CmaCh06G012380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G012380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RPM1-interacting protein 4-like isoform X1
Location	Cma_Chr06: 8254705 .. 8257674 (+)
RNA-Seq Expression	CmaCh06G012380
Synteny	CmaCh06G012380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCGATGGAAGGGTCACTGTCTGATGATTTGAATTCTCCGGTTGTGAAGTTCTTCGTCTTCAATCATTCGTCATCGCGCTGACCTCATCTTGTTCATTTCCATTTTTCGATACTCTCTCTCTCTTCTTTGTGTTCATTTCTCCAAAAGATTTAGTTAAAAAGTGAAAAATGATGCAAAACTTTTGCTCCAGAAAGTGGAGTGAAAAATGTTGCTGTCAAATCGTTTTCTTCTCCCCAATTTTTTTCATTTTAGTTCACCAAAAGCTTCCGTTAAAAAAGGTCATGAAATTCTACAGATCCGTCTTCCAATTGCAATATTATTCGATTTCCAGAGGGTTTTCACATTAATTTTGGATCATGTTTCGGGTCCTACTTCGAGAATCTAGACTTTCGAGTCAATAATGTCGCTGAGTAAGCCATTAATTTCATGGAAGCTTGCTTTTCTTTAGCTAATTGGTTGATCGTTTTCATGCCAGTGCTCTGTATCTGCTTCTATTATGGCCGTCGCTTTCGCCTAGTGTGGCCAATTTTTGTTTGTTTTAACTTCTGCTGTGCAGGTTGAACTTGGAAGAAGTTAAAATAGGTTGCTCGGTTTGATTTGGGAGTACAGTTTTGAGATTTCTAGCCTCGTCCTTAGGCTAATGGCTGTGAGTTTTCGAAAGTTCTCTACATTCTCTTCGTTTGTTATTTTGTGATTGCCATGTTCTTGACTGGTTCTGAAGCGATGGAGCTTACTGAATTTCTTTCGTCATCTTATTTATAAGTTGCGAACTATTGATATCTATGCTTTGGCCTCATTTTTTGAACTTTATATGCATATTTTTATGAGATCTTTCTTTTTTCGCTTTTCTTGTGTTCTGGCTGTTTATGGATGTATACAATGTAGAATCATATTCAATTGGTGTCGAGTTCAGAGATGAACAAGCTCGTTATTTCGTCGTTGATCTGACTATCTTGGAGTCTAGAACTGATTTGACCTTCTCTTCTCTAGCTTACCTTAATTAATGGGTTCAACCTGTAGGCTACTTTTAATTCTCTTTCCATGACTGAGTCTTTTGAACACATTATGTATCTTACTGAACTTTTTAAAGAAAAAGTAATTAGTTCTGTCTTTCTAAGACTGTGTCAAAGATTCAGTCAAGCCCGTTTCTCCTGTCATAAAGAAGAGACCATTTCCACTCCAAGAATTCCTTTAAGATGTTCAATGCCCATGTTTATTGTTCTGATTCATGTGGGAAATCTTATTGATACACAATTCGTAGGCGGTACCGCCATGGTAATAACACGAATTTGATACTATACTATTTAGAAACTATGGTAAGTAATTGGTATTGCTTTTAATGTCATGGCTGACAGCCTGAAAGAAGATGGTTATCCTTATTTTCCACCATGAGCAAGCTCATCTTTCATGAGTTTTGAATTTGGTTTATATATATAAATTTGTATGCTTCAAAGGTAAAACAATGCGTGCTGATTGCATATCGTCATTTTCTTTCACATGGATGGTTTTGTAACCTTTTCATAGATTTGTTACCATCTAGCTTTTAGGGACTATAAGGAAATTCCCTACCGGAAGTTTTGAGAAGTTGCAGGAATCTGCTTGAATTGGGTGAATTGCATGTAATTTTTAGAATATGCATGAATTCAATCCAGTTTAGAACCATAAATCTAGTTTCTTTGCTTATGGTTGGTCCACTGTAAATGATTTAGTAAGAATGAAAGACATTTTCATCTTCCCCTGCAGCAGAGTTTGCAAGTACCAAAATTTGGGAAGTGGGATGATGGGGAGGATGTCCCGTATACGACCTATTTTGACAATGCAACAAAGGCTATTTCCGAGAGGTTGAATTTAAATGATCCTCTTCAACAAGAGGAGATTTCGAAGCAACACGAAACTAGAGAAGGTGTTGTGAGGAGGCAAGCCGAGTCTCCATTGCACCGGGATGGTTCAGAACTGCCTGGTCAAGATTATGACAGTTTAAAATCAACCACGAGTCGGGGTCAACAAGCATTAAGGCAAAAGTACACTCAAGAACATTCGAGCTTGGAAGATGGTAATGCAAAAAAACACCTTGAATCTCCTTTGGACCATCAAACAAGGAGTTGGGTTAGCTTTAATTCCCCTCTTCATCAACGCCAGGGAAACAACATGGCCACTTTGAGAAATGGCGCAGCTTCTGACAGCAACATAGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACGAAATGGCGCAGCTTCTGACAGCAACATAGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACCGAAGCAAAAAGCGTTGTACCATCTTCGCCGTTACGGGACCGTAGGGGTTTGAGTTCACATAAAGGAGGTTGTCATGATGGTATAACTCCCTTGACTCCTGGAAGATCACGTCAACAATCCGCTCCTCGGGGCAATGAAACTGTAGTTTCTTCTTCTCATTTCCTTTTCTTTGTGTTTAATTGCACAAGTAGAGAGTCATCAAAAGATTTTGGAGATAGTAACAATCAACCAGGGTAAAGGTTGATAAAGAAAATGGTGTTTTGAGTGTCTGAATTTCCAGATTTGTTCTTTAGGTATTATCAGGTCTTTTAAACAAAAGCTGCCTAGAATTTGCTGAAATCAAATGGTTCATGACTTTGAATGACATGATCTCTTATGTTTGAGCTTGCAGCCTGATCGTAGCCCCACAGTTCCAAGATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGCAGCCTGATCGTAGCCCCACAGTTCCAAGATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACACAAGTATTTTCACCAGAGTACGTGAGGAGAGACAAACTGAGGAAGAAGGGGGTTTTCCGGTGGGGACTAACATTTCTCATGCTGACCGTCGTAATCGATCCGATGCCGAAAATTCTAGGTTTTCCGGTGGGGACTAA

mRNA sequence

ATGGGGGCGATGGAAGGGTCACTGTCTGATGATTTGAATTCTCCGGTTGTGAAGCGGTACCGCCATGGTAATAACACGAATTTGATACTATACTATTTAGAAACTATGCAGAGTTTGCAAGTACCAAAATTTGGGAAGTGGGATGATGGGGAGGATGTCCCGTATACGACCTATTTTGACAATGCAACAAAGGCTATTTCCGAGAGGTTGAATTTAAATGATCCTCTTCAACAAGAGGAGATTTCGAAGCAACACGAAACTAGAGAAGGTGTTGTGAGGAGGCAAGCCGAGTCTCCATTGCACCGGGATGGTTCAGAACTGCCTGGTCAAGATTATGACAGTTTAAAATCAACCACGAGTCGGGGTCAACAAGCATTAAGGCAAAAGTACACTCAAGAACATTCGAGCTTGGAAGATGGTAATGCAAAAAAACACCTTGAATCTCCTTTGGACCATCAAACAAGGAGTTGGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACGAAATGGCGCAGCTTCTGACAGCAACATAGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACCGAAGCAAAAAGCGTTGTACCATCTTCGCCGTTACGGGACCGTAGGGGTTTGAGTTCACATAAAGGAGGTTGTCATGATGGTATAACTCCCTTGACTCCTGGAAGATCACGTCAACAATCCGCTCCTCGGGGCAATGAAACTCCTGATCGTAGCCCCACAGTTCCAAGATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACACAAGTATTTTCACCAGAGTACGTGAGGAGAGACAAACTGAGGAAGAAGGGGGTTTTCCGGTGGGGACTAACATTTCTCATGCTGACCGTCGTAATCGATCCGATGCCGAAAATTCTAGGTTTTCCGGTGGGGACTAA

Coding sequence (CDS)

ATGGGGGCGATGGAAGGGTCACTGTCTGATGATTTGAATTCTCCGGTTGTGAAGCGGTACCGCCATGGTAATAACACGAATTTGATACTATACTATTTAGAAACTATGCAGAGTTTGCAAGTACCAAAATTTGGGAAGTGGGATGATGGGGAGGATGTCCCGTATACGACCTATTTTGACAATGCAACAAAGGCTATTTCCGAGAGGTTGAATTTAAATGATCCTCTTCAACAAGAGGAGATTTCGAAGCAACACGAAACTAGAGAAGGTGTTGTGAGGAGGCAAGCCGAGTCTCCATTGCACCGGGATGGTTCAGAACTGCCTGGTCAAGATTATGACAGTTTAAAATCAACCACGAGTCGGGGTCAACAAGCATTAAGGCAAAAGTACACTCAAGAACATTCGAGCTTGGAAGATGGTAATGCAAAAAAACACCTTGAATCTCCTTTGGACCATCAAACAAGGAGTTGGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACGAAATGGCGCAGCTTCTGACAGCAACATAGAAAATCCATCTCTCCATACACGACAGCATCCAAGGACCGAAGCAAAAAGCGTTGTACCATCTTCGCCGTTACGGGACCGTAGGGGTTTGAGTTCACATAAAGGAGGTTGTCATGATGGTATAACTCCCTTGACTCCTGGAAGATCACGTCAACAATCCGCTCCTCGGGGCAATGAAACTCCTGATCGTAGCCCCACAGTTCCAAGATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACACAAGTATTTTCACCAGAGTACGTGAGGAGAGACAAACTGAGGAAGAAGGGGGTTTTCCGGTGGGGACTAACATTTCTCATGCTGACCGTCGTAATCGATCCGATGCCGAAAATTCTAGGTTTTCCGGTGGGGACTAA

Protein sequence

MGAMEGSLSDDLNSPVVKRYRHGNNTNLILYYLETMQSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQAESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRSWKIHLSIHDSIQGRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD

Homology

[Close]

BLAST of CmaCh06G012380 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-13
Identity = 75/262 (28.63%), Postives = 109/262 (41.60%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAI---SERLNLNDPLQQEEISKQHETREGVV 95
           M    VPKFG W+  E+VPYT YFD A K     S+ +N NDP    +            
Sbjct: 1   MARSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD------------ 60

Query: 96  RRQAESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDH 155
             Q+++P H   S    +  D    T  R ++ +R +   E     D             
Sbjct: 61  -SQSQAPPHPPSSRTKPEQVD----TVRRSREHMRSREESELKQFGDAGG---------- 120

Query: 156 QTRSWKIHLSIHDSIQGRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLSSH 215
                    S +++   R G AS +N                 S    SPL        H
Sbjct: 121 ---------SSNEAANKRQGRASQNN-----------------SYDNKSPL--------H 180

Query: 216 KGGCHDGITPLTPGRSRQQSAP-RGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRVR 275
           K   +DG      G+SR +    R +E+P++   VP+FGDWDE++P+S++ YT IF +VR
Sbjct: 181 KNS-YDG-----TGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVR 187

Query: 276 EERQTEEEGGFPVGTNISHADR 294
           EER +        G N+S + R
Sbjct: 241 EERSS--------GANVSGSSR 187

[Close]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL
Match: A0A6J1IJ64 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473867 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.7e-142
Identity = 263/278 (94.60%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 96
           QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA
Sbjct: 3   QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 62

Query: 97  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 156
           ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS
Sbjct: 63  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 122

Query: 157 WKIHLSIHDSIQG------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS 216
           W    S     QG      RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS
Sbjct: 123 WVSFNSPLHQRQGNNMATLRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS 182

Query: 217 SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV 276
           SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV
Sbjct: 183 SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV 242

Query: 277 REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 309
           REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD
Sbjct: 243 REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 280

[Close]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL
Match: A0A6J1IFG6 (RPM1-interacting protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473867 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.8e-142
Identity = 263/279 (94.27%), Postives = 263/279 (94.27%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 95
           M SLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ
Sbjct: 1   MASLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 60

Query: 96  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 155
           AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR
Sbjct: 61  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 120

Query: 156 SWKIHLSIHDSIQG------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL 215
           SW    S     QG      RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL
Sbjct: 121 SWVSFNSPLHQRQGNNMATLRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL 180

Query: 216 SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR 275
           SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR
Sbjct: 181 SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR 240

Query: 276 VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 309
           VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD
Sbjct: 241 VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 279

[Close]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL
Match: A0A6J1FJH8 (RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446298 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.0e-123
Identity = 233/277 (84.12%), Postives = 244/277 (88.09%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 95
           M SLQVPKFGKWDDGEDVPYTTYFDNATKA SERLNLNDP  +EEIS++ ETREGVVRRQ
Sbjct: 1   MASLQVPKFGKWDDGEDVPYTTYFDNATKAKSERLNLNDPSHREEISERQETREGVVRRQ 60

Query: 96  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 155
            ESPLHRDGSELPGQD+DSLKSTTSRGQQALRQKYTQE  SLEDGN KK L+SPLDH+TR
Sbjct: 61  TESPLHRDGSELPGQDHDSLKSTTSRGQQALRQKYTQEDLSLEDGNTKKRLQSPLDHRTR 120

Query: 156 SWKIHLSIHDSIQG---------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDR 215
               H+S +  +           RNGAASD NIENPSL TRQHPRTEAKSVVPSSPLRDR
Sbjct: 121 G---HVSFNSPLHQRQRNNTATVRNGAASDGNIENPSLQTRQHPRTEAKSVVPSSPLRDR 180

Query: 216 RGLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSI 275
           RG SS KGGCHDG+TPLTPGRSRQQSAPRG ETPDRSPTVPRFGDWDESDPTSSENYTSI
Sbjct: 181 RGSSSPKGGCHDGVTPLTPGRSRQQSAPRGIETPDRSPTVPRFGDWDESDPTSSENYTSI 240

Query: 276 FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENS+
Sbjct: 241 FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSK 274

[Close]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL
Match: A0A6J1FRS3 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446298 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.0e-123
Identity = 233/276 (84.42%), Postives = 244/276 (88.41%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 96
           QSLQVPKFGKWDDGEDVPYTTYFDNATKA SERLNLNDP  +EEIS++ ETREGVVRRQ 
Sbjct: 3   QSLQVPKFGKWDDGEDVPYTTYFDNATKAKSERLNLNDPSHREEISERQETREGVVRRQT 62

Query: 97  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 156
           ESPLHRDGSELPGQD+DSLKSTTSRGQQALRQKYTQE  SLEDGN KK L+SPLDH+TR 
Sbjct: 63  ESPLHRDGSELPGQDHDSLKSTTSRGQQALRQKYTQEDLSLEDGNTKKRLQSPLDHRTRG 122

Query: 157 WKIHLSIHDSIQG---------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRR 216
              H+S +  +           RNGAASD NIENPSL TRQHPRTEAKSVVPSSPLRDRR
Sbjct: 123 ---HVSFNSPLHQRQRNNTATVRNGAASDGNIENPSLQTRQHPRTEAKSVVPSSPLRDRR 182

Query: 217 GLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIF 276
           G SS KGGCHDG+TPLTPGRSRQQSAPRG ETPDRSPTVPRFGDWDESDPTSSENYTSIF
Sbjct: 183 GSSSPKGGCHDGVTPLTPGRSRQQSAPRGIETPDRSPTVPRFGDWDESDPTSSENYTSIF 242

Query: 277 TRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           TRVREERQTEEEGGFPVGTNISHADRRNRSDAENS+
Sbjct: 243 TRVREERQTEEEGGFPVGTNISHADRRNRSDAENSK 275

[Close]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL
Match: A0A0A0L7W9 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G130280 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 2.1e-84
Identity = 180/289 (62.28%), Postives = 212/289 (73.36%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPL-QQEEIS-------KQHETR 96
           +S QVPKFGKWDDG+DVPYTTYFDNATKA  ER+N ND L  +EEIS       +QH+ +
Sbjct: 3   RSSQVPKFGKWDDGDDVPYTTYFDNATKAKFERMNPNDSLPHREEISNTVRSNYEQHKIK 62

Query: 97  E-GVVRRQAESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLE 156
           E GVVRRQ ESPLH D  EL G+DY+ +KS  SRGQQ  R K+TQE   LED N KK L+
Sbjct: 63  EGGVVRRQPESPLHHDAPELSGRDYNGIKSAKSRGQQVSRPKHTQEDLGLEDSNMKKQLD 122

Query: 157 SPLDHQT-----------RSWKIHLSIHDSIQG--RNGAASDSNIENPSLHTRQHPRTEA 216
           SPLDH++           +    H S  +S +G  RNG  S+ +IEN  LH+RQHPRTEA
Sbjct: 123 SPLDHRSMGQVSLNSPLHQRQGNHSSTSNSSKGTMRNGTVSECSIENSPLHSRQHPRTEA 182

Query: 217 KSVVPSSPLRDRRGLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDE 276
           K+VVPSSPLR+RRG SS +G  H+G+ PLTPGRSRQQS PRGNETPDR  TVP+FGDWDE
Sbjct: 183 KTVVPSSPLRERRGSSSPRGSSHEGLAPLTPGRSRQQSVPRGNETPDRGATVPKFGDWDE 242

Query: 277 SDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           SDP+SSENYT+IFTRVR ERQT E+G  P GTN+S    R+RS AENS+
Sbjct: 243 SDPSSSENYTNIFTRVRVERQT-EDGSLPAGTNVSSI--RSRSSAENSK 288

[Close]

BLAST of CmaCh06G012380 vs. NCBI nr
Match: XP_022975004.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 514.2 bits (1323), Expect = 7.6e-142
Identity = 263/278 (94.60%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 96
           QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA
Sbjct: 3   QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 62

Query: 97  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 156
           ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS
Sbjct: 63  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 122

Query: 157 WKIHLSIHDSIQG------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS 216
           W    S     QG      RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS
Sbjct: 123 WVSFNSPLHQRQGNNMATLRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLS 182

Query: 217 SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV 276
           SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV
Sbjct: 183 SHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRV 242

Query: 277 REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 309
           REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD
Sbjct: 243 REERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 280

[Close]

BLAST of CmaCh06G012380 vs. NCBI nr
Match: XP_022975005.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 513.8 bits (1322), Expect = 1.0e-141
Identity = 263/279 (94.27%), Postives = 263/279 (94.27%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 95
           M SLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ
Sbjct: 1   MASLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 60

Query: 96  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 155
           AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR
Sbjct: 61  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 120

Query: 156 SWKIHLSIHDSIQG------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL 215
           SW    S     QG      RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL
Sbjct: 121 SWVSFNSPLHQRQGNNMATLRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGL 180

Query: 216 SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR 275
           SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR
Sbjct: 181 SSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTR 240

Query: 276 VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 309
           VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD
Sbjct: 241 VREERQTEEEGGFPVGTNISHADRRNRSDAENSRFSGGD 279

[Close]

BLAST of CmaCh06G012380 vs. NCBI nr
Match: XP_022940826.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 450.7 bits (1158), Expect = 1.0e-122
Identity = 233/277 (84.12%), Postives = 244/277 (88.09%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQ 95
           M SLQVPKFGKWDDGEDVPYTTYFDNATKA SERLNLNDP  +EEIS++ ETREGVVRRQ
Sbjct: 1   MASLQVPKFGKWDDGEDVPYTTYFDNATKAKSERLNLNDPSHREEISERQETREGVVRRQ 60

Query: 96  AESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTR 155
            ESPLHRDGSELPGQD+DSLKSTTSRGQQALRQKYTQE  SLEDGN KK L+SPLDH+TR
Sbjct: 61  TESPLHRDGSELPGQDHDSLKSTTSRGQQALRQKYTQEDLSLEDGNTKKRLQSPLDHRTR 120

Query: 156 SWKIHLSIHDSIQG---------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDR 215
               H+S +  +           RNGAASD NIENPSL TRQHPRTEAKSVVPSSPLRDR
Sbjct: 121 G---HVSFNSPLHQRQRNNTATVRNGAASDGNIENPSLQTRQHPRTEAKSVVPSSPLRDR 180

Query: 216 RGLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSI 275
           RG SS KGGCHDG+TPLTPGRSRQQSAPRG ETPDRSPTVPRFGDWDESDPTSSENYTSI
Sbjct: 181 RGSSSPKGGCHDGVTPLTPGRSRQQSAPRGIETPDRSPTVPRFGDWDESDPTSSENYTSI 240

Query: 276 FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENS+
Sbjct: 241 FTRVREERQTEEEGGFPVGTNISHADRRNRSDAENSK 274

[Close]

BLAST of CmaCh06G012380 vs. NCBI nr
Match: XP_022940820.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 450.7 bits (1158), Expect = 1.0e-122
Identity = 233/276 (84.42%), Postives = 244/276 (88.41%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 96
           QSLQVPKFGKWDDGEDVPYTTYFDNATKA SERLNLNDP  +EEIS++ ETREGVVRRQ 
Sbjct: 3   QSLQVPKFGKWDDGEDVPYTTYFDNATKAKSERLNLNDPSHREEISERQETREGVVRRQT 62

Query: 97  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 156
           ESPLHRDGSELPGQD+DSLKSTTSRGQQALRQKYTQE  SLEDGN KK L+SPLDH+TR 
Sbjct: 63  ESPLHRDGSELPGQDHDSLKSTTSRGQQALRQKYTQEDLSLEDGNTKKRLQSPLDHRTRG 122

Query: 157 WKIHLSIHDSIQG---------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRR 216
              H+S +  +           RNGAASD NIENPSL TRQHPRTEAKSVVPSSPLRDRR
Sbjct: 123 ---HVSFNSPLHQRQRNNTATVRNGAASDGNIENPSLQTRQHPRTEAKSVVPSSPLRDRR 182

Query: 217 GLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIF 276
           G SS KGGCHDG+TPLTPGRSRQQSAPRG ETPDRSPTVPRFGDWDESDPTSSENYTSIF
Sbjct: 183 GSSSPKGGCHDGVTPLTPGRSRQQSAPRGIETPDRSPTVPRFGDWDESDPTSSENYTSIF 242

Query: 277 TRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           TRVREERQTEEEGGFPVGTNISHADRRNRSDAENS+
Sbjct: 243 TRVREERQTEEEGGFPVGTNISHADRRNRSDAENSK 275

[Close]

BLAST of CmaCh06G012380 vs. NCBI nr
Match: KAG6597281.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.1 bits (1154), Expect = 3.0e-122
Identity = 233/276 (84.42%), Postives = 245/276 (88.77%), Query Frame = 0


Query: 37  QSLQVPKFGKWDDGEDVPYTTYFDNATKAISERLNLNDPLQQEEISKQHETREGVVRRQA 96
           QSLQVPKFGKWDDGEDVPYTTYFDNATKA SERLNLNDP  +EEIS++ ETREGVVRRQ 
Sbjct: 3   QSLQVPKFGKWDDGEDVPYTTYFDNATKAKSERLNLNDPSHREEISERQETREGVVRRQT 62

Query: 97  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDHQTRS 156
           ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQE  SLEDGN KK L+SPLDH+TR 
Sbjct: 63  ESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEDLSLEDGNTKKRLQSPLDHRTRG 122

Query: 157 WKIHLSIHDSI---QG------RNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRR 216
              H+S +  +   QG      RNGAASD NIENPSL TRQHPRTEAKS+VPSSPLRDRR
Sbjct: 123 ---HVSFNSPLHQHQGNNTATVRNGAASDGNIENPSLQTRQHPRTEAKSIVPSSPLRDRR 182

Query: 217 GLSSHKGGCHDGITPLTPGRSRQQSAPRGNETPDRSPTVPRFGDWDESDPTSSENYTSIF 276
           G SS KGGCHDG+TPLTPGRSRQQSAPRG ETPDRSPTVPRFGDWDESDPTSSENYTSIF
Sbjct: 183 GSSSPKGGCHDGVTPLTPGRSRQQSAPRGIETPDRSPTVPRFGDWDESDPTSSENYTSIF 242

Query: 277 TRVREERQTEEEGGFPVGTNISHADRRNRSDAENSR 304
           TRVREERQTEEEGGFPVGTNISHAD RNRS+AENS+
Sbjct: 243 TRVREERQTEEEGGFPVGTNISHADHRNRSNAENSK 275

[Close]

BLAST of CmaCh06G012380 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14
Identity = 75/262 (28.63%), Postives = 109/262 (41.60%), Query Frame = 0


Query: 36  MQSLQVPKFGKWDDGEDVPYTTYFDNATKAI---SERLNLNDPLQQEEISKQHETREGVV 95
           M    VPKFG W+  E+VPYT YFD A K     S+ +N NDP    +            
Sbjct: 1   MARSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD------------ 60

Query: 96  RRQAESPLHRDGSELPGQDYDSLKSTTSRGQQALRQKYTQEHSSLEDGNAKKHLESPLDH 155
             Q+++P H   S    +  D    T  R ++ +R +   E     D             
Sbjct: 61  -SQSQAPPHPPSSRTKPEQVD----TVRRSREHMRSREESELKQFGDAGG---------- 120

Query: 156 QTRSWKIHLSIHDSIQGRNGAASDSNIENPSLHTRQHPRTEAKSVVPSSPLRDRRGLSSH 215
                    S +++   R G AS +N                 S    SPL        H
Sbjct: 121 ---------SSNEAANKRQGRASQNN-----------------SYDNKSPL--------H 180

Query: 216 KGGCHDGITPLTPGRSRQQSAP-RGNETPDRSPTVPRFGDWDESDPTSSENYTSIFTRVR 275
           K   +DG      G+SR +    R +E+P++   VP+FGDWDE++P+S++ YT IF +VR
Sbjct: 181 KNS-YDG-----TGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVR 187

Query: 276 EERQTEEEGGFPVGTNISHADR 294
           EER +        G N+S + R
Sbjct: 241 EERSS--------GANVSGSSR 187

[Close]

BLAST of CmaCh06G012380 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-05
Identity = 19/50 (38.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 241 DRSPTVPRFGDWDESDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISH 291
           D+   +P+FG+WD +DP S+E +T IF + R+E++T  + G P  ++  H
Sbjct: 3   DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGH 52

[Close]

BLAST of CmaCh06G012380 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-05
Identity = 19/50 (38.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 241 DRSPTVPRFGDWDESDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISH 291
           D+   +P+FG+WD +DP S+E +T IF + R+E++T  + G P  ++  H
Sbjct: 19  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGH 68

[Close]

BLAST of CmaCh06G012380 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 7.2e-05
Identity = 19/50 (38.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 241 DRSPTVPRFGDWDESDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISH 291
           D+   +P+FG+WD +DP S+E +T IF + R+E++T  + G P  ++  H
Sbjct: 19  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGH 68

[Close]

BLAST of CmaCh06G012380 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.6e-04
Identity = 20/65 (30.77%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 241 DRSPTVPRFGDWDESDPTSSENYTSIFTRVREERQTEEEGGFPVGTNISHADRRNRSDAE 300
           ++   +P+FG+WD ++P S+E +T IF++  +E++T++  G   G N   + +RN++  +
Sbjct: 4   NKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASG--AGPNSLVSPQRNQNSDQ 63

Query: 301 NSRFS 306
           N+  S
Sbjct: 64  NNNHS 66

The following BLAST results are available for this feature:

BLAST of CmaCh06G012380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	4.1e-13	28.63	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CmaCh06G012380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJ64	3.7e-142	94.60	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IFG6	4.8e-142	94.27	RPM1-interacting protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FJH8	5.0e-123	84.12	RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FRS3	5.0e-123	84.42	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0L7W9	2.1e-84	62.28	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G13...	[more]

BLAST of CmaCh06G012380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975004.1	7.6e-142	94.60	RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima]	[more]
XP_022975005.1	1.0e-141	94.27	RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima]	[more]
XP_022940826.1	1.0e-122	84.12	RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata]	[more]
XP_022940820.1	1.0e-122	84.42	RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata]	[more]
KAG6597281.1	3.0e-122	84.42	RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh06G012380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	2.9e-14	28.63	RPM1 interacting protein 4	[more]
AT5G55850.1	7.2e-05	38.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	7.2e-05	38.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	7.2e-05	38.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	3.6e-04	30.77	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 240..276 e-value: 3.3E-16 score: 58.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	PANTHER	PTHR33159:SF6	RPM1-INTERACTING PROTEIN 4	coord: 36..302
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 36..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G012380.1	CmaCh06G012380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane