CmaCh06G012360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCACCACGCGCTCATCGTCTCCCCTCTGGGTAGCCCTAATTGGTTCGGACTCTCAGCTCAGTTCTCCTCTGATCGCTTCGCACCATTGACAGAAAGACCTCAGGAATTTGAATTTCAAGCTCCCAACAATGGCTCTTCTCTAGCTTAGATCCATCTCGGAAGGGTTAGCAGTTTCTTCAGCCTCTAGCATTTTTGTTATTCGTTCGGTTTTGAAGTTTTTGGTTTTGAATTTGCCTTTTTAGGTTATTTAGTTGGATTTCTCCTCGATTTTCATGTCTAGAGAGTATAAAGTTCTGTTTGTTTCACGAATTGCTCGAGAAATTCGCGATGAAAAAATGGACGAAATGGAAAAAGTTCAACGTAGTTTTAAATTTGCTTCAGAAAACGTTGCCATTTGTGTCGTTGTGTTCAAGTTAGTTTACTTTTGACGCTCGTATTCGCGACATGAAGAATTTAGGAAGCGATTCATGAAAGCTGCAATTCGTTTCTTAGCTTGGTGCGAGCTATGTTTGGCGGTTTCTGCTATTTGAAGTAAAATTCGAAAGATGGAGTTGGATTTTTTTGACATTGTCGTTTACTTGACTAAGGAATGAAGGAAGGTGGAAAGCCTCTTTCTGTAGGTCTTTCATATCTGCATGTTGTTTTCAGTTGGTTTGCTAGTCTATTCTCGTCATCATCCACGCATTTTCTGTCATGAATTTGATCAATCAAGCTTGTAGTTCTACAATTCTTTGATAATTCAGCCAATTTTTCGCATTAAATACATATTTCATTCAGAATGTTACAGTATTTGCTTGGGATGAATATGAAATAGTTTCTACTTTGACTTGTGTGTGTGTGTTTTCATCATTTATGCACTGACTTACTACTTATTAAATAACACGATTGCAGGTTCGTAAATTCTGAACCATCCTAGTAGCAGGCAATTCAAGTATTATCGAGCATACTTAATCGTAGAATGGCAGAAACAATATCTAGTTTCTGGGGTCCTGTTACATCTCCTGAATGGTGTGAAAAGAACTATGTCTACTCTTCTTATATTGCAGAATTCTTCAACACGGTATCAAATATTCCATGCCTCATTTTAGCATTTGTTGGTCTCGTAAATGCTTTGAGACAAAGGTTCGAGAAGAGGTTTAGCGTTCTTCACATATCAAATATGATCCTTGCCATAGGAAGCATGTTGTATCATGCGACCTTGCAACGAGTGTAAGTTTTCTTCCTTTATATTAAAGAGTAAAAGAATAAAGATGACATATGTGAGTCGAAGTGTTTAAGTTCGATGTACAAATTAGAGTTTGTGAGTCAGAAAATATTTAAGCGACCTATATAAGATAGATCCCATGAGTGATTGAAATACTAAATGTCGTGGCATGAGATGTATGAGAAGAAATAGCTTGGATAGAGGAAAATATGGGTAAACCTTAGCTTTATCCTCGTCCACGATAATGGAATTTTCTTTTAGAACTTTTCGGCTTTGAGGGAAAGCAAGGAGGAAACTGCTAAATAGATGATAACTAGTTTTTTAAGGAAATTTTTTGTTTGTTTTCTCAATTGCATAACGACCAAAAAATGAACTATGCTGTTCGGTTTTCTTTGTGCTCATCTTAGAAGTTAGAATCGTCTCATTTTTTCATTAATAAGTGGAATTTATTCTCTCATGGATGAATTTTCTAGTCCTCCTCTCATCCCTGATTTTTTATATTCGTCTTAGCATTAGGAGTTGCAACGTTTTACATTTTATTCCCCCCTCTAGCCGAGGTTCGGTACATGTATTGAAGATTTCCCTGTGAGATTATTTTTTCTGAACTTCAATAGTTTTTAGCAAATGTATACTGTTTTTAGCATTGGGTTGCATGTTCTGTCAAATCTTCATCTATTATAAAGTATCTTATCTATTGGATTCAATGATAAAACTTATTTTCAGACAACAGCAAGGTGATGAAACACCAATGGTATGGGAAATGCTCCTCTATATCTACATCCTTTATTCACCAGATTGGCATTACCGGAGCACGATGCCTACGTTCTTGTTTCTCTACGGTGCTGCCTTTGCTGTTGCTCATGCAATCATACGTTTTGGAGCGGGCTTCAAGGTACATTATGCAATACTATGTCTTATCTGCATCCCTAGAATGTACAAGTATTATATTCACACGAACGATGTACACGCAAAGCGGCTGGCAAAGTTATACTTGACAACCATCTCGCTCGGGACTGTTTTCTGGCTTTTTGATTGCTTGTACTGCAGGAATATCTCTAGCTGGTATTTCAACCCTCAGGGTCATGCATTGTGGCATTTATTTATGGGGTTCAATTCTTATTTCGCAAATACATTTTTAATGTTTTGTCGTGCTCAACAACTCGAGTGGAACCCGAGCGTAGTTCACTTTTTGGGATTGTTTCCATACGTGAAGATTCAAAAACCAAAGAGCCAGTGATCGAAGTCGGATTAGGTCTTGGATTGGAAGGAAAACAACATTCTTTTTATCTTGAAATGGATTTTTGGTTTTGGCTGGCTATAATCAGTAGGATTAGACATTCTTTTTATCCCTTGCTCATATGGATGTAAATCATACTCAGAATGGCTGTCGTTGCTTTAGATTGGGTTTTACTGCAGCTGTAAAATTGTGTTTTACCTTCGGTTAATTTTACTGTTTTCGAGTTTTTACTGTTCTTATAGAAATTGGCTTATATGGAATTTCACAGATTTGCTCTATAGAATTGTCTTTAGAGCAGTTGTTGTTTTAGTGACACAGCTTTGAGAATCAATTAGTTCATTACATATCAACTCCTGTTGGAGTGCAAATTTCAT ATGTCTTCACCACGCGCTCATCGTCTCCCCTCTGGGTAGCCCTAATTGGTTCGGACTCTCAGCTCAGTTCTCCTCTGATCGCTTCGCACCATTGACAGAAAGACCTCAGGAATTTGAATTTCAAGCTCCCAACAATGGCTCTTCTCTAGCTTAGATCCATCTCGGAAGGGTTCGTAAATTCTGAACCATCCTAGTAGCAGGCAATTCAAGTATTATCGAGCATACTTAATCGTAGAATGGCAGAAACAATATCTAGTTTCTGGGGTCCTGTTACATCTCCTGAATGGTGTGAAAAGAACTATGTCTACTCTTCTTATATTGCAGAATTCTTCAACACGGTATCAAATATTCCATGCCTCATTTTAGCATTTGTTGGTCTCGTAAATGCTTTGAGACAAAGGTTCGAGAAGAGGTTTAGCGTTCTTCACATATCAAATATGATCCTTGCCATAGGAAGCATGTTGTATCATGCGACCTTGCAACGAGTACAACAGCAAGGTGATGAAACACCAATGGTATGGGAAATGCTCCTCTATATCTACATCCTTTATTCACCAGATTGGCATTACCGGAGCACGATGCCTACGTTCTTGTTTCTCTACGGTGCTGCCTTTGCTGTTGCTCATGCAATCATACGTTTTGGAGCGGGCTTCAAGGTACATTATGCAATACTATGTCTTATCTGCATCCCTAGAATGTACAAGTATTATATTCACACGAACGATGTACACGCAAAGCGGCTGGCAAAGTTATACTTGACAACCATCTCGCTCGGGACTGTTTTCTGGCTTTTTGATTGCTTGTACTGCAGGAATATCTCTAGCTGGTATTTCAACCCTCAGGGTCATGCATTGTGGCATTTATTTATGGGGTTCAATTCTTATTTCGCAAATACATTTTTAATGTTTTGTCGTGCTCAACAACTCGAGTGGAACCCGAGCGTAGTTCACTTTTTGGGATTGTTTCCATACGTGAAGATTCAAAAACCAAAGAGCCAGTGATCGAAGTCGGATTAGGTCTTGGATTGGAAGGAAAACAACATTCTTTTTATCTTGAAATGGATTTTTGGTTTTGGCTGGCTATAATCAGTAGGATTAGACATTCTTTTTATCCCTTGCTCATATGGATGTAAATCATACTCAGAATGGCTGTCGTTGCTTTAGATTGGGTTTTACTGCAGCTGTAAAATTGTGTTTTACCTTCGGTTAATTTTACTGTTTTCGAGTTTTTACTGTTCTTATAGAAATTGGCTTATATGGAATTTCACAGATTTGCTCTATAGAATTGTCTTTAGAGCAGTTGTTGTTTTAGTGACACAGCTTTGAGAATCAATTAGTTCATTACATATCAACTCCTGTTGGAGTGCAAATTTCAT ATGGCAGAAACAATATCTAGTTTCTGGGGTCCTGTTACATCTCCTGAATGGTGTGAAAAGAACTATGTCTACTCTTCTTATATTGCAGAATTCTTCAACACGGTATCAAATATTCCATGCCTCATTTTAGCATTTGTTGGTCTCGTAAATGCTTTGAGACAAAGGTTCGAGAAGAGGTTTAGCGTTCTTCACATATCAAATATGATCCTTGCCATAGGAAGCATGTTGTATCATGCGACCTTGCAACGAGTACAACAGCAAGGTGATGAAACACCAATGGTATGGGAAATGCTCCTCTATATCTACATCCTTTATTCACCAGATTGGCATTACCGGAGCACGATGCCTACGTTCTTGTTTCTCTACGGTGCTGCCTTTGCTGTTGCTCATGCAATCATACGTTTTGGAGCGGGCTTCAAGGTACATTATGCAATACTATGTCTTATCTGCATCCCTAGAATGTACAAGTATTATATTCACACGAACGATGTACACGCAAAGCGGCTGGCAAAGTTATACTTGACAACCATCTCGCTCGGGACTGTTTTCTGGCTTTTTGATTGCTTGTACTGCAGGAATATCTCTAGCTGGTATTTCAACCCTCAGGGTCATGCATTGTGGCATTTATTTATGGGGTTCAATTCTTATTTCGCAAATACATTTTTAATGTTTTGTCGTGCTCAACAACTCGAGTGGAACCCGAGCGTAGTTCACTTTTTGGGATTGTTTCCATACGTGAAGATTCAAAAACCAAAGAGCCAGTGA