CmaCh06G010630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G010630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr06: 7141035 .. 7143312 (+)
RNA-Seq Expression	CmaCh06G010630
Synteny	CmaCh06G010630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTTCTCTTGCAGTCGATTTCACACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCGAAATCCCAAGATTCGCATTCGTTTCGAACACACAACTGAATTTCGTTGCTCTGAACTTCCAATCCTATTTCTGTAGAAACTGGCTGTGGATGTAAACTGAAACATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGGTGGGTTGTGTTTTCTTTCTTTCTCCGAACTTGTAGATTTGAATATCTGTTCCTCCGAACCATGAAGGTGGGTTGTGTTTTCTTTCTTTCTCCGAACTTGTAGATTTTCTCTGTGAAAATGAATTGAAAGAAATCTGAAATTATGCTGTTCTATTAGGTATATGCTTCTTTGAAGTGAATGAGTTTGCTGTTTGGGAATTCTGTGCCAAGGGGTTGGTTTCTAAACGCTTTTTGATTTGAAGTGAATGAGTTTGCTGTTTGGGAATTCTGTGCCAAGGGGTTGGTTTCTAAACGCTTTTTGAAGTGTTTAATTAGGGCGAATGGAATACAATTAGTTCTAATTTTTTTGATCTGGAATTGCTACCTGTTCTTCTCACTGATTTGATTTGCAATTCTGGTTCAGGATGGGGGGATTAAGTTCAAATACTCCTATTTTGTTGGCTTTTGAGCTAAATTTATGTATCCAACGGCAGTTTTTGAGCATGCCTTTCTGGAGCATTCAGCTTAAGATGTAGAATGACTATTTTAGGACTAGTGAACTGTAGTGAACTGTTTCAGTGTGCAATATTTTTTAAGTACTTAGAAAGTCATTTCAATTGGGTCTTTCATTTATCGATTTCATCGTATATGAGAAGCTCGTTGATATAATTATATTTCATTCAATTGGGTCTTTCATTTATCGATTTCATCGTATATGAGAAGCTCGTTGATATAATTATATTTCATTTTTTTGTTCAGTTTTTCTTGTTCTTTTCCTGTAGTGTTCCAAACTGTATTTCTGTTTCATTTCCTTCTGTCTTGTCCTTCTGTTGGTTGCAGTTTTTAAAATTGTTGACAATTGCAAAAAAATTGTTTTCCTTCTGTCTTGTCCTTCTGTTGGTTGCAGTTTTTAAAATTGTTGACAATTGCAAAAAAATTGTTGATTGTGATGATACTTCAATGTGTTACGTTTACAATCTATGTTTCAAGTGAGTTTAGTAAGGCTGCTCATCACTACTTGTGGATCTTTTTGGCCAATTCTGAAAATTACACAAAGTGTTTCACTAGGTAGGTTGTTCTTGCTGTTTCGGGGTGAGTGTATCGACTTTAGTAGTTATTCCTTTCGGTAGCAAATATTCTAATGCAGCTATTGTATCACAATTTGAAAAACAAAGTCAAAGTTCTTACTCTAAGCTAACGAATTTCGGCTGTCCTATGATAGCTCCGAGTCAGAGAATTCTAGGACTTTTCAAGACAAGGATTTAGCCAGATGGTTAGCTTTTTCGTGTACCCTTAATCTTATTATTTTTGTGACTCTAGTGCCTCTTGTATTTATGTTGATCGAGGTCCTTTTTTTCGTGAAATAGCTTTTAGCTTTTAGGGTGGATTGCTCATTCCCCTGCTTTTGTGTTCCTTTTGATTCTCTATTTCAATGGTCTGCAGAAGTCTTTATGCCATCTCTACTTTAGTTATATTATATTTATGGTTCGTGAGCGCTTCGATAATTCGTGCATGTTCTGATTGATTACGCCAACCTACGATCTTTTTCAAAAAGCAAATATTAACCTTTTGGACTCGCATGTTCTGATTGATTACGCCAACCTACGATCTTTTTCAAAAAGCAAATATTAACCTTTTGGACTCGATCGTGAGTTTACTCCGAGGATGTACTTGTGTGACAATGTTAGTGTGTCTGGTGGTAATGAAGAGTTATTCTGATGATACATATAGGATTTATATACTCAGCTGTACGGTCTGACTGACAAATCATTTTGTTATGCAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAGTGA

mRNA sequence

CTCTCTCTCTCTCTCTTCTCTTGCAGTCGATTTCACACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCGAAATCCCAAGATTCGCATTCGTTTCGAACACACAACTGAATTTCGTTGCTCTGAACTTCCAATCCTATTTCTGTAGAAACTGGCTGTGGATGTAAACTGAAACATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAGTGA

Coding sequence (CDS)

ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCATGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGAGCCTCGGAGCCGGGAATATCTGTTCCTCCGAACCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACGGTCCTTCATGACGAGGGTTTAGAAACAGAAAAGAAGATACAATTGCTCAAAGATAAGTGA

Protein sequence

MSFDKPGEDTGVSGFESEEMEPDSEHEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGASEPGISVPPNHEDDEQQITRGEGTVLHDEGLETEKKIQLLKDK

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh06G010630 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G010630 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..28
None	No IPR available	PANTHER	PTHR36045	OS04G0558500 PROTEIN	coord: 16..112
None	No IPR available	PANTHER	PTHR36045:SF2	OS04G0558500 PROTEIN	coord: 16..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010630.1	CmaCh06G010630.1	mRNA