CmaCh06G012340 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAATCGGAGTTGAGAGCGATGTACGGAAGACCATCCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCACAGCCACAAGCGCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCGTCCGGCGGGTTTATTCCTGGTCATCAGAACGTCAACTTCCCTATGCAGAACTCGAACTTGCCGACACAAAATCACGGTTTTCAGTTTTCACAAGCCCCCAATCCAGGTTTCCATTCTCCACAACCTCCCAATACGGGTTCCCAGGCGCATGGTAAGACTACGATGCCAGCAGAAGGCGTCACGAGGATCAACAACGCTGTGGCCAAAGCACACAGCGATCTTCTTGTGGCTAAGGAAAGCATCTCAGCGTGGAAGGTCTCGCAATCAGCGCTTTCAATTCTCCAGGTTGATTCATGGGATTCTTTAGGGGTTCGTATGCAGGAAATCGACGCTCTTCACCGCCTCATTGCGATGGAAGGAAAGGTAACGCGAGAAAATACGTCCTAAACTTCAATCCCCCTCTCTTTTGTTTGATTATCTGATAATTATGGGAATAGAGTATATTTTAAGCATGGATTCTCTGGGATCTTGAGTGGACTAGAATAATAAGCATTGGCCTACTAGGGCCTTTATCTAGAAGGAAACTCATCCTGGTAG CTAATCGGAGTTGAGAGCGATGTACGGAAGACCATCCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCACAGCCACAAGCGCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCGTCCGGCGGGTTTATTCCTGGTCATCAGAACGTCAACTTCCCTATGCAGAACTCGAACTTGCCGACACAAAATCACGGTTTTCAGTTTTCACAAGCCCCCAATCCAGGTTTCCATTCTCCACAACCTCCCAATACGGGTTCCCAGGCGCATGGTAAGACTACGATGCCAGCAGAAGGCGTCACGAGGATCAACAACGCTGTGGCCAAAGCACACAGCGATCTTCTTGTGGCTAAGGAAAGCATCTCAGCGTGGAAGGTCTCGCAATCAGCGCTTTCAATTCTCCAGGTTGATTCATGGGATTCTTTAGGGGTTCGTATGCAGGAAATCGACGCTCTTCACCGCCTCATTGCGATGGAAGGAAAGGGCCTTTATCTAGAAGGAAACTCATCCTGGTAG CTAATCGGAGTTGAGAGCGATGTACGGAAGACCATCCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCGTTTCGCTCCTTCCGGCGCCGGTCGACGGCACTCCCAGCCGCAGCAGCAGCAACCGTGGCCGCAGCCACAGCCACAAGCGCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCAGTTTCCTGCAGCGCCTTTTTTTAATCCCAATGTTCAGCTTGAAGCCCTTAATCATATTCTCCAATCGTCCGGCGGGTTTATTCCTGGTCATCAGAACGTCAACTTCCCTATGCAGAACTCGAACTTGCCGACACAAAATCACGGTTTTCAGTTTTCACAAGCCCCCAATCCAGGTTTCCATTCTCCACAACCTCCCAATACGGGTTCCCAGGCGCATGGTAAGACTACGATGCCAGCAGAAGGCGTCACGAGGATCAACAACGCTGTGGCCAAAGCACACAGCGATCTTCTTGTGGCTAAGGAAAGCATCTCAGCGTGGAAGGTCTCGCAATCAGCGCTTTCAATTCTCCAGGTTGATTCATGGGATTCTTTAGGGGTTCGTATGCAGGAAATCGACGCTCTTCACCGCCTCATTGCGATGGAAGGAAAGGGCCTTTATCTAGAAGGAAACTCATCCTGGTAG LIGVESDVRKTIPFRSFRRRSTALPAAAAATVAAAVSLLPAPVDGTPSRSSSNRGRSHSHKRSFLQRLFLIPMFSLKPLIIFSNQFPAAPFFNPNVQLEALNHILQSSGGFIPGHQNVNFPMQNSNLPTQNHGFQFSQAPNPGFHSPQPPNTGSQAHGKTTMPAEGVTRINNAVAKAHSDLLVAKESISAWKVSQSALSILQVDSWDSLGVRMQEIDALHRLIAMEGKGLYLEGNSSW Homology
BLAST of CmaCh06G012340 vs. ExPASy Swiss-Prot
Match: F4JTS8 (Protein NO VEIN OS=Arabidopsis thaliana OX=3702 GN=NOV PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.8e-08 Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy Swiss-Prot
Match: A0A1P8ARG1 (Protein NO VEIN-LIKE OS=Arabidopsis thaliana OX=3702 GN=NVL PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy TrEMBL
Match: A0A6J1IHX9 (uncharacterized protein LOC111473852 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473852 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 8.8e-75 Identity = 155/185 (83.78%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy TrEMBL
Match: A0A6J1FJE1 (uncharacterized protein LOC111446266 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446266 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 4.8e-73 Identity = 152/185 (82.16%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy TrEMBL
Match: A0A6J1FQ82 (uncharacterized protein LOC111446266 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446266 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 1.3e-70 Identity = 152/195 (77.95%), Postives = 157/195 (80.51%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy TrEMBL
Match: A0A6J1E990 (uncharacterized protein LOC111431955 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431955 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50 Identity = 107/144 (74.31%), Postives = 115/144 (79.86%), Query Frame = 0
BLAST of CmaCh06G012340 vs. ExPASy TrEMBL
Match: A0A6J1CZA6 (uncharacterized protein LOC111016138 OS=Momordica charantia OX=3673 GN=LOC111016138 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.7e-41 Identity = 104/180 (57.78%), Postives = 115/180 (63.89%), Query Frame = 0
BLAST of CmaCh06G012340 vs. NCBI nr
Match: XP_022974983.1 (uncharacterized protein LOC111473852 isoform X1 [Cucurbita maxima] >XP_022974984.1 uncharacterized protein LOC111473852 isoform X1 [Cucurbita maxima] >XP_022974985.1 uncharacterized protein LOC111473852 isoform X2 [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 1.8e-74 Identity = 155/185 (83.78%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of CmaCh06G012340 vs. NCBI nr
Match: XP_022940776.1 (uncharacterized protein LOC111446266 isoform X2 [Cucurbita moschata]) HSP 1 Score: 284.3 bits (726), Expect = 9.9e-73 Identity = 152/185 (82.16%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of CmaCh06G012340 vs. NCBI nr
Match: XP_023539694.1 (uncharacterized protein LOC111800299 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 3.2e-71 Identity = 143/154 (92.86%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CmaCh06G012340 vs. NCBI nr
Match: KAG7028754.1 (hypothetical protein SDJN02_09935, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-70 Identity = 152/195 (77.95%), Postives = 157/195 (80.51%), Query Frame = 0
BLAST of CmaCh06G012340 vs. NCBI nr
Match: XP_022940768.1 (uncharacterized protein LOC111446266 isoform X1 [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-70 Identity = 152/195 (77.95%), Postives = 157/195 (80.51%), Query Frame = 0
BLAST of CmaCh06G012340 vs. TAIR 10
Match: AT4G13750.1 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein ) HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09 Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CmaCh06G012340 vs. TAIR 10
Match: AT1G08300.1 (no vein-like ) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-08 Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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