MAETISSFWGPVTSPEWCEKNYVYSSYIAEFFNTVSNIPCLILAFVGLVNALRQRFEKRFSVLHISNMILAIGSMLYHATLQRVQQQGDETPMVWEMLLYIYILYSPDWHYRSTMPTFLFLYGAAFAVAHAIIRFGAGFKVHYAILCLICIPRMYKYYIHTNDVHAKRLAKLYLTTISLGTVFWLFDCLYCRNISSWYFNPQGHALWHLFMGFNSYFANTFLMFCRAQQLEWNPSVVHFLGLFPYVKIQKPKSQ Homology
BLAST of CmaCh06G012360 vs. ExPASy Swiss-Prot
Match: Q94IB9 (Alkaline ceramidase OS=Arabidopsis thaliana OX=3702 GN=ACER PE=2 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 1.8e-115 Identity = 194/255 (76.08%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy Swiss-Prot
Match: Q9D099 (Alkaline ceramidase 3 OS=Mus musculus OX=10090 GN=Acer3 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.7e-26 Identity = 73/258 (28.29%), Postives = 124/258 (48.06%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy Swiss-Prot
Match: Q9NUN7 (Alkaline ceramidase 3 OS=Homo sapiens OX=9606 GN=ACER3 PE=1 SV=3) HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23 Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy Swiss-Prot
Match: Q02896 (Alkaline ceramidase YDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YDC1 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.8e-17 Identity = 78/278 (28.06%), Postives = 127/278 (45.68%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy Swiss-Prot
Match: Q6TMJ1 (Putative alkaline ceramidase dcd3A OS=Dictyostelium discoideum OX=44689 GN=dcd3A PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15 Identity = 71/278 (25.54%), Postives = 118/278 (42.45%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy TrEMBL
Match: A0A6J1ICY0 (alkaline ceramidase-like OS=Cucurbita maxima OX=3661 GN=LOC111473853 PE=3 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 4.9e-148 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy TrEMBL
Match: A0A6J1FQF1 (alkaline ceramidase-like OS=Cucurbita moschata OX=3662 GN=LOC111446309 PE=3 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 5.4e-147 Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy TrEMBL
Match: A0A0A0L9D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130320 PE=3 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 8.9e-142 Identity = 242/254 (95.28%), Postives = 248/254 (97.64%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy TrEMBL
Match: A0A6J1CZW2 (alkaline ceramidase-like OS=Momordica charantia OX=3673 GN=LOC111016080 PE=3 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 3.4e-141 Identity = 240/254 (94.49%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of CmaCh06G012360 vs. ExPASy TrEMBL
Match: A0A1S3AWT6 (alkaline ceramidase 3-like OS=Cucumis melo OX=3656 GN=LOC103483475 PE=3 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 4.4e-141 Identity = 241/254 (94.88%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of CmaCh06G012360 vs. NCBI nr
Match: XP_022974986.1 (alkaline ceramidase-like [Cucurbita maxima] >XP_022974987.1 alkaline ceramidase-like [Cucurbita maxima]) HSP 1 Score: 533.5 bits (1373), Expect = 1.0e-147 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CmaCh06G012360 vs. NCBI nr
Match: XP_022940838.1 (alkaline ceramidase-like [Cucurbita moschata] >XP_022940846.1 alkaline ceramidase-like [Cucurbita moschata] >XP_023540906.1 alkaline ceramidase-like [Cucurbita pepo subsp. pepo] >XP_023540907.1 alkaline ceramidase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 530.0 bits (1364), Expect = 1.1e-146 Identity = 252/254 (99.21%), Postives = 253/254 (99.61%), Query Frame = 0
BLAST of CmaCh06G012360 vs. NCBI nr
Match: XP_004133990.1 (alkaline ceramidase [Cucumis sativus] >KGN56726.1 hypothetical protein Csa_011026 [Cucumis sativus]) HSP 1 Score: 512.7 bits (1319), Expect = 1.8e-141 Identity = 242/254 (95.28%), Postives = 248/254 (97.64%), Query Frame = 0
BLAST of CmaCh06G012360 vs. NCBI nr
Match: XP_038892232.1 (alkaline ceramidase-like isoform X1 [Benincasa hispida] >XP_038892241.1 alkaline ceramidase-like isoform X1 [Benincasa hispida]) HSP 1 Score: 512.3 bits (1318), Expect = 2.4e-141 Identity = 242/254 (95.28%), Postives = 248/254 (97.64%), Query Frame = 0
BLAST of CmaCh06G012360 vs. NCBI nr
Match: XP_022147049.1 (alkaline ceramidase-like [Momordica charantia]) HSP 1 Score: 510.8 bits (1314), Expect = 7.0e-141 Identity = 240/254 (94.49%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of CmaCh06G012360 vs. TAIR 10
Match: AT4G22330.1 (Alkaline phytoceramidase (aPHC) ) HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-116 Identity = 194/255 (76.08%), Postives = 220/255 (86.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|