CmaCh06G011800 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCCCTCTCCCAGTTCTTTCCCGCCTCTGTAACTCGCCGTCCGCCGCGTAATCTCCGATCAACCTCCGGGTTGAATGTAAGTGAAAAGCTCTTTGATGCTGCGCTGCCTTACAATGTTTGTCAATGTGCGTCGCCTACAGAAATCTTTTATGGTGCATTACTGCATTGGTCTTCTTCTTTGAGTTCACCCCAAACCACATTCCCCAAGTTTATAAATGAGTATTGTTCGTCGTCTTCTTCGGATTTGGATAGTCTTGCTTTTGATTACGTAGTTCAATTTTTGCCTTCCAACGACGGTACTTTGAGATTCATCTCTGTGAGTTCAGTGACAGTAGGGTCACTATTAGGTTATCCAAAGCGATTAAGCTGTATAGGGTTTGAAGATACTTTTGAGGAATTTATACCCTGTTTTTTTTGTCAAGATTATGAAATTGTTTGAATGTTGAGGAACCGCGTTTGCGTTCTTTAAGCTGGCATTTAAGGATGACTGTGAAGGAACTGTTAGGTCTTGTTGTGTTGTGTTGTAGGGAAGTTGTTTAGGTATGTGGTTCGAAAGGGACCTCTCCCTCATAATTATATGTTTAACATAATGATTCTTGGGTTTTGTAGAAAGGTTGGAGCATGTGACGAGCAAATTTAGCTGTGAACCAGATGTTTATTCGCATAATTCTGTGATAAATGCAAACTGCTTAAAAGGGCAGTCATCACAGGCACTTCACTGGGTGAATTTGATGATCGCAAATGGCTGTAAATCTAGTATTGCTACAATCAGTTCCGTCATTGATGCCTTCTGCAGGGGGGGGGGGGGGGNGAAATTTTTTGTTGAAATTGTAGATATGTGGATCAATTATTAAGGGATATATCTGTATCTGGTTTGCTTAACGATTCTTCACTATGTCATGTAACTGTCTCAGGACTGTGCATGGGCTGGTAGATACGATGAAACCATGATGTTTTTAGAGGATTTACTCGAGAAAGGATTTCCTCCAACTGGTTGCTTTTAATTCCATTCTTGCAGAATGCGGCAGTGCAAGTTTAGAAGAGAGAGCATTTTATGCTTATGGTACAGTGGCGAATTTGGTTTAA ATGGTATCCCTCTCCCAGTTCTTTCCCGCCTCTGTAACTCGCCGTCCGCCGCGTAATCTCCGATCAACCTCCGGGTTGAATGTAAGTGAAAAGCTCTTTGATGCTGCGCTGCCTTACAATGTTTGTCAATGTGCGTCGCCTACAGAAATCTTTTATGGTGCATTACTGCATTGGTCTTCTTCTTTGAGTTCACCCCAAACCACATTCCCCAAGTTTATAAATGAGTATTGTTCGTCGTCTTCTTCGGATTTGGATAGTCTTGCTTTTGATTACGTAGTTCAATTTTTGCCTTCCAACGACGGTACTTTGAGATTCATCTCTGTGAGTTCAGTGACAGGAAGTTGTTTAGAAAGGTTGGAGCATGTGACGAGCAAATTTAGCTGTGAACCAGATGTTTATTCGCATAATTCTGTGATAAATGCAAACTGCTTAAAAGGGCAGTCATCACAGGCACTTCACTGGGTGAATTTGATGATCGCAAATGGCTAATGCGGCAGTGCAAGTTTAGAAGAGAGAGCATTTTATGCTTATGGTACAGTGGCGAATTTGGTTTAA ATGGTATCCCTCTCCCAGTTCTTTCCCGCCTCTGTAACTCGCCGTCCGCCGCGTAATCTCCGATCAACCTCCGGGTTGAATGTAAGTGAAAAGCTCTTTGATGCTGCGCTGCCTTACAATGTTTGTCAATGTGCGTCGCCTACAGAAATCTTTTATGGTGCATTACTGCATTGGTCTTCTTCTTTGAGTTCACCCCAAACCACATTCCCCAAGTTTATAAATGAGTATTGTTCGTCGTCTTCTTCGGATTTGGATAGTCTTGCTTTTGATTACGTAGTTCAATTTTTGCCTTCCAACGACGGTACTTTGAGATTCATCTCTGTGAGTTCAGTGACAGGAAGTTGTTTAGAAAGGTTGGAGCATGTGACGAGCAAATTTAGCTGTGAACCAGATGTTTATTCGCATAATTCTGTGATAAATGCAAACTGCTTAAAAGGGCAGTCATCACAGGCACTTCACTGGGTGAATTTGATGATCGCAAATGGCTAA MVSLSQFFPASVTRRPPRNLRSTSGLNVSEKLFDAALPYNVCQCASPTEIFYGALLHWSSSLSSPQTTFPKFINEYCSSSSSDLDSLAFDYVVQFLPSNDGTLRFISVSSVTGSCLERLEHVTSKFSCEPDVYSHNSVINANCLKGQSSQALHWVNLMIANG Homology
BLAST of CmaCh06G011800 vs. ExPASy TrEMBL
Match: A0A6J1IER3 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111473475 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.6e-40 Identity = 98/162 (60.49%), Postives = 98/162 (60.49%), Query Frame = 0
BLAST of CmaCh06G011800 vs. ExPASy TrEMBL
Match: A0A0A0L7U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128950 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13 Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmaCh06G011800 vs. ExPASy TrEMBL
Match: A0A0A0L7U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128950 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 8.8e-10 Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0
HSP 2 Score: 83.2 bits (204), Expect = 1.1e-12 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmaCh06G011800 vs. ExPASy TrEMBL
Match: A0A6J1IVM8 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111479659 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.6e-11 Identity = 36/46 (78.26%), Postives = 38/46 (82.61%), Query Frame = 0
HSP 2 Score: 83.2 bits (204), Expect = 1.1e-12 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmaCh06G011800 vs. ExPASy TrEMBL
Match: A0A6J1E9F2 (pentatricopeptide repeat-containing protein At5g39710-like OS=Cucurbita moschata OX=3662 GN=LOC111431987 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.0e-10 Identity = 34/46 (73.91%), Postives = 37/46 (80.43%), Query Frame = 0
HSP 2 Score: 77.8 bits (190), Expect = 4.6e-11 Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of CmaCh06G011800 vs. NCBI nr
Match: XP_022974740.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 175.6 bits (444), Expect = 3.4e-40 Identity = 98/162 (60.49%), Postives = 98/162 (60.49%), Query Frame = 0
BLAST of CmaCh06G011800 vs. NCBI nr
Match: KAG6597254.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33 Identity = 87/160 (54.37%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of CmaCh06G011800 vs. NCBI nr
Match: KAG7028723.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33 Identity = 87/160 (54.37%), Postives = 90/160 (56.25%), Query Frame = 0
BLAST of CmaCh06G011800 vs. NCBI nr
Match: XP_031738963.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8650288.1 hypothetical protein Csa_011189 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13 Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmaCh06G011800 vs. NCBI nr
Match: XP_031738963.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8650288.1 hypothetical protein Csa_011189 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 1.8e-09 Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0
HSP 2 Score: 83.2 bits (204), Expect = 2.3e-12 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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