCSAQ 279
           +LNIFFI+WTL L+ +M  +SLH K+N G L+  +M  YVVF+CW AIR +P  E C+ +
Sbjct: 214 LLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAIRRQPVGETCNRK 273

Query: 280 KQESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKDKAKEEDDIPYKYGFFHIIF 339
            + S  +DW+TI+SF++A+ A+V+ATFSTG+DSQ FQFRKD+  EED IPY YGFFH +F
Sbjct: 274 AEGSSRTDWLTIISFVVALLAMVIATFSTGVDSQCFQFRKDENHEEDAIPYGYGFFHFVF 333

Query: 340 SLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWLAASIYLWTLISPVVRQAK 399
           + GAMYFAML + WN+++S  KW++DVGWTSTWV+I+NEWLA  +Y+W L++P+V +++
Sbjct: 334 ATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVYIWMLVAPMVLKSR 391

[Close]

BLAST of CmaCh06G012740 vs. TAIR 10
Match: AT3G24460.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 390.2 bits (1001), Expect = 3.5e-108
Identity = 182/363 (50.14%), Postives = 255/363 (70.25%), Query Frame = 0


Query: 40  RYVYAVIFLLTNLIAWFIRDYGKRIIPQLRYLKSCGAGGQDCFLTLGVLRVSLGCFIFFF 99
           RYVY +IFL+ NL+AW  RDYG+  + ++   K+C  GG++C  T GVLRVSLGCF+F+F
Sbjct: 41  RYVYGLIFLIANLLAWAARDYGRGALRKVTRFKNC-KGGENCLGTDGVLRVSLGCFLFYF 100

Query: 100 LMFLSTSRTRKLHEPRNVWHSSWWSLKFFVFIVSMLVPFFFPPALIQLYGEVARVGAGIF 159
           +MFLST  T K H  R+ WHS WW +K  ++    ++PF  P ++I LYGE+A  GAG+F
Sbjct: 101 VMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPSSIIHLYGEIAHFGAGVF 160

Query: 160 LLLQLVSVIQFISWWNKYWMPDEKMKQICSLGLFTSTIFYIASFCGIGLMYSLYVPKLRC 219
           LL+QL+SVI FI W N+ +   +  ++     +  ST  Y     G+ LMY  Y P   C
Sbjct: 161 LLIQLISVISFIQWLNECYQSQKDAERCRVYVMLLSTTSYTVCIVGVILMYIWYAPDSSC 220

Query: 220 VLNIFFISWTLILLIVMMVVSLHSKVNRGLLSSGIMASYVVFLCWSAIRSEPATEKCSAQ 279
           +LNIFFI+WTL L+ +M  ++LH KVN G L+  +M  YVVF+CW AIRSEP  E C+ +
Sbjct: 221 LLNIFFITWTLFLIQLMTSIALHPKVNAGYLTPALMGLYVVFICWCAIRSEPVGESCNRK 280

Query: 280 KQESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKD----KAKEEDDIPYKYGFF 339
              S  +DW+TI+SF++A+ A+V+ATFSTGIDSQ FQF+KD    + + EDD+PY YGFF
Sbjct: 281 AAASNRTDWLTIISFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEAEDDVPYGYGFF 340

Query: 340 HIIFSLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWLAASIYLWTLISPVVR 399
           H +F+ GAMYFAML I WN ++   KW++DVGWTSTWV+++NEWLA  +Y+W L++P++ 
Sbjct: 341 HFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVYIWMLVAPLIL 400

[Close]

BLAST of CmaCh06G012740 vs. TAIR 10
Match: AT4G13580.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-91
Identity = 173/252 (68.65%), Postives = 197/252 (78.17%), Query Frame = 0


Query: 443 MFRQSSSRAFIAMAIIVVHFVAFKSAAVTANTGGEESVLEFYMHDILGGGSPTARPITGL 502
           M +QS      ++ +I   F    +A    +   E+ + E YMHDILGG SPTARPITGL
Sbjct: 1   MMKQSPFSLLTSIFLIAALF----TATTALDPAPEDPIFELYMHDILGGSSPTARPITGL 60

Query: 503 LGNIYTGQVPFATPIDFLPPDDGIAIPNANGALPTVNGNNGIPLGTGLSGTAFAGNPNPQ 562
           LGNIY GQVPFA  I F+PP +G+AIPNANGA+PTVNG NGIPLGTGLSGTAF+G    Q
Sbjct: 61  LGNIYNGQVPFAKQIGFVPPQNGVAIPNANGAMPTVNGINGIPLGTGLSGTAFSG----Q 120

Query: 563 NLP--QTQLGPDGLGLGFGTITVIDDILTTAPELGSQLIGKAQGVYVASSADGTTQMMAF 622
           NL   QTQLGPDGL LGFGTITVIDDI+T+ P+LGSQ +GKAQGVYVASSADG+TQMMAF
Sbjct: 121 NLNGIQTQLGPDGLSLGFGTITVIDDIITSGPDLGSQPLGKAQGVYVASSADGSTQMMAF 180

Query: 623 TAMVEGGEYGDSLNFYGVFRINSPSSHLSVTGGTGKFKHARGIAEVRSLIPPGQHVTDGA 682
           TAM+EGGEY D+LNFYG++RI S  SHLSVTGGTG+FK+A G AEVR LIP GQH  DGA
Sbjct: 181 TAMLEGGEYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPAGQHFVDGA 240

Query: 683 ETLLRFIVHLSY 693
           E LLR IVHL Y
Sbjct: 241 EMLLRIIVHLKY 244

The following BLAST results are available for this feature:

BLAST of CmaCh06G012740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0H8	4.2e-90	68.65	Dirigent protein 18 OS=Arabidopsis thaliana OX=3702 GN=DIR18 PE=2 SV=1	[more]
Q7Y225	9.3e-90	69.05	Dirigent protein 16 OS=Arabidopsis thaliana OX=3702 GN=DIR16 PE=2 SV=1	[more]
Q9LQQ0	9.4e-42	46.44	Dirigent protein 25 OS=Arabidopsis thaliana OX=3702 GN=DIR25 PE=3 SV=1	[more]
Q9SIA8	3.6e-41	44.90	Dirigent protein 10 OS=Arabidopsis thaliana OX=3702 GN=DIR10 PE=2 SV=1	[more]
Q9M3C8	1.1e-39	41.74	Dirigent protein 24 OS=Arabidopsis thaliana OX=3702 GN=DIR24 PE=2 SV=1	[more]

BLAST of CmaCh06G012740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33205.1	2.4e-149	69.23	Serinc-domain containing serine and sphingolipid biosynthesis protein	[more]
AT4G13345.1	6.1e-113	52.09	Serinc-domain containing serine and sphingolipid biosynthesis protein	[more]
AT4G13345.2	5.2e-112	51.53	Serinc-domain containing serine and sphingolipid biosynthesis protein	[more]
AT3G24460.1	3.5e-108	50.14	Serinc-domain containing serine and sphingolipid biosynthesis protein	[more]
AT4G13580.1	3.0e-91	68.65	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 559..684 e-value: 2.7E-10 score: 42.0
IPR005016	Serine incorporator/TMS membrane protein	PFAM	PF03348	Serinc	coord: 33..395 e-value: 2.1E-66 score: 224.7
IPR005016	Serine incorporator/TMS membrane protein	PANTHER	PTHR10383	SERINE INCORPORATOR	coord: 23..408
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 562..668 e-value: 2.5E-27 score: 95.5
None	No IPR available	PANTHER	PTHR10383:SF23	SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN	coord: 23..408

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G012740.1	CmaCh06G012740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane