CmaCh06G011580 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G011580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	light-mediated development protein DET1
Location	Cma_Chr06: 7801120 .. 7807345 (+)
RNA-Seq Expression	CmaCh06G011580
Synteny	CmaCh06G011580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGATTCCATCGCCAAACCTCTCTTTCAGTAACCTAAACCCTCGCCCAGTTCTCTCTCCGTTCTATTACTCGTCTTCGTTCGTCGAAATCCGCTAGTGCTTCTCTGCAATCTGAGCCACTCCAATAAAGTGTTTCTCTCTCCGTTCGATTACTCGACTTCGGTCATGAAATCTGCATGAATTTTTCTTCAATCTGAGCCACTTCAATTAAGTAATGTATAGAAGCAACAATGTGGCTGCTAGGATCTTCGATCGCCAAATCGCCACTCCTCCTCCTGGAACCAGCGTAAGAACTACGATTCTTGTACATGCTTTTTGTTTTGATCGTTTTCTTTATTCTCGTTCGTCTTAATTTTTGCGGCTTTGTTTTTGTAGTTTCATTGTGTTAGGCGATTCTATGAGAATATAGTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCGTATATAGTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCGTTGACGGTCAATACCTAATTACGTTCAGCAGGAATCATCGCGATTTAAATGTTTACCGCCCAAAATGGCTCTCGTTTTCTTACAAAGGAGATGAAATTGATACGTTTCTAGACTTTCCTTCCAATGCTCAAATGGCTCTCGTTTTCTTACAAAGGAGATGAAATTGATACGTTTCTAGACTTTCCTTCCAATGCTCAGAAGTTTGAGAGCTTTTTCAACCTGATTTATTCCGTCTCCCTTGCGTCCTGCAACGAGCTTATCTGTAAGGACTTCTTTATTTACATGGAGAGTAACCGATTTGGGCTTTTTGCTACCTCCACTGCTCAAATCCAAGATGCTCCGGCCGTCGGTGGTGCTGTTCCGGGAATTCCTTCTATAGACAAGATTACGTTTCATCTCCTGAGGTGAGTACCTTTTTCTTTATGTATTACGGTTTGATATAATTTGTTGATAGTGTTTTTTACGGAGTTTCTCTCTGTATTCTAACTTCCAAACATGTGATAGACTAGAGGATGGAGAAATTCTTGACGCGAAGGTGTTTGTCAACGATTTTGTGAATTTGGCTCACAATACGGGCGTCTTTCTCTACGATGATCTATTGGCGATTGTATCGGTACGCTACCAGATTATACATATTCTTCAAATTAGAGATTCCGGCCACCTTGTTGATGTACGAGCTCTAGGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGTAACATTTCTAGGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGTAACATTATGGTTCATGCTTCTTCAGTAGTACTAATTGCTCCGCTCTATATGAATATTTGCATTTGTCTAGTTGAAAGATAATATTTAACCTGTAAACCTTCTCTATGGTTTACGCTTCTTCGTGTATTTGTCTTCCGTCGGCGGATGTTATATACTGTTGGTCAATTTATCATCTGATTTCTGTTCCTTCGATTTTGTAGCTTTCTAGAGGCGCTTCCTGTATCAGCTGCATGTTTCTGTTCTGGATTGTGCATGTTTGGCTGCTTTTTAGTCTCTTCCCTATATTTTTATTCCGAAGATGATGAACTTCTCATTTTCTAGCGCTCAGGCGAGTTAAATCACCTACTTACATTCTGGCTCATGCTTCCTCCAGTTGTCTAGGGACTGAAGTTTCAGAAGAACATAATTCTTAATTAGACTTGCTTTGTTTATTTGAACGTATTCTTTGACTAGATAAAAAACAATAAAGAAATGTTAATCATCATCGTTCATGTTTCCTGTTATTAGCATCTCTCTTCGTGTACTTGTATTCTGTGGAAATTTGAACCGTTTCTTCACTTATGTAATTTTCTGGAAGCACTGCAGTCGTATAGGTCTCAAATTGTGCATGTTGGACTGCTGTTTAGTCTCTTTGCTAATTTTTTTGGACCTGGTTGAGTTGCTGCTCGTAGCTCATTAGCATTCATATGATAGTTTATGCCTGCTACTTAGCGACTCCATTAACTGAGTTCACCCTTCCCTCGGTGTATGTATGTCATTTGTTCCTACATTCCATCCATGGAACAATTGCATATGAATTTTCAACTTATTAATGACAGTATGTGGGGGTAGCTGAAAGAAGCAGATTGCTTGCGGGTGATGTTGAGAATGGCTACCATCATAGCCCGTCCAATGACAATTCTTTTCTGAGTGGCCTCAAACAGCGGTTGCTATCATTTATTTTCCGCCGAATAGGGAACGAAGAAACAGATCATCGCTTGGTTGGTTATATGCGACTTCTAAATCCCAGTTCAGCCGTCTCTGTCTTGATTTTCGTCATATTTTACGTATTGGAATTTTTGTTCAGGCATTCATTTGTTTGGCTTCTCTGTTTCTTTTTACAGAGAGTTCAGTGTTTGGCGAAGAATTTCTACTTTCATTTTCAAGACTACATCGACTTGATTATTTGGAAGGTAGAATCTTCACTTTTTGTTGGAATACAATCATACAATCCTTTCCTTGTATCTTTTTGTGCTGACCAAAGTTCTGAATTGAATTGCATATCATAATCCTTCCCTTCTATCATTATTTTGTGTTCTATGCACGCATGATGTGTTACAAGTTGTTTACAGAACTCCTGACCAGGTACAATTCTTGGACCGTCGACACTTACTGCTCAAGCTTGGTAGTGTAGATGGATGGGTGAGTTCTTTTTTCTCGGTCAGTCGTCATTTCATAATAGGGTCTGGGTAAACCAAAACTTTAAAAAGCTGTTAGTACTATCCAAATTGAACTATTGCTACTAAGCCTACTTTAAAGAAGCCTAGATAAGTAGGCTTGCTTGTAATTCGCACCTGCAAATTTATTTTCAAGATTGATGACAAAAGACTATAATCTTCGACTTCCCAAACTCATGAATCTCATGGCTTTACTTTGGGCTTCCTCAAAAGGCCTCGTTATCAATAGAGATAGTATTCCTTGATTATAAACCCATGATCATTCCCTAAATCAGGCGATGTGGGACTTTCATCATCCAACATCTCCCCTCGAACAAAGTATGTCTCCCCTCAATCGGGGCTCGACTCCTTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGACTTCGGGGAGACTCGCCTCCTTTTTCTTTTGAAATCCTTTGTTCAACATTTGAGGATTTACCCATCTATTGACACGATTAAGTTATGGGTATGGCTCTGATACCATGTTATATAAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTTTCATGGCTTTGCTTTGGACTTCCCAAAAATGCCTCATTAACAATGGAGATACTATTCCTTAATTATAAACCCATGATCATTCCAATTAGCCGACGTGGGACTTTCATTATCCAACAAAGTACACTAATTGTGAACTCTGTTACAACTTTAATTGATGCTATAGCCCTCACGTTTTCATGAGTTTGTGATTATCATAGCTCTCTTTCTTGGAAATTGAGGGACTAATTTTTCTTTACATTATTGATAAAAAAATTACAATATTTTTTTATTCTTACATTTATAGGTTTCACGAATGGCCGATCACCACCGGGCATTTTTTGCTGTGTATGACATGGAGACCACTGAAATTGTTGCTTTTTTTCAGGTGTTTGTTTGCTTCCCAGTCCTCCCTTTCTACACTTTTTGTTATCAAGTATTTTCCCCTTCATTTCTAATTCATACCATACTTCCTCCAGAATTCAACAGACGACATTTACTTTCTTTTCGAGCGTTTTTGTAATCACTTCCATGCAGCATCAAGAAATTCATTGTGCTTGAATTTCATATCATCACACTCCAATAACATTCATGCTCAAGAACAACTGAGAAGCTTGAAAAATAAAGCAGTCAGCTATTCACAGGTGAACCTTGTTTATACATTTTTCTGTTTCCCTTGCCATTTGCATCTGTTATTTTCACTGAATCTCATGCATAATTGACTCTCATTCACAGTTTGTGAAGAAGATGCTGGTATCTTTAAGGTTAGTATTTCAACGTGTTTTCTTTTCTATTTATTTGTTTTTGAATGTTTAATTTAAGTAACTAAGTGCTATAGTATTCATTTGGCGCACGTAGTTCAATCTCTTGAGACCCTCAAATGGATTGGAGAACCATTTGAAGTTTTAGTCTTTTCTAAAACAAAATTAAGTTTTTAAAATAATAGGCCCATTCTATAACGTTCTATATCGTTGTTGTTTATAGTTTCCTGTTCTTGAAATATGGGCTTATTTCCTCCACATGTTTTCATCACCCTAAACTGAATTCCTAGTCAAATTCAGTCAGAATACCAAAAATAAAACCAGTTTTTAAAATATGCTTTTCCTTTTTTTAGTTTTCAAATTTTAGCCTAGGTTAGATTTTGTTAACAAAATTTGGGATTTCTTCTGTGAAAGTACGATTATTAGCTTAATTTTTAGAATAAAAAAATGAAACAAAATGATTATGAGACCAAGTAATTTTGTGGATTTTGGTCTATCTTTTTATGCCCATTTATAATCAAATATCGTACAAATTTGTTCTTCACATATAATTTTTTTAGCCACATTTATTTTATATTAAAAATGTTTTCTTTCTATTTTGCTACTAAAATACGATATTTTTTATTCACGGGTCAGTAGAGGCGTGGTTGGTTGATGTGGAAAGTTCGTTATTTTTTGGAAGCAAAGGTTGAAAAAGTAAGAGATAATTTGAAATTTTTGGTGAGAATTTAACACAAAGTTTTGTGTTAAACAGTTGATTTCTGCAACGGATAATTTGAAATTTTTGGTGAGAATTTAACACAAAGTTTTGTGTTAAACAGTTGATTTCTGCAACGGATCGGCACAGACAATCAACAGATCATCCTATAAAGTTTATTTTAAGGCGATCACCTTATTCCCTCAGATTCAAAATTAAATCAGGTATTATTATCATCACTCCCCTATCCTCGTCTTACTGGGTCCGTTACTTTCACTCGATGGTTTATTTTTAAGTAAATTGTGTCAAGTAAAACATTTTTTTCAAAGTATATTTGGGAAAAGCACTTCGTTTCCTTTTTTTTTTTTTTTTTTTTAAGGTTCCGGAAAAAGCACTAATTATTTACAAATTTGTGTTTATTTCCGTATCTTTGGGAGGTGGGGTGGTTTGATAAATAATTCCGGTTTTCAACCTCTTAATTTTCAATGGCACTTTTAAATTTAAAAGATAAAGGGTTTTTTAATGTTTTTCTCTTTCTCTAATTCTCTTTTTATAATGCACTCTTTTTAAGGGTTCCATTTGTCCTGTTTTACACCGACCTTTTCTTTTCTTTTTACGAGTTATTTGAGAAAAACAAAATTAGGTTATAATTTTAGTTTTAGTTTGTGTCCAATATAAGTTTTGAAATTCTAATAAATCTTTTAAGCTTTTAATTTTATGTTTAACAGGTTTTTGAAATTTTAATTTTTTATTTAATAAATTTTATATGTATTTTGATATTTAGAAGTTGACCTATTATTAGCACAAAATTTTAAAATTTTAACATAAAATACAATAAAATTTATAATTTTATAATTTTGTACTAATAGGTTTGTGAATTTCAAAATAACAATTTTGTTTTGACATAAAACTGAAATTTTTTTAATCTATTAAATACAAAATTAAATGCTTTATATCTACTAGATTTTTTTTTAGAAATCCAAATAACTTATTGGATACAACAAAAAAGTTATAAAAATTGAGTATACAAATTTAAAAAAATTTCGAGGAAATGTTGCTAACGAGGGTTGAGTGATTGGAATAGGTCCAGAACGTGGGATAACAGATGGACGAACAAAAGGGGTGTCATCTTTTCTTTTTCATCCTTTTTTACCGCTCGCTCTCTCCATCCAACACACCACCTACTTGCTTCCTTCTGTGGTCAATATTCACTTCCGGATATGAATATAGAAAGAAGAAAAAAAAAAAAAATTGCGTTTTAAAACACCAAATTGTACATAAAAAATAAATTAAAAAGAAAACTATGTACATCGTATAACCCTGTACATGCACCTACTTTTGCGAGTCATTTATATGATGCGACTTTCTCATACCTTAATTTTGATTAATGATTTTTAAACTTCTTCATCCCCCAAAATTCCCTCTCTTATCTTACTAAGGATTTTAGTAACATGTAATCTGGTG

mRNA sequence

ACTGATTCCATCGCCAAACCTCTCTTTCAGTAACCTAAACCCTCGCCCAGTTCTCTCTCCGTTCTATTACTCGTCTTCGTTCGTCGAAATCCGCTAGTGCTTCTCTGCAATCTGAGCCACTCCAATAAAGTGTTTCTCTCTCCGTTCGATTACTCGACTTCGGTCATGAAATCTGCATGAATTTTTCTTCAATCTGAGCCACTTCAATTAAGTAATGTATAGAAGCAACAATGTGGCTGCTAGGATCTTCGATCGCCAAATCGCCACTCCTCCTCCTGGAACCAGCTTTCATTGTGTTAGGCGATTCTATGAGAATATAGTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCGTTGACGACTTTCCTTCCAATGCTCAAATGGCTCTCGTTTTCTTACAAAGGAGATGAAATTGATACGTTTCTAGACTTTCCTTCCAATGCTCAGAAGTTTGAGAGCTTTTTCAACCTGATTTATTCCGTCTCCCTTGCGTCCTGCAACGAGCTTATCTGTAAGGACTTCTTTATTTACATGGAGAGTAACCGATTTGGGCTTTTTGCTACCTCCACTGCTCAAATCCAAGATGCTCCGGCCGTCGGTGGTGCTGTTCCGGGAATTCCTTCTATAGACAAGATTACGTTTCATCTCCTGAGACTAGAGGATGGAGAAATTCTTGACGCGAAGGTGTTTGTCAACGATTTTGTGAATTTGGCTCACAATACGGGCGTCTTTCTCTACGATGATCTATTGGCGATTGTATCGGTACGCTACCAGATTATACATATTCTTCAAATTAGAGATTCCGGCCACCTTGTTGATGTACGAGCTCTAGGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGTAACATTATGTATGTGGGGGTAGCTGAAAGAAGCAGATTGCTTGCGGGTGATGTTGAGAATGGCTACCATCATAGCCCGTCCAATGACAATTCTTTTCTGAGTGGCCTCAAACAGCGGTTGCTATCATTTATTTTCCGCCGAATAGGGAACGAAGAAACAGATCATCGCTTGAGAGTTCAGTGTTTGGCGAAGAATTTCTACTTTCATTTTCAAGACTACATCGACTTGATTATTTGGAAGGTACAATTCTTGGACCGTCGACACTTACTGCTCAAGCTTGGTAGTGTAGATGGATGGGTTTCACGAATGGCCGATCACCACCGGGCATTTTTTGCTGTGTATGACATGGAGACCACTGAAATTGTTGCTTTTTTTCAGAATTCAACAGACGACATTTACTTTCTTTTCGAGCGTTTTTGTAATCACTTCCATGCAGCATCAAGAAATTCATTGTGCTTGAATTTCATATCATCACACTCCAATAACATTCATGCTCAAGAACAACTGAGAAGCTTGAAAAATAAAGCAGTCAGCTATTCACAGTTGATTTCTGCAACGGATCGGCACAGACAATCAACAGATCATCCTATAAAGTTTATTTTAAGGCGATCACCTTATTCCCTCAGATTCAAAATTAAATCAGGTCCAGAACGTGGGATAACAGATGGACGAACAAAAGGGGTGTCATCTTTTCTTTTTCATCCTTTTTTACCGCTCGCTCTCTCCATCCAACACACCACCTACTTGCTTCCTTCTGTGGTCAATATTCACTTCCGGATATGAATATAGAAAGAAGAAAAAAAAAAAAAATTGCGTTTTAAAACACCAAATTGTACATAAAAAATAAATTAAAAAGAAAACTATGTACATCGTATAACCCTGTACATGCACCTACTTTTGCGAGTCATTTATATGATGCGACTTTCTCATACCTTAATTTTGATTAATGATTTTTAAACTTCTTCATCCCCCAAAATTCCCTCTCTTATCTTACTAAGGATTTTAGTAACATGTAATCTGGTG

Coding sequence (CDS)

ATGTATAGAAGCAACAATGTGGCTGCTAGGATCTTCGATCGCCAAATCGCCACTCCTCCTCCTGGAACCAGCTTTCATTGTGTTAGGCGATTCTATGAGAATATAGTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCTTCCGAATCATACGGTTTACGACGTTGAATGTCCGGACCATTCCTTTCGCAAGTTTACCGTTGACGACTTTCCTTCCAATGCTCAAATGGCTCTCGTTTTCTTACAAAGGAGATGAAATTGATACGTTTCTAGACTTTCCTTCCAATGCTCAGAAGTTTGAGAGCTTTTTCAACCTGATTTATTCCGTCTCCCTTGCGTCCTGCAACGAGCTTATCTGTAAGGACTTCTTTATTTACATGGAGAGTAACCGATTTGGGCTTTTTGCTACCTCCACTGCTCAAATCCAAGATGCTCCGGCCGTCGGTGGTGCTGTTCCGGGAATTCCTTCTATAGACAAGATTACGTTTCATCTCCTGAGACTAGAGGATGGAGAAATTCTTGACGCGAAGGTGTTTGTCAACGATTTTGTGAATTTGGCTCACAATACGGGCGTCTTTCTCTACGATGATCTATTGGCGATTGTATCGGTACGCTACCAGATTATACATATTCTTCAAATTAGAGATTCCGGCCACCTTGTTGATGTACGAGCTCTAGGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGCGCTTTTTGTCGTGAAGATGATGAACTTTTTCTCCATTCTAGCACTCAGGCGAGTAACATTATGTATGTGGGGGTAGCTGAAAGAAGCAGATTGCTTGCGGGTGATGTTGAGAATGGCTACCATCATAGCCCGTCCAATGACAATTCTTTTCTGAGTGGCCTCAAACAGCGGTTGCTATCATTTATTTTCCGCCGAATAGGGAACGAAGAAACAGATCATCGCTTGAGAGTTCAGTGTTTGGCGAAGAATTTCTACTTTCATTTTCAAGACTACATCGACTTGATTATTTGGAAGGTACAATTCTTGGACCGTCGACACTTACTGCTCAAGCTTGGTAGTGTAGATGGATGGGTTTCACGAATGGCCGATCACCACCGGGCATTTTTTGCTGTGTATGACATGGAGACCACTGAAATTGTTGCTTTTTTTCAGAATTCAACAGACGACATTTACTTTCTTTTCGAGCGTTTTTGTAATCACTTCCATGCAGCATCAAGAAATTCATTGTGCTTGAATTTCATATCATCACACTCCAATAACATTCATGCTCAAGAACAACTGAGAAGCTTGAAAAATAAAGCAGTCAGCTATTCACAGTTGATTTCTGCAACGGATCGGCACAGACAATCAACAGATCATCCTATAAAGTTTATTTTAAGGCGATCACCTTATTCCCTCAGATTCAAAATTAAATCAGGTCCAGAACGTGGGATAACAGATGGACGAACAAAAGGGGTGTCATCTTTTCTTTTTCATCCTTTTTTACCGCTCGCTCTCTCCATCCAACACACCACCTACTTGCTTCCTTCTGTGGTCAATATTCACTTCCGGATATGA

Protein sequence

MYRSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFTFRIIRFTTLNVRTIPFASLPLTTFLPMLKWLSFSYKGDEIDTFLDFPSNAQKFESFFNLIYSVSLASCNELICKDFFIYMESNRFGLFATSTAQIQDAPAVGGAVPGIPSIDKITFHLLRLEDGEILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGHLVDVRALGAFCREDDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAGDVENGYHHSPSNDNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYIDLIIWKVQFLDRRHLLLKLGSVDGWVSRMADHHRAFFAVYDMETTEIVAFFQNSTDDIYFLFERFCNHFHAASRNSLCLNFISSHSNNIHAQEQLRSLKNKAVSYSQLISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPERGITDGRTKGVSSFLFHPFLPLALSIQHTTYLLPSVVNIHFRI

Homology

[Close]

BLAST of CmaCh06G011580 vs. ExPASy Swiss-Prot
Match: Q9ZNU6 (Light-mediated development protein DET1 OS=Solanum lycopersicum OX=4081 GN=DET1 PE=1 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 3.8e-184
Identity = 342/563 (60.75%), Postives = 401/563 (71.23%), Query Frame = 0


Query: 1   MYRSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFTFRIIR 60
           M+++NNV AR+F+RQI TP PGTS H  RRFYEN+VP++T+YDVECPDHSFRKFT   + 
Sbjct: 1   MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY 60

Query: 61  FTTLNVRTIPFASLPLTTFLPMLKWLSFSYKGDEIDTFLDFPSNAQKFESFFNLIYSVSL 120
           F + +          L  + P   WL+FS K ++ DT  D P  A+KFESFF  +YSV+L
Sbjct: 61  FVSFSRN-----HQDLVVYRP--TWLTFSCKEEDCDTH-DLPLKARKFESFFTQLYSVTL 120

Query: 121 ASCNELICKDFFIYMESNRFGLFATSTAQIQDAPAVGGAVPGIPSIDKITFHLLRLEDGE 180
           AS  ELICKDFF+YMESN+FGLFATSTAQI DAP  GGA+ G+PS++KITFHLLRL DG 
Sbjct: 121 ASSGELICKDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGA 180

Query: 181 ILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGHLVDVRALGAFCRE 240
           ILD +VF ND+VNLAH+ G FLYDDLLAIVS+RYQ IHILQIRDSG LVDVRA+G FCRE
Sbjct: 181 ILDERVFHNDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCRE 240

Query: 241 DDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAGDVENGYHHS-PSN 300
           DDELFL+S++Q                                +L   V NG+HHS P +
Sbjct: 241 DDELFLNSNSQ--------------------------------VLVNHVGNGFHHSLPQS 300

Query: 301 DNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYIDLIIWKVQFLDRRH 360
           + SFLSG+KQRLLS+IFR I N E D  +RVQCL K FYFHFQDYIDLIIWKVQFLDR H
Sbjct: 301 ETSFLSGIKQRLLSYIFRGIWN-EADQTMRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHH 360

Query: 361 LLLKLGSVDGWVSRMADHHRAFFAVYDMETTEIVAFFQNSTDDIYFLFERFCNHFHAASR 420
           LL+K GSVDG VSR AD H +FFAVY+METTEIVAF+QNS D++YFLFE F +HFH +S+
Sbjct: 361 LLIKFGSVDGGVSRNADIHPSFFAVYNMETTEIVAFYQNSADELYFLFELFSDHFHVSSK 420

Query: 421 NSLCLNFISSHSNNIHAQEQLRSLKNKAVSYSQ--------------------------- 480
           +SL +NF+SSHSNNIHA EQLR  KNKA ++SQ                           
Sbjct: 421 SSLHMNFMSSHSNNIHALEQLRCTKNKATNFSQFVKKMMASLPCSCQSQSPSPYFDQSLF 480

Query: 481 -----LISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPERGITDGRTKGVSSFLFHPF 531
                LISA DRHRQSTDHPIKFI RR P  L+FK+K GPE G TDGRTK + SFLFHP 
Sbjct: 481 RFDEKLISAIDRHRQSTDHPIKFISRRQPNILKFKMKPGPEAGSTDGRTKKICSFLFHPI 522

[Close]

BLAST of CmaCh06G011580 vs. ExPASy Swiss-Prot
Match: P48732 (Light-mediated development protein DET1 OS=Arabidopsis thaliana OX=3702 GN=DET1 PE=1 SV=2)

HSP 1 Score: 600.9 bits (1548), Expect = 1.4e-170
Identity = 323/569 (56.77%), Postives = 393/569 (69.07%), Query Frame = 0


Query: 1   MYRSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFT---FR 60
           M+ S NV AR+F+RQI TPPPG S +  R FYEN+VP++T+YDVE PDH FRKFT     
Sbjct: 1   MFTSGNVTARVFERQIRTPPPGASVNRARHFYENLVPSYTLYDVESPDHCFRKFTEDGLF 60

Query: 61  IIRFTTLNVRTIPFASLPLTTFLPMLKWLSFSYKGDEIDTFLDFPSNAQKFESFFNLIYS 120
           +I F+  +   I +             WL++S   D   T    P  A KF+SFF  +YS
Sbjct: 61  LISFSRNHQELIVYRP----------SWLTYSTTDDSTTTLPPLPRRASKFDSFFTQLYS 120

Query: 121 VSLASCNELICKDFFIYMESNRFGLFATSTAQIQDAPAVGG-AVPGIPSIDKITFHLLRL 180
           V+LAS NELICKDFF+Y ++ RFGLFATSTAQI D+ +    AVPG+PSIDKITF LLRL
Sbjct: 121 VNLASSNELICKDFFLYHQTRRFGLFATSTAQIHDSSSPSNDAVPGVPSIDKITFVLLRL 180

Query: 181 EDGEILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGHLVDVRALGA 240
           +DG +LD +VF++DFVNLAHN GVFLYDDLLAI+S+RYQ IH+LQIRDSGHLVD RA+G 
Sbjct: 181 DDGVVLDERVFLHDFVNLAHNMGVFLYDDLLAILSLRYQRIHLLQIRDSGHLVDARAIGY 240

Query: 241 FCREDDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAGDVENGYHHS 300
           FCREDDELFL+SS+QA     +  +  L  S +                    ENG  HS
Sbjct: 241 FCREDDELFLNSSSQAMMSQDKSKQQSLSGSKEDDT----------------GENGLRHS 300

Query: 301 ---PSNDNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYIDLIIWKVQ 360
              PS  NSFLSG+KQRLLSFIFR I NEE+D+ +RVQ L K FYFHFQDY+DLIIWKVQ
Sbjct: 301 LSQPSGSNSFLSGVKQRLLSFIFREIWNEESDNVMRVQSLKKKFYFHFQDYVDLIIWKVQ 360

Query: 361 FLDRRHLLLKLGSVDGWVSRMADHHRAFFAVYDMETTEIVAFFQNSTDDIYFLFERFCNH 420
           FLDR+HLL+K GSVDG V+R ADHH AFFAVY+METT+IVAF+QNS +D+Y LFE+F +H
Sbjct: 361 FLDRQHLLIKFGSVDGGVTRSADHHPAFFAVYNMETTDIVAFYQNSAEDLYQLFEQFSDH 420

Query: 421 FHAASRNSLCLNFISSHSNNIHAQEQLRSLKNKAVSYSQ--------------------- 480
           F  +S     +NF++SHSNN++A EQL+  KNK+ S+SQ                     
Sbjct: 421 FTVSSSTPF-MNFVTSHSNNVYALEQLKYTKNKSNSFSQFVKKMLLSLPFSCQSQSPSPY 480

Query: 481 -----------LISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPERGITDGRTKGVSS 531
                      LISA DRHRQS+D+PIKFI RR P +L+FKIK GPE G  DGR+K + S
Sbjct: 481 FDQSLFRFDEKLISAADRHRQSSDNPIKFISRRQPQTLKFKIKPGPECGTADGRSKKICS 540

[Close]

BLAST of CmaCh06G011580 vs. ExPASy Swiss-Prot
Match: Q7L5Y6 (DET1 homolog OS=Homo sapiens OX=9606 GN=DET1 PE=1 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-47
Identity = 171/581 (29.43%), Postives = 269/581 (46.30%), Query Frame = 0


Query: 3   RSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFTFRIIRFT 62
           ++ NV  R+  R+I++   GT +H VR F++N+ PN TV +VE P    RKF+     F 
Sbjct: 14  QNQNVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFI 73

Query: 63  TLNVRTIPFASLPLTTF--LPMLKWLSFSYKGDEIDTFLDFPS---NAQKFESFFNLIYS 122
             +       SL +  +      + L   Y+G+ +    D  S     + FE FF L++ 
Sbjct: 74  AFSSDQ---TSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHI 133

Query: 123 VSLASCNELICKDFFIYMESNRFGLFATSTAQIQDAP---------AVGGAVPGIPS-ID 182
            ++A+  E + ++  ++ +  R  +   S A + D P               P   S ++
Sbjct: 134 TNVAANGEHLNRECSLFTDDCRC-VIVGSAAYLPDEPHPPFFEVYRNSESVTPNPRSPLE 193

Query: 183 KITFHLLRLEDGEILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGH 242
             + H++ L  G + D + F  D V L+HN G++LY ++LAI+SV+ Q IH+ Q+   G 
Sbjct: 194 DYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGT 253

Query: 243 LVDVRALGAFCREDDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAG 302
            +DVR +G FC EDD L     T ++ F     E+   S T  +N               
Sbjct: 254 FIDVRTIGRFCYEDDLL-----TVSAVF----PEVQRDSQTGMAN--------------- 313

Query: 303 DVENGYHHSPSNDNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYI-D 362
                    P  D  F++ LK RLL +++RR   + +        +AK  +F + D +  
Sbjct: 314 ---------PFRD-PFINSLKHRLLVYLWRRAEQDGS-------AMAKRRFFQYFDQLRQ 373

Query: 363 LIIWKVQFLDRRHLLLKLGSVDGWVSRMADHHRA-FFAVYDMETTEIVAFFQNSTDDIYF 422
           L +WK+Q LD  HL +K  S D    R+ D  +A FF VY+M TTE++A F+N++D++  
Sbjct: 374 LRMWKMQLLDENHLFIKYTSEDVVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLE 433

Query: 423 LFERFCNHFHAASRNSLCLNFISSHSNNIHAQEQLR----------------------SL 482
           LFE FC+ F  A+ +S      S+ SNN   Q Q R                       L
Sbjct: 434 LFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQL 493

Query: 483 KNKAVSYS--------------QLISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPER 531
              A SYS              + +S  +R +   DHPI+F  R S   L+F+I++G   
Sbjct: 494 PISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGL-LKFEIQAGLLG 546

[Close]

BLAST of CmaCh06G011580 vs. ExPASy Swiss-Prot
Match: Q9D0A0 (DET1 homolog OS=Mus musculus OX=10090 GN=Det1 PE=2 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-47
Identity = 171/581 (29.43%), Postives = 269/581 (46.30%), Query Frame = 0


Query: 3   RSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFTFRIIRFT 62
           ++ NV  R+  R+I++   GT +H VR F++N+ PN TV +VE P    RKF+     F 
Sbjct: 14  QNQNVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFI 73

Query: 63  TLNVRTIPFASLPLTTF--LPMLKWLSFSYKGDEIDTFLDFPS---NAQKFESFFNLIYS 122
             +       SL +  +      + L   Y+G+ +    D  S     + FE FF L++ 
Sbjct: 74  AFSSDQ---TSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVSIRGRLFERFFVLLHI 133

Query: 123 VSLASCNELICKDFFIYMESNRFGLFATSTAQIQDAP---------AVGGAVPGIPS-ID 182
            ++A+  E + ++  ++ +  R  +   S A + D P               P   S ++
Sbjct: 134 TNVAANGEHLNRECSLFTDDCRC-VIVGSAAYLPDEPHPPFYEVYRNSESVTPNPRSPLE 193

Query: 183 KITFHLLRLEDGEILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGH 242
             + H++ L  G + D + F  D V L+HN G++LY ++LAI+SV+ Q IH+ Q+   G 
Sbjct: 194 DYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGT 253

Query: 243 LVDVRALGAFCREDDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAG 302
            +DVR +G FC EDD L     T ++ F     E+   S T  +N               
Sbjct: 254 FIDVRTIGRFCYEDDLL-----TVSAVF----PEVQRDSQTGMAN--------------- 313

Query: 303 DVENGYHHSPSNDNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYI-D 362
                    P  D  F++ LK RLL +++RR   + +        +AK  +F + D +  
Sbjct: 314 ---------PFRD-PFINSLKHRLLVYLWRRAEQDGS-------AMAKRRFFQYFDQLRQ 373

Query: 363 LIIWKVQFLDRRHLLLKLGSVDGWVSRMADHHRA-FFAVYDMETTEIVAFFQNSTDDIYF 422
           L +WK+Q LD  HL +K  S D    R+ D  +A FF VY+M TTE++A F+N++D++  
Sbjct: 374 LRMWKMQLLDENHLFIKYTSEDVVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLE 433

Query: 423 LFERFCNHFHAASRNSLCLNFISSHSNNIHAQEQLR----------------------SL 482
           LFE FC+ F  A+ +S      S+ SNN   Q Q R                       L
Sbjct: 434 LFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQL 493

Query: 483 KNKAVSYS--------------QLISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPER 531
              A SYS              + +S  +R +   DHPI+F  R S   L+F+I++G   
Sbjct: 494 PISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGL-LKFEIQAGLLG 546

[Close]

BLAST of CmaCh06G011580 vs. TAIR 10
Match: AT4G10180.1 (light-mediated development protein 1 / deetiolated1 (DET1) )

HSP 1 Score: 600.9 bits (1548), Expect = 1.0e-171
Identity = 323/569 (56.77%), Postives = 393/569 (69.07%), Query Frame = 0


Query: 1   MYRSNNVAARIFDRQIATPPPGTSFHCVRRFYENIVPNHTVYDVECPDHSFRKFT---FR 60
           M+ S NV AR+F+RQI TPPPG S +  R FYEN+VP++T+YDVE PDH FRKFT     
Sbjct: 1   MFTSGNVTARVFERQIRTPPPGASVNRARHFYENLVPSYTLYDVESPDHCFRKFTEDGLF 60

Query: 61  IIRFTTLNVRTIPFASLPLTTFLPMLKWLSFSYKGDEIDTFLDFPSNAQKFESFFNLIYS 120
           +I F+  +   I +             WL++S   D   T    P  A KF+SFF  +YS
Sbjct: 61  LISFSRNHQELIVYRP----------SWLTYSTTDDSTTTLPPLPRRASKFDSFFTQLYS 120

Query: 121 VSLASCNELICKDFFIYMESNRFGLFATSTAQIQDAPAVGG-AVPGIPSIDKITFHLLRL 180
           V+LAS NELICKDFF+Y ++ RFGLFATSTAQI D+ +    AVPG+PSIDKITF LLRL
Sbjct: 121 VNLASSNELICKDFFLYHQTRRFGLFATSTAQIHDSSSPSNDAVPGVPSIDKITFVLLRL 180

Query: 181 EDGEILDAKVFVNDFVNLAHNTGVFLYDDLLAIVSVRYQIIHILQIRDSGHLVDVRALGA 240
           +DG +LD +VF++DFVNLAHN GVFLYDDLLAI+S+RYQ IH+LQIRDSGHLVD RA+G 
Sbjct: 181 DDGVVLDERVFLHDFVNLAHNMGVFLYDDLLAILSLRYQRIHLLQIRDSGHLVDARAIGY 240

Query: 241 FCREDDELFLHSSTQASAFCREDDELFLHSSTQASNIMYVGVAERSRLLAGDVENGYHHS 300
           FCREDDELFL+SS+QA     +  +  L  S +                    ENG  HS
Sbjct: 241 FCREDDELFLNSSSQAMMSQDKSKQQSLSGSKEDDT----------------GENGLRHS 300

Query: 301 ---PSNDNSFLSGLKQRLLSFIFRRIGNEETDHRLRVQCLAKNFYFHFQDYIDLIIWKVQ 360
              PS  NSFLSG+KQRLLSFIFR I NEE+D+ +RVQ L K FYFHFQDY+DLIIWKVQ
Sbjct: 301 LSQPSGSNSFLSGVKQRLLSFIFREIWNEESDNVMRVQSLKKKFYFHFQDYVDLIIWKVQ 360

Query: 361 FLDRRHLLLKLGSVDGWVSRMADHHRAFFAVYDMETTEIVAFFQNSTDDIYFLFERFCNH 420
           FLDR+HLL+K GSVDG V+R ADHH AFFAVY+METT+IVAF+QNS +D+Y LFE+F +H
Sbjct: 361 FLDRQHLLIKFGSVDGGVTRSADHHPAFFAVYNMETTDIVAFYQNSAEDLYQLFEQFSDH 420

Query: 421 FHAASRNSLCLNFISSHSNNIHAQEQLRSLKNKAVSYSQ--------------------- 480
           F  +S     +NF++SHSNN++A EQL+  KNK+ S+SQ                     
Sbjct: 421 FTVSSSTPF-MNFVTSHSNNVYALEQLKYTKNKSNSFSQFVKKMLLSLPFSCQSQSPSPY 480

Query: 481 -----------LISATDRHRQSTDHPIKFILRRSPYSLRFKIKSGPERGITDGRTKGVSS 531
                      LISA DRHRQS+D+PIKFI RR P +L+FKIK GPE G  DGR+K + S
Sbjct: 481 FDQSLFRFDEKLISAADRHRQSSDNPIKFISRRQPQTLKFKIKPGPECGTADGRSKKICS 540

The following BLAST results are available for this feature:

BLAST of CmaCh06G011580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNU6	3.8e-184	60.75	Light-mediated development protein DET1 OS=Solanum lycopersicum OX=4081 GN=DET1 ...	[more]
P48732	1.4e-170	56.77	Light-mediated development protein DET1 OS=Arabidopsis thaliana OX=3702 GN=DET1 ...	[more]
Q7L5Y6	2.6e-47	29.43	DET1 homolog OS=Homo sapiens OX=9606 GN=DET1 PE=1 SV=2	[more]
Q9D0A0	2.6e-47	29.43	DET1 homolog OS=Mus musculus OX=10090 GN=Det1 PE=2 SV=2	[more]

BLAST of CmaCh06G011580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10180.1	1.0e-171	56.77	light-mediated development protein 1 / deetiolated1 (DET1)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019138	De-etiolated protein 1, Det1	PFAM	PF09737	Det1	coord: 129..449 e-value: 1.2E-90 score: 304.6 coord: 452..530 e-value: 2.1E-22 score: 79.8
IPR019138	De-etiolated protein 1, Det1	PANTHER	PTHR13374	DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG	coord: 452..530 coord: 3..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G011580.1	CmaCh06G011580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process