CmaCh06G009960 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G009960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Cma_Chr06: 6734275 .. 6739204 (-)
RNA-Seq Expression	CmaCh06G009960
Synteny	CmaCh06G009960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCCATCCGCTTGAAAGCCCTCGTCGTTTCAGCCCAGAAGGGGCCTTCGTCTTTCTTCCGCTCACAAAGGCCCGAATCGGAAGAACTCATCTGATAGATTTAACGCAGCTCTGATTCTCCCTTTTCTCTGAGCCTGGAGAGGGAAAAACAAAAAGGAAAAGGAAAAGGAAAAGGAAATCCAACCCAGATTACAGAACCAGAATTCGCTCATAACCATACCCAGATTCCAATTCTTCTAGCCCCTTCAATTATTTACTCTACTGGTATGCCTTACACGACTCGCACTCTAGTTATTCCCCTGTTTTTGCTATTTCAATATCTGTGCTCTTCACTTTTCACTACTATAAAGTGTTCAGATGGGGTTATGATTCGTTTGATTTTCGTTTTTTTTTTTTTTTGTCTCCTTTCCATTTTCAGCTTGAATTTCTTACAGTGTCGTGTTCTTTTCTTTTTGTTTGACACCCTTTTTGGGTTCTTTAGCTGTCTCGGAATGAGCATGTTGACGAGATTTATTCTGCTTATTTGTGTTTATTATGTTTAACATTACATTTTGGTGTGTTTTTGTTTCGATAGGGTTTGGGATTTTGCAATCCCCATTCCTTTCTCGCTTTCTTTTTTGCTATTTGATTCTGTGATTCGTTTATTGGAAAAGTGAGGCGTTTCCTTTGCGTTGTATTCTGTTTGTTCGACTGGCATTTTGGGAGCTATGTCTGATTTATTTTTTTGTTCTTGGGTTTGAAATGAAGCACAGTGGTGGATAGAACATGAGTTAGGCTTATGCTCCGATAGTTTTTGTTTCTTAATTTTGTGAGCTCGTTTGTTTTAGTTTTTAGAATTTCATCATCTTAGAACAAGCACGTGGAATTTTACTTTTAATTTTCTTCAATCTCTTTATCCTTATCTATGAAATCTGGACTCCTATTACTGTTGCTTCTAGATATCTTCAACACTGAACTAAACCCATATGTAGAACTTGAATGTTTTCATTTTACTCGTGTTAATCTTGTTTCATTTTCATTTTAATAGTTTAATCCATATTTAGAACTTGAATGCATTTATTATATTACAGGTGATTTTGATGTTTATGAAGTTTGTTTGTTGACACTATCTGCCACATAGCGCAGTCATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGGTCTGGAATGGTGTTTATTCTTTCTCGTGCTCTATCTTTCTTTCTATGGGCCTTCGATTTTAGAGGTAAGTTCTTTTGGTAATACAATTGTTTTGCAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGTAATTGTCGGGACCCTTTAAGACTTTGATGTCCTTATAAGTACTTTACCATGTTTCAGCAGCCAGAGCTGCTCTTTTTCTGATATCCATCACCAAATTTTTTTAATGTAATTCTAGTTTGTCCTTCATACGACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGTGGAGTTGCAAATTTATACATCATCTAGAAATTTATAGTTATTGAGCCCTTATGTTTTTTCTTCTGTATGAACAATTGCAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTAATTGAGTTACCTTTTTGGAGAAAATATATGGGGGGGTCTGTATGGCATTTTTCAAGTACCTTGAAATTTCATATCGACTGGAATTTGGTTAACAAATGTGATAGGTTAAAAGATGAAAGTCGTATATCGTGCAGTTGTGTTTCTTCAATTTCAATAGCTAAATAAGTGATAGCAACCAAAATCTGGCCCACAAAATTATATTGATTGACCAACTGAACATTGGGTTAGGAAATGTGAGTAGGAAGATAGTCATCTTGGTAATTTTTAATTGCCTGGATTTCTCTTTGAGCTAAGTTCAGTTCAAAACCGTCTTAAAGTAGTATTCGGCATCCCACTGGATCTGGCTGCCACTGACAAACTTCAACAAATTCTAAATGACCCCATGGCTAATGCTACAAGGGCATGGTTGGGAGTGATTTTGAAATGGTTAAAATTACTTTTATTGTATTCAAAATCATTTTAAAACATGTTTTTAATGATTCAAAATCAATTTTTATAAATTACTTTTATTGTATTCAAAATCATTTTAAAACATGTTTTTAATGATTCAAAATCAATTTTTATGGTATGAAAATTGTGTTTAAAAGTGTAGAATCAATCATTAAGTGGATTTTGAATAATTAATAGCATGTTTTCGTGTGTAACATGGCAAAAGTGATTTTAACCCTTTCAAAACCACTCCCAAACACGTTTCATGCAATCTCCAGGAAATTTGTCTTCTGGAACAATCTCTACCTAACAATATGTCAGCATCTTGGTGAACGAGTGAGCATTCAGCACAATACTTGACTATTAAAGTAGCTTCATGTTTCCAATTGTTTCCATCCCTCGAACCTTTTAACTAACCGTGATCAGCTCTCTTTATGACTGTGTATTAGATGTACTTGAAGGAATTGAAATATAATTTGAAATACAATATAGTTTTCAAATTCACAGGAAGATATTTAAAAAAGCATGGTAGTTCGAATACTACATTGGTGATGATGAAAGCTATAAAGACTTGTTTAGTTTCGACATTGACTGCCTGTTTTCTATGTTCCATTGGTGATGATGAAAGCTATAAAGACTTGTTTAGTTTCGACATTGACTGCCTGTTTTCTATGTTCGTGCTAGTAAGTTTTCATAGTTCTATTACATTGCGGTTCGCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGTTTTATTTCTATATCCTCTGAGATTTACATTCGAAATCTGAAATGTACAATCATATCTGCTTTTATTTACAGTGAAACGTTAAAAATATTTCGGGATTGTGTTTGTGTTCCTTGATGATAAGAGTGAATTCAAAAATGATTTGTTCGACTTCTTTTGACTGAAATAATAATCTTCTGAGATCTGCATTTCAAAATAGTAATAATAATAATCTTCTGAGATCTGCATTTCAAAATAGTAATAATAATAATCTTCTGAGATTTTTTTATGCAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGGTAATCTGCTCGTTTATCACCCGAAGCAAAAGAAATGAAATGAAAAAAGACTTTGGCCACATTAATCTCATGGATTTTCTTGCATGAACAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTGTAAGATCTCACAACTCTTACTCGAATCAAAATCCATTTTTATATGACTATATAAGATAGTAAATTCTATGTATGATTACTTGGGAATGCAGTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAACGGTAAAAGAGCTGAAAAGGATTGTGTGACTGGAGATTAGAAGGCTAAATCACAGGAAATAACAAAAATCCCCACTCAGAAAAAGAATGTAAAAGAAACCGAACAAGATGAGAGAAAGAACAGAGAGGTTTTTGCTATTATGGCACTTCTTATTTAGCTCAGAGTTGAACAAAGAGAATTGTGTGTACCATAAGCAATATGCAGTTCAAAGTTTTACTCAGTTTTAGAATCTCCTGTTCTTTCTCCCATTTTTTTTATGTCCTTTTGAAGGTGAAAGTCTGTGTAATCACTGGTAAAGGATAACTTCATTGTTCTTCATCTCTTTTTCTGAGAAGATTCTTTCTGTTCCTTTTCCCCGTTCAATTCGAATCTCTCACTTTTTAGTCGAAACTCGAAGGGTATACTGCCTGGTTGGTACGAATTTGCTATGA

mRNA sequence

AGCCCATCCGCTTGAAAGCCCTCGTCGTTTCAGCCCAGAAGGGGCCTTCGTCTTTCTTCCGCTCACAAAGGCCCGAATCGGAAGAACTCATCTGATAGATTTAACGCAGCTCTGATTCTCCCTTTTCTCTGAGCCTGGAGAGGGAAAAACAAAAAGGAAAAGGAAAAGGAAAAGGAAATCCAACCCAGATTACAGAACCAGAATTCGCTCATAACCATACCCAGATTCCAATTCTTCTAGCCCCTTCAATTATTTACTCTACTGGTGATTTTGATGTTTATGAAGTTTGTTTGTTGACACTATCTGCCACATAGCGCAGTCATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAACGGTAAAAGAGCTGAAAAGGATTGTGTGACTGGAGATTAGAAGGCTAAATCACAGGAAATAACAAAAATCCCCACTCAGAAAAAGAATGTAAAAGAAACCGAACAAGATGAGAGAAAGAACAGAGAGGTTTTTGCTATTATGGCACTTCTTATTTAGCTCAGAGTTGAACAAAGAGAATTGTGTGTACCATAAGCAATATGCAGTTCAAAGTTTTACTCAGTTTTAGAATCTCCTGTTCTTTCTCCCATTTTTTTTATGTCCTTTTGAAGGTGAAAGTCTGTGTAATCACTGGTAAAGGATAACTTCATTGTTCTTCATCTCTTTTTCTGAGAAGATTCTTTCTGTTCCTTTTCCCCGTTCAATTCGAATCTCTCACTTTTTAGTCGAAACTCGAAGGGTATACTGCCTGGTTGGTACGAATTTGCTATGA

Coding sequence (CDS)

ATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYRPY

Homology

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BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 5.4e-161
Identity = 305/499 (61.12%), Postives = 390/499 (78.16%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + ++  +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPG ENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +       +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 7.0e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

[Close]

BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 9.1e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

[Close]

BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.1e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 368 GRGGRGGYG-----YPPDYYG 372

[Close]

BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.1e-44
Identity = 135/423 (31.91%), Postives = 209/423 (49.41%), Query Frame = 0


Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+EVF+G + RD+ E++L  L E  G I+++R++ D  SG+++GYAFI+F  KE+AQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T++        V  G  ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G + +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPD---GAYSHISGSHSNHLLH--------------- 401
           E    EIEG+ +E+VLAKP   K+ +      +  S ++ ++  H               
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 402 AGYGSYGGSP--------YGSLGGY---GVTAGLHQP--------MIYGRG--------- 461
            G G YG  P        Y    GY       G   P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 462 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRS-GGSSSGDEV 477
           P P G    P   P GR GY   Q G P+ P R  R     G GGP  +  G  S G   
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSR----GGRGGPAQQQRGRGSRGSRG 566

[Close]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL
Match: A0A6J1IBB5 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473603 PE=4 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 1.1e-268
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL
Match: A0A6J1IHG4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473603 PE=4 SV=1)

HSP 1 Score: 935.3 bits (2416), Expect = 1.1e-268
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 62

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 483
           PY
Sbjct: 483 PY 484

[Close]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL
Match: A0A6J1FDC4 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 1.1e-265
Identity = 476/482 (98.76%), Postives = 477/482 (98.96%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL
Match: A0A6J1FD95 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444327 PE=4 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 1.1e-265
Identity = 476/482 (98.76%), Postives = 477/482 (98.96%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 62

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 483
           PY
Sbjct: 483 PY 484

[Close]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL
Match: A0A1S3AUX7 (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 9.6e-246
Identity = 439/482 (91.08%), Postives = 462/482 (95.85%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FS DGRNN+S+ESIENR+KSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKE+AQKAIE+LHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPG ENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKS PDN+AA+QVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKK DGAYSHISGS+ NHLLH GYG YGG+PYGS+GGYGVTAG HQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. NCBI nr
Match: XP_022974824.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974825.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974826.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974827.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP_022974828.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 935.3 bits (2416), Expect = 2.2e-268
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. NCBI nr
Match: XP_022974823.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 935.3 bits (2416), Expect = 2.2e-268
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 62

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 483
           PY
Sbjct: 483 PY 484

[Close]

BLAST of CmaCh06G009960 vs. NCBI nr
Match: KAG6597046.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 928.3 bits (2398), Expect = 2.7e-266
Identity = 478/482 (99.17%), Postives = 479/482 (99.38%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. NCBI nr
Match: XP_022938168.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938176.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938184.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938192.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >XP_022938201.1 heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 925.2 bits (2390), Expect = 2.2e-265
Identity = 476/482 (98.76%), Postives = 477/482 (98.96%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 61  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 361 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

[Close]

BLAST of CmaCh06G009960 vs. NCBI nr
Match: XP_022938159.1 (heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 925.2 bits (2390), Expect = 2.2e-265
Identity = 476/482 (98.76%), Postives = 477/482 (98.96%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQ ETNT
Sbjct: 3   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQAETNT 62

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE
Sbjct: 63  EDKFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 122

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKE+AQKAIEELHGKEVKGKTIRCS
Sbjct: 123 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEELHGKEVKGKTIRCS 182

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 183 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 242

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSS NFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL
Sbjct: 243 CADYSRQKMSSTNFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 302

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ
Sbjct: 303 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 362

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKKPDGAYSHISGSH NHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM
Sbjct: 363 SDKKPDGAYSHISGSHPNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 422

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR
Sbjct: 423 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 482

Query: 481 PY 483
           PY
Sbjct: 483 PY 484

[Close]

BLAST of CmaCh06G009960 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 568.9 bits (1465), Expect = 3.8e-162
Identity = 305/499 (61.12%), Postives = 390/499 (78.16%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + ++  +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPG ENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +       +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmaCh06G009960 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 568.9 bits (1465), Expect = 3.8e-162
Identity = 305/499 (61.12%), Postives = 390/499 (78.16%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + ++  +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPG ENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +       +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmaCh06G009960 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 548.5 bits (1412), Expect = 5.3e-156
Identity = 301/500 (60.20%), Postives = 384/500 (76.80%), Query Frame = 0


Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVE-- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  --------TNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + ++  +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRN 240
           KE K   T  CSLS S +RLFIGN+PK+WTEDEF+++IE VGPG ENIELIKDP N +RN
Sbjct: 181 KEFKASSTANCSLSLS-NRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQVLEVVLAKPQSDKKPD-GAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGL 420
            GQ LEVVLAKPQ+++K D  +YS+ +       +H  +G +  +PYG++G G G+    
Sbjct: 361 NGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSF 420

Query: 421 HQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTS 480
            QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + 
Sbjct: 421 SQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG 480

Query: 481 RSGGSSSGDEVNRGRRYRPY 483
           R   S   D    GRRYRPY
Sbjct: 481 RD-NSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmaCh06G009960 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 538.9 bits (1387), Expect = 4.2e-153
Identity = 290/478 (60.67%), Postives = 371/478 (77.62%), Query Frame = 0


Query: 12  DLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVE-TNTEDNFSEDGRN 71
           D  E+  +EE +++ EE  D+D V  ++ E  E +VE+  +    +  + ++  +ED  N
Sbjct: 3   DEVEEEQVEEYEEEEEEDDDDDDVGNQNAE--EREVEDYGDTKGGDMEDVQEEIAEDDDN 62

Query: 72  NISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDLRDLCESLG 131
           +I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVFIGGL RDV EEDLRDLCE +G
Sbjct: 63  HIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIG 122

Query: 132 EIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCSLSDSKHRLFI 191
           EIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH KE KGKTIRCSLS++K+RLFI
Sbjct: 123 EIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFI 182

Query: 192 GNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMS 251
           GN+PK+WTEDEF+++IE VGPG        DP N +RNRGFAFVLYYNNACADYSRQKM 
Sbjct: 183 GNIPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLYYNNACADYSRQKMI 242

Query: 252 SANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNIPENTTTEQLKELFQQHGDVTK 311
            +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNIPENT+TEQLKELFQ+HG+VTK
Sbjct: 243 DSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTK 302

Query: 312 VNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPD-GA 371
           +  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D  +
Sbjct: 303 IVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSS 362

Query: 372 YSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPAGMQMVPMVL 431
           YS+ +       +H  +G +  +PYG++G G G+     QPMIYGRG MP GMQMVPM+L
Sbjct: 363 YSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLL 422

Query: 432 PDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYRPY 483
           PDGR+GYVLQQPG+PM   PP R RR++R++GS G + R   S   D    GRRYRPY
Sbjct: 423 PDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRD-NSHEHDGNRGGRRYRPY 467

[Close]

BLAST of CmaCh06G009960 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 395.6 bits (1015), Expect = 5.8e-110
Identity = 219/485 (45.15%), Postives = 321/485 (66.19%), Query Frame = 0


Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTED 62
           D  E EERVDL+ DN  EE+   +EE V+ + V+       EE++EE+ EE + E     
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIEEE----- 72

Query: 63  NFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDL 122
                    + +E  E  + + +  +E++ ++H +LLALPPHGSEV++GG+  D +E DL
Sbjct: 73  ---------VEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCSLS 182
           +  C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+  + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192

Query: 183 DSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNACA 242
            +KHRLF+GNVP++W E + K+    +GPG + +EL K+PQN  RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-TPDNSAASQVKALYVKNIPENTTTEQLKELF 302
           +YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+ASQVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQS 362
           + HG + KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKPD-GAYSHISGS--HSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPA 422
           D+K +     ++  S    N+     YG    SP+G+LGG+G +A   QP+++  G    
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSYG-MAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432

Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGR 482
           GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G +S SG   S D      
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471

The following BLAST results are available for this feature:

BLAST of CmaCh06G009960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	5.4e-161	61.12	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O60506	7.0e-44	33.33	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	9.1e-44	33.33	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	9.1e-44	33.33	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O43390	9.1e-44	31.91	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]

BLAST of CmaCh06G009960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBB5	1.1e-268	100.00	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1IHG4	1.1e-268	100.00	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1FDC4	1.1e-265	98.76	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1FD95	1.1e-265	98.76	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A1S3AUX7	9.6e-246	91.08	heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of CmaCh06G009960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974824.1	2.2e-268	100.00	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita maxima] >XP...	[more]
XP_022974823.1	2.2e-268	100.00	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita maxima]	[more]
KAG6597046.1	2.7e-266	99.17	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
XP_022938168.1	2.2e-265	98.76	heterogeneous nuclear ribonucleoprotein Q-like isoform X2 [Cucurbita moschata] >...	[more]
XP_022938159.1	2.2e-265	98.76	heterogeneous nuclear ribonucleoprotein Q-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh06G009960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00830.1	3.8e-162	61.12	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	3.8e-162	61.12	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	5.3e-156	60.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	4.2e-153	60.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.1	5.8e-110	45.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 282..355 e-value: 2.9E-18 score: 76.7 coord: 187..264 e-value: 1.3E-9 score: 47.9 coord: 107..180 e-value: 1.4E-28 score: 110.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 188..254 e-value: 3.2E-9 score: 36.5 coord: 108..178 e-value: 1.3E-22 score: 79.4 coord: 283..352 e-value: 1.3E-16 score: 60.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 186..268 score: 11.758731
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 281..359 score: 15.732639
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..184 score: 21.019814
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 107..180 e-value: 6.9E-8 score: 42.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 269..401 e-value: 9.1E-22 score: 79.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..186 e-value: 3.0E-31 score: 110.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 187..267 e-value: 7.4E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..482
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 2..480
None	No IPR available	PANTHER	PTHR48024:SF13	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Q	coord: 2..480
None	No IPR available	CDD	cd12251	RRM3_hnRNPR_like	coord: 280..359 e-value: 8.05256E-32 score: 114.644
None	No IPR available	CDD	cd00590	RRM_SF	coord: 108..180 e-value: 1.28293E-25 score: 97.7609
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 103..186
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 186..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G009960.1	CmaCh06G009960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding