CmaCh06G009240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G009240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	rhomboid-like protein 20
Location	Cma_Chr06: 6127113 .. 6139028 (-)
RNA-Seq Expression	CmaCh06G009240
Synteny	CmaCh06G009240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGCGGCCCCTCTGGTTTCAGTGCGTCCTCTTCAATTTCTCTCCTCTTCTGATGCTTAACCACCCACTTTCTCCCTTTTTCAATTTCTGTTCCACCTTGATTCATTTGCTCCTGTTCTTCTCTCTTTCGCAGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGTACTCTTCTCTCTCTTTCACTACCCAGATGCTTTTTCGCCAACTGTGGGTTGGTTTTATGTTCGAGACTAGGGTAGATTCGCTTCTTCGGTTAAGACGAGTCCTTTGCTTGGTTGAGTGTTTGACCTTCGATTCCGCGATGTATTGAGCATATACCCAGATTATAGATCCAACCGGCCGAGTTAATTGATGCATGATTGAAACTGGGGATCCTCTTTTCCTCCTGTATGTAATCACTTAGTTTAATCGACCATAGGGGCCTCTGCAATTCTGGTTTTGAATTGTATCTATCTTTAAGTAATTTTTTTTTTTTTTTTTTGTTGCTGGCTGGGGAAGGTGTAGCAGAAGTTGTCTCGTGGCTGGTTGTACGTTATGTGACTTGCCTATGAAATGTTTAGGTGTTCCTATCAGGAGATAATCCAAGTTCAGTAACATTTTTGGAGCCTGGTAGATATAAATTTTTGGTAGACTAAATAAGGATTAGTTCTAATTTGTGAAAAGAAGGTAGACTTTGGTACAGTCAGTTCCTAATTAAGTCATCTAATGAGATATTACATCATGTCCCTTCAATAAATCCCTAGAAAGAGGATCGTACTGACATGGGAAAAATAATTGTGAAGATTTTTGCATGAGCTTAGGAGATTTGGCACAATGTTATTGTCATCAAATTTGGATGAAAGAGGCAGGTTATTTTGAAGTAAAAGAACCTTAGTTGGTAACACCCATGGTCTTTCATCCTAAAGCTATGAACTAGTGTTGTGAAATTTTTGGAATTAAGATGGTGGGACGATATTTGGTTGGATGGGCAACTCTTGAATGACCCTTTTCCAATGTTATTCTCTGTTGCTATAAAAATTGGAGGTTGGATTAGGATTTTCAGGATTTGGAGACAAGAAACTGGAGATTGTACTCGGAGCTTAGAAGGAAGTAGCCGAATTTTCAAGGCTGATAGAGAGGTTAAATGTGGAACAATTAGGAATAAGAATAGCTCAAGACAATATAGCGTTAGTGCTATATGCTTCAAGGGAATTTTCAACAAGATCTATGCTATTTAAAATTTTAGTGGCAGAAACAATCTTGGCAGAGCATCTGATTAAAGGAAAAATAGCAAATATCCATATCCACATGTATCTATATATATACATATTCATTTATGGGTATGCCTTTTTAAGCTATATTAATATATATTTATTATTATTATTATTATTATCGGAGTAAGGGTCTCACTATTGCTATATGTTTTAAGCTTCTTCACTATATGATGGGCTTTTTATACTATAAAGAGTAATGCCAAACAATTACTCAGTGGTCAGGTACTTTAGAGAAAGGAGGCAGTGATTCCATTTTAGGAGAAATTTGGTTGGAGAGAAATTAAGGATTTGTATTAGACATAAGAAAAGGTGATGAGAAGGTTTTAACACTTGTTGTTGGTGCTCTTTGTTAAGCTCCCTTTTTCAGATACCTAAAGCCAAGTAGATGCATTAAAATGTGCCCGATCTCAAATATTCTCCCATGATTTGTCAATTTCTGACGAGATTCTTCTGTTCTTTTCAATCTAATATTTTACAAGATTGAAAAAACTAGCTTGCTAGAGTAAACAACTTCATCCCTAAACAAAGGACTCAAGATAGCTTCCTCTATCATTCCATGAAAACGTGAAATAAAAAACATAGACATGCTAGCAATCTTCCATAATCGAGACCAACATGGCAGCAAAAGGGCATAGCAACTATAATTATCTGTAGCCCCCTGCTCAAATGATAACAATTGGGGAAGGACAATACAAAATGGTGTGGCTAAAAAAGTAATAATTCTTTCTTAAGTGTCTGGAAAAGAACCATTTTTTTGTGAGATTGTAATCTTTTGAAGTTTTGAGAAGAAGTGAAGAGAAGAAAGGACTGGAGCATGGAGTAAAAAAAAACTAAATGATTGTTCTAATACTTGCAAGTTTATAACTACAAGGAGAAAGTCCATACATGACTATGTTTGTGTCTTACACTTTTATCCTTTTTTCTTCTTATATCATATTTTTGGGGCTAAGGAATGAGAAACACCTTTCCCTTGCATCATGATTTCAATTTCATTTCATTCGAAAAGATCCAAGTTTGTCTCAACAATGTTTTTGTCATTCCAATCGTGTTCCATTAATTAGGAACAACCAAGCTGATAAAATTTGATAACTCTCAGATGGAGAATTAGAATGAAAAATCCATTAGATGACAAATTTTGGTTCTAAGGCATCTCAGGCAGTGAATCAAATCCATGGTGCAAGGTTTTCTTATTAACATGCAATATTGATTTAGAAAAGTGAAGTGGAAATTGGAATTTATTTATATTTCTATAAACTAATATTTTTTTCATAATTTTTTTGTGTTGATAAGAAACAAGATATGATGTGTGGGAGGAAAGAAATATTTTCATGCACGATATGAAAATATTATGAAAGATGGGAGGAGAGCCAGGCACAAAACTTCCTGTTGCCCATGGGAACATTCAGGCTAGTGTAAAGGGTGGTACACCAATAAAGAGCCAAGAAAAGAGAACCAGATTTAAAAAACAATCAAAAGTCTCTTAGGCATCAGTATCATTGTTCCTTATTGGCCAATTCCTCCTATGAATAAAAGGACCTACCTTGAAAGAGTCTAGATATATGCAACCACAAAAGAAGAATTACAGCCAAAAAAGGCCAGAGAAAAGAGGGAGGAAGCTTCTATCTCCGTCAATATAAGTTTTTCAAAAGATTAGATTACGAACTATCTATGAGAGGCACTCCACTTCAAGCCCTATGCTGTATATTTCGACTCAATGTAATTTTTTTTGTAGCATCTTTATAAATCCCGTCGATTCTTTCCGACCCAAAATTTGAATACAAACCTTTAGAAATGGATACTGAAACAAGGAGCTTGCCTTTGTCCCTATATTGCTGTGGGTCTGTGAATGATTTCTACAATAGAAGTTTTAGATGAATGCTCTTTTATTACTTGGTGGTTACGGGTTTAATTTGAAAGGGAAAGAAGTTGGAACTAGTTTACTTGCTTGTAAAATTGGAAATGGGAGGTTCTTTGTACAGGAACCAGTATTTTATGAAATTCTTTATAAGATTCTAATATAATGAAGTCGCAGTGGTAGGAAGTTTTTGTTTAAAAGTTTGGACGGGACATGAATTTGAATAAGCTGCGCTAAAGGGATCCACTGGTAGAAATATTATTTTTATCATTTTAACTGCTGCTATTCCATCTTTGTTGCATATATAATCCTATTATATCGGACTTAAAGTCGACTTATTTTGTCCTTTTTCCATGATAGAGATTACCTTAATTTGTGTGGTAGAAAGGACACTTTTGACTAGTTAATTGTCATCTTTATGGCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTAAGTTTTATTCAATTCATACTGCAGGATTTTATTTAAACATGTCATAATGAAGCAACCAATCACGATCTTTAAATTGATGGCTCACATTAATACAATGCAGTGCCTGATGTATTAACTCTTGTAACCATGTATTTGTTTATCTTCAATGAATAGAAGCATAAAAAATCAGTAAGTGTATAAAAGTAGATGTAGTATAAGTTTTGTGGTCATACATGTCATGCCGTATTCATTTGGAATACTAAAAATGGTATTGAATTAATACTATGCCCCTTCTGATAACATACTAATCTTCCTAACATATCCATTACTAGTACTGACAACATTTTTGTGGTCATTGACATGACAAAGTGGGCACCTATATTTGAAATAGTATATTGTTTTTCATTTCTATTTGCTTCATAGAATAAGGTTAGCAGACTGAATTTAGTACGATCATTGCCTTTAGTTTCTATTCTAGAAAACAGATACGTTTGGGTCAGGAAGTGTGAGAGCATGCTAATATTGATGGTGATAATTTGTTAATTATAACTTTCTTCACTCCAATTGTCAAACATATTATGTTTCAGTTTTTGTGCTCAAAACTCTTTTTCCCCCCTTAGTTGATGTGTATTTCTTCGTAAAAAGATTTATGTTAATATTCTGTTGTTTTGCAGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTGGTTTAATCTACTAATATGCTTGGGCAGCTAGTACACAAGCTCATGTTTGATTATTGGTTTGATGTTGTTTAACATCCCTTTCCTTTTTAAATTTTTAGAGGTGAACTCTCCTTCTTTGATTCTTTTTCTCCTGTAAAATTTGTTAACTTGGATTGGAAGTCCTTCCTGATCTTTCTGACATTTTCGCTTGTAAGCCTTTTTATACCCATCTAGTTTCTTCTCTCTCTACTTATCTCTTCAGAAACCTTTGAAAGTTGATAATCCGAATGAAATTCCATTTCTTTTTCCCTGATTGATGGCTTTAGGAAGAATTAACACCTTGGATTTTATCCAGAGAACCCATTACGTTGTCCTTGGCCCCAATTGGTGCTTTATGTGCAAGGGGCCTTGAGAAGATTTTTAACCGTTTGTTATGGCTTTGTTTGCTTGCTTCTCTGTTGTGGAGTCAGTTTTGGCATATTTTTGGTTCCTACCTGAACGTCTGTATGATGGTGGTGCGACATTTGATCCTCCATTTTGGGATAAAGACTGTTATTGCAAGCTTGCTTTTGTGTTGTTCTTTGAAGTATTTGGTTTGAAGGAAACAGGAGAGCCTTCATGGTTTTAGAACAGTTCCTTCCTAGACATCTTCTGACCACTCCTCTTAAGATATCTTAATTCTACGAGTCTTGAATCAAACAGCCACTTAAATTTGAGAGCTAGATGGAGATGGTGAGGTAGATCTTTGATTATTATAGGAGTTTTTACAATCGGAGGGAGCGAAGGGCTAGGTTTTATTTATTTTTTTTATTTCAAGGGTTGAGTAGTCACTTAATCCTTCTATAATTTTTGGTATTTTCATTCATATCTCAACTATACAGAATATCATAATAAATTCAAGGTACAGCAACTTATAAAAGAATGAATATTTTGCCATAAACCAAATCTTAAAACATACCTAAAAAAATACAAAATAAAGATGAGATAAAATCCTAAAATACGAGAAACAAGGTTACCCTTAACTTTGACCATAATTTACAACACTCCCCCTCAAGGTGGATTGAATATATTATACAATCCCAACTTGCTATTCAAATCTTCAAGGTTAGGTCATGGCAAAAGCTTGGTAATAATATCTGCTAATTGTTGCTTGAGAATGGATGTGGACATAGACACTACGCTCGAAAACTCTAGGAACCAAATCAAGAGATTGAACACAAAGATGAGGAAAAGATTGAAGGAAGACTTAATGAGGAGCAAGTATGTGGGATTGATCAATTATGTGGAAGTGAGATGACCATTCTTGCATTAAGCCACTCCATTTTGTTGATGAGTATCAACACAAATGCCAAGATGAAGAATTCCTTGAGTGATAGGTAATCCTCAAGACATGAACTAAAGAATTATTTTGCATTGTCTATTTTGAGGACACAAAATTTGGTTTGATGTTGAGCTTTTGATCATATTAGGAAAATGTTTGAAATGTTGGTGAGCTTAAGATTTTTTTTTCTTAACAAAGATCCATGTAACATAGATCATCAACAAAGGAAATAAGCTGTCGAGCCACAAAGATATTTTTTGAAGGGTCCCATACATTGCTATCAATAAATGAAAAAGGACTTGACGGTTAAGCAATGTATGGATAGGGGTTTCAAGAATGCTTGATAATCTGAAAAATATCATAATTGAACCATGTAAGATTTTTATTATGAAGAAGATTTTGAAACAATTTGGAGAAATACGAAATATTTGGATGACCTAACTGATCATTTCACTATCTTTGTTGATACAAGAAGAAAACTGATTACTGGAAACAAAGGAAGATAAAAACTAAGAATTGTTTCCAATTGCTAGTGAGCCTTGATCATAGTTGAGAGGATAAAGTCTGAAAAAGTTTAGCACTGCCAATTGTCTTATCCAGTTCGAGTTCTGCATAAATACGTTAGTTTGGATTAAACTTAATCACACATTTAAGATCACGTGTCAATTTACTTAATGAAAGTAAATTACAACCCAAGTCTAGCATATGTTATACAGAGTTAAGATATAAATTTTGAGTAACACTAATGGAACTTGTCCCAACCACTTTGGAGTTTGACCCATTTGCAATTTTCACAAGGAATTGGAGGTGCCGACTTGATAGTTTTGAAATAGTGATGCATTCCTTGTCATATGATATGATGCTCCAGTGTGTCTACAATTCAATTCCTTCCTTTACTAGTTAACAAAGCAGGAGGCATAACTTCCTATGCAGCCAGTATTGCTCCCTGGCCAATGATCTTTTGTTTTGCATCTATTTGTTATTTGCTAAATGGTGTTGACTTCGAATTGTCAGAATTATCTGGAGCTACGTTAACCACATAGGCCCTACCATCATGATCATTGTGATGCTTAGGTTTCCAATTAGCAGGCTTCCCATGGATCTTTTAGCATTTCTTTTATATTACCCACCGTTTTGCAATGCTCACACCGAGGCCTCTCTTGTTTTTGCTTTTTGTCACTTTGTACCATTGAGTTAAAACTACACTAGCAAGTACAAATGCTATCAAGAAAGTAGAGACTGATTCTGATTTGCCCATTATTGCACATTTCCTACTTTCTTCTCGCCTTACTTCAGATAAGGCTTTGCGAAGAGTTTGGCAATGACTTGGTTCCCATGTTTCGACCTCGAACTTCATCAAGATCGTTGATAAGGCCAAGAAGGAATTTGAGTGTCTCTTTTTGCTCAAGAATTTCCGTTTATTGAGTTGTATCATTGGCATACTTCCATGCATAGACTTCAAATAAATCCACTTTTTTCCAATGATTGGAGAGAGTATTAAAGTAATCAGTAACAAATTGATAACCTCAGCAAAAATCATGAAGGATTGTTTATATCCTAAACAATTCTGAAGTGTTCTTCTTACTAGAGTATGTTTCCTTGAGATTTTCCTAAATTTGATGTGTTTTTCCATACAGAAGAAAATTTTCACTTATCTCATTGGTTGTGTAATTAATTAACTACAACATGACCATGTTATTTTATACTTTCCACTTCATGAATTCGGGATTAGTTGCTTTAGGCTGCACAATCTCTTTCGAGAAGTACTCATTCTTACCCTTGCCACATATGAACATCAAGACTGACTATGACCATGGGATATAACGTGACCATTCAATGTGTGACCCGTAATATGGGCAAATGATGATGAATCATATCCTCCTTGACCATTAGAGATTGGTTCGATTGATTTGGAAGAATACATACTCATGAAAAATCGGACAAAATGTAGTAGTGAAGAACTAGGTCAAAAAGAAAAAATTGCAGCAATTAGGCCGACAACAGTCTTCAGCTATAAGCAGTGACGATGTCAGAGGAGCCGGACATTAGTGATGGAGGAGTCAGCGTCGGAGGAGGGTGCTTCAGTCGCGAGTCGGTATCGAATGTGGGTGGTAGTCAGAAACAAGGACTATTGACCATTAACCTTCTGTGGTAGTTTGATTAGTTGGAAAAGCCTTTTGGCCTTTGCATGAACGGTTTTATTGGTAAATTTATAAAGGTTAATAGGAGGTGGTTGAATAAGTTATTGTAGCATATTTCTTGAATTTGAAAACAGATGTTAAAGCGGACATTAGTATCTCATTCCTTGGAAAACTGATTTCATCTAGATTAGGAACTTTATTGCTTTTTTAGCCTTTACAGTCATACAAAGATTGAAGATTCTATCATGGGTTGCTCCCAAACAAAGTTTCGATGGCTTGTTTCAGCTTACTTTACCTATAGTGCCTTCGTTGTTGGTTTGTCCAAAATGTTATAGTTCAATCCGGTGGCTGCTTTTGTTTGGAAATTATTATTATGTATTCCTTTTAAATTTTGAATATATATATAATCATTTTCTTAAAAATTGAGGTCTGAACTTGTGCTTGGTTCGGGATGGAGAAATGAAATACACAATAACTAAGAAATTTCAAGATCGGGACTAGATGTAGTGGCATAGATAATAAAATTATGTAATTATAGTTGAAGAAAATTCAAGATCGGTACTAGATGTAGAATAGATGATAAAGTTTATGTAGTTATAATTTAAAAAAATTGGTTGCAGTTTGGTTTTGATCTAGATGAAAGTAGATATGTACTAAAAATATGTAATAAGATTTATAAAATATGGAGTTGGGGTTACAGCTGAGATGTGGATGAAGACGTGAAATACATAATAATAATAATAGTTTCCTTTATAAAAAACACAAAAACGAAGGATTGAGGTTGGATTTGATGCTGGAATGGAGTTCATCGGGATGAGGTTTAGACAGTGGAATACATTATAAAAGTTTTAAGAATGGGGCCACAGTTGGGGAACAGAGAGAGAAAATGAGATGGGGGGAAGGGGGAGAAGATCTTCATTTAGTTGGTATCTGGTTTTAACTCTCATCATTTTCTCATTGGACATAAGTTATGTCTGCAATTTTGCAATAGAAGTTTTATTATTAATTTTTATCCCATCTTGTTAACATTGGAGTTCATTTTTGTTGCATCTTACATTCAGAAAAAAATTTATCAATTCATTTTTTCTTTTTCTTTCACAGATTTTAGCATTAGAATCTTAGGGAGAATATATATTTTAGCATTAGCAGTAAGTTCTAATGATTTTGACTTGGCTAACACTTTTTTTTTTTTTCTTTTGGTGCAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGGTTAGGAGTTTGCTTTATATATATTTGTTTTGATACCTCTTTTGTTTCTCTAGCTGTATAATCTAGTTTGTTGTTGATCTTGCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGGTTAAATTCAAAATTTGCATAAACACATTGCTTCCTTAGTTTTTTATCTGAAATTATGATTCTGGTATATTAAATTGTAGTTGGGGCTTTTCAGTATTTGGTTAAACTGTGGAAATTAAACTCAGGATAGGTGGTTAATGGCCCGTCAACCTTTACTATTTTAGAAGGGATGAATTATGAATATTTTGATACCTTTTCTCACTGCACGCATATACAGGATTCTTTATGAGTTAAAATCTTCATTTGAGTTTTTGATTAGCTAATTACCATCAGCCTCCAGGTTTTGTCTCCCAACAATAAATGCTCCTATTCTTAACATTTTGAATTGAATTGGTACATCTTCCAATAATATTCTGGTTGGTTATGGAACAGACCATTTGGCTTGGCTTCATCTTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTGTAAACCTATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGACTGCCTTCGTTCCTTCGAGGAGGCTTGACTCCTTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTGCCAATCTCTTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACATCTGTCTTCAAATAATATAAGAGGTGTTTCTTATCCGAAGAAAAAAAAAATGAATGATAGGATCTGTCTTTCGTGCTCAAATTGTCTGATTACTTCTACAAATCTCGTCCTCTTAAAGCTTCGTATATATTGACAGACTTACAAGATCTTCTATAATATTCTGATGTTAGAAACTTTGATCTTTTGTATGATGATTTCATTCTTTTAATTGTTTTCGGTTCATTTTGAGTCAGTTTGATGAAGGTTCTCTTATTTTTCTATCATTAGGTAATTTGTAATTTTCTAAAGAATGTTATTGTATTATCTTCGTGCTTCACAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATCTGCTATTAGTTTCAACATATTTTGATAAGCTACACCATTTGAGGAAGAGATGTTGACTATTTAATAGATTTCTCGTCTGCTGACCAACTTTTAGGCATGAGACTGTGCCATCGTAATTGTGAGATTGTGGGTACTTGCTAACGTTATAGTCCTTAAAATAATCTATTTGGATGTAGTTAACGAGTACATGGGTGGCATGAAAAACGCAAGTTTTGCACTTCAGTCTCTTAACTGGTTTATTTTGTGTTGTGCTATTATAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

mRNA sequence

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAATTTCATGAAAAAAATTCTGGGTATTATAACCTTTGATCTCCACAATTCCGAGAACAATCAAATTCGGTATCAAGGGATGATGGTCGGACAAACTTGCATTTGCTGACATCTGAGTTTTGATAGGTTGCAGGAACTCACCATGCAATTTTCAATAACTCGTACGGGTTCCCTCTCTATTCCTCTTATCTATCGTAGGTGTGAAATGTTCTTGCTACGTGATGTCTGATTACAAAAAAATTGCTTAGCCTGGCCTGTAGGTATTAAGCTAAGTATTAAATTAAGTTGGCAGAGATGTTTAAGGAAGCAGATGTGCAGAATTCTCTTGTTCTGTGATTATCTGTATAAAAGTTGCATATTCTTACACAAGTTTTATTGGGGCACTATCAAGCAAGATGAACAATTCTGTTTTTTCTCTTGGTAAGTTATATTTTGTATGATTTATTGGTTGGTTTCATTTTTGGTTTTGAGAAG

Coding sequence (CDS)

ATGAGCGGCGGCCCCTCTGACAATGCCCCTGTCACCCGGACCTTCATCATTGCCTCCGCCCTTTTCACCGTTTTCTTCGGGATCCAAGCCCGCTCTATTAAGCTTGGCTTGTCCTATCAGGATGTGATTGTGAAGCTTCGCTTTTGCAAGTTAGTGATGTCAGTCTTTGCCTTTTCATCTACTCCTGAATTGTTGTTCGGACTGTTTTTGCTTTATTACTTCAGAGTATTTGAGAGACAGATAGGCTCCAACAAATATTCGGTCTTTACCTTGTTCTCTATTATAATCTCCCTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCCACTGCTGTCAATCTAGTCACTTCTGGACCTTATGGTCTTTTATTTGCTTCCTTTGTACCTTTCTTCTTTGATATTCCTGTTTCAACTCGGTTTCGTGTACTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTTGCTGGTCTTCAGCTCCTTCTGTCCTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGCATTCTTGCTGGTTCCTTATATCGTTTGAATGTAATTGGCATCCGCAAAGCCAAGTTTCCGGAGTTCATCAGTTCATTTTTTTCGCGATTTTGTTTGCCATCTGTGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTCGAGGAAATATGCCATCATTCATGAGCCGCCAGGTTGAGAGGAACTTCACTCCTGTGCCAACTGCCTCAGAACCACCTGAGGACTCCATTGCTACCCTTGTTTCGATGGGCTTTGACAGAAATTCAGCCAGGCAGGCACTTATGCGGGCCAGAAATGATGTTAACATGGCAACCAACATCCTTCTTGAATCACAATCGCACTAA

Protein sequence

MSGGPSDNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAFSSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH

Homology

[Close]

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot
Match: Q9LET3 (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot
Match: Q8RXQ2 (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-100
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot
Match: Q5ZJQ8 (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.8e-18
Identity = 84/334 (25.15%), Postives = 149/334 (44.61%), Query Frame = 0


Query: 9   APVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVK--LRFCKLVMSVFAFSSTPELLF 68
           AP++++ ++  +  ++   +  +  +   +Y    +K   +  +LV          +   
Sbjct: 13  APLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICLDLKDTFC 72

Query: 69  GLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNLVTSGPYGL 128
              L+Y FR+FER+ GS K+S F L +  +S LF++L +   +      +N + SG  G 
Sbjct: 73  SSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSLPSGFLGP 132

Query: 129 LFASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSL 188
           +FA FVPF+  IP     +VLG    ++K+ +Y+ GLQLL S     IL  + G+++G  
Sbjct: 133 VFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALSGLISGIC 192

Query: 189 YRLNVIGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPS-----------FM 248
           Y  +++ + +    P +++  FS    P   +  A P  ++R  M +            +
Sbjct: 193 YNSSILKVHRILCVPSWVAKIFSWTLEPIFSS--AEPTNEIRVGMGATVDIQRQQRMELL 252

Query: 249 SRQV---------------------ERNFTPV------------------PTASEPPEDS 289
            RQ+                      R F P+                  P  +E  E+ 
Sbjct: 253 DRQIMMSQVAQMRRQRQQQGGMINWNRLFPPLRHRHNENYQDHHPSDQDTPPPTEVSEEQ 312

[Close]

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot
Match: Q4R910 (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 77/275 (28.00%), Postives = 124/275 (45.09%), Query Frame = 0


Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L +  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPS-----------F 249
            Y   +  + +    P +++ FFS    P   +  + P  + R  M +            
Sbjct: 196 CYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSS--SEPTSEARIGMGATLDIQRQQRMEL 255

Query: 250 MSRQV---------------------ERNFTPV------------------PTASEPPED 289
           + RQ+                      R F P+                  P   E  E+
Sbjct: 256 LDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPPLEVSEE 315

[Close]

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot
Match: Q8NBM4 (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 77/272 (28.31%), Postives = 122/272 (44.85%), Query Frame = 0


Query: 70  LLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLK-DPAATAVNLVTSGPYGLLF 129
           L+Y FR+FER+ GS K++ F L S ++S LF+ L I  ++     TA + + SG    +F
Sbjct: 76  LIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASNLPSGFLAPVF 135

Query: 130 ASFVPFFFDIPVSTRFRVLG-VRFSDKSFIYLAGLQLLLSS---WRRSILPGICGILAGS 189
           A FVPF+  IP     ++LG +  ++K+ IY+ GLQL  S    W    +  I G+++G 
Sbjct: 136 ALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----IVAISGLMSGL 195

Query: 190 LYRLNVIGIRKAK-FPEFISSFFSRFCLP--SVGNPPAAP-------------------- 249
            Y   +  + +    P +++ FFS    P  S   P +                      
Sbjct: 196 CYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDIQRQQRMELLD 255

Query: 250 -------------NRDVRGNMPSF------------MSRQVERNFTPVPTASEPPEDSIA 289
                         R  +G M ++            ++ Q  R   P     E  E+ +A
Sbjct: 256 RQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPLEVSEEQVA 315

[Close]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL
Match: A0A6J1IAY9 (rhomboid-like protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111472941 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.3e-154
Identity = 291/294 (98.98%), Postives = 292/294 (99.32%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           MSGGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF
Sbjct: 1   MSGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL
Match: A0A6J1FC34 (rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.4e-151
Identity = 286/294 (97.28%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL
Match: A0A6J1DN01 (rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 8.1e-139
Identity = 267/295 (90.51%), Postives = 278/295 (94.24%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KL+MSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSI+ SLLFEVLAISLLKDP   AVNL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDP---AVNL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPP-AAPNRDVRGNMPSFMSRQV 240
           GILAGSLYRLNV GIRKAKFPEFISSFFS+F LPSVGNPP AAPNRDVRGNMPSF  RQV
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQV 240

Query: 241 ERNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ERN+  VPTA+EPPEDSIATLVSMGFDRNSARQAL+RARNDVNMATNILLE+QSH
Sbjct: 241 ERNYPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL
Match: A0A5D3D5B1 (Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00390 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.8e-138
Identity = 265/294 (90.14%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL
Match: A0A1S3CMQ9 (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.8e-138
Identity = 265/294 (90.14%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAISLLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSR  LPS GNPPAAPNRDVRGNMPSFMSR VE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+   P+A+EPPED+IATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CmaCh06G009240 vs. NCBI nr
Match: XP_022974301.1 (rhomboid-like protein 20 [Cucurbita maxima])

HSP 1 Score: 554.7 bits (1428), Expect = 4.8e-154
Identity = 291/294 (98.98%), Postives = 292/294 (99.32%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           MSGGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF
Sbjct: 1   MSGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. NCBI nr
Match: XP_022936013.1 (rhomboid-like protein 20 [Cucurbita moschata])

HSP 1 Score: 544.7 bits (1402), Expect = 5.0e-151
Identity = 286/294 (97.28%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. NCBI nr
Match: KAG6596983.1 (Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543.9 bits (1400), Expect = 8.5e-151
Identity = 285/294 (96.94%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAG+QLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGIQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. NCBI nr
Match: XP_023539609.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.0 bits (1395), Expect = 3.2e-150
Identity = 284/294 (96.60%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAI+LLKDPAATA NL
Sbjct: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAITLLKDPAATAANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV GVRFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAKFPEFISSFFSRFCLPSVGNPP APNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKFPEFISSFFSRFCLPSVGNPPGAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH
Sbjct: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 294

[Close]

BLAST of CmaCh06G009240 vs. NCBI nr
Match: XP_038904170.1 (rhomboid-like protein 20 isoform X1 [Benincasa hispida])

HSP 1 Score: 506.1 bits (1302), Expect = 2.0e-139
Identity = 267/294 (90.82%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVTRTFIIASALFT+FFGIQ RSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFLKLVMSVFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGLFLLYYFRVFERQIGSNKYSVF LFSII SLLFEVLAI+LLKDPAA   NL
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAIALLKDPAA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           VTSGPYGLLFASFVPFFFDIPVSTRFRV G+RFSDKSFIYLAGLQLLLSSWRRSILPGIC
Sbjct: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVFGLRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GILAGSLYRLNV GIRKAK PEFISSFFSR  LPSVGNPPAAPNRDVRGNMPSFMSRQVE
Sbjct: 181 GILAGSLYRLNVFGIRKAKLPEFISSFFSRLSLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           RN+  VPTA+EPPEDSIATLVSMGFDRNSARQAL++ARNDVN+ATNILLESQSH
Sbjct: 241 RNYPSVPTATEPPEDSIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CmaCh06G009240 vs. TAIR 10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-113
Identity = 212/296 (71.62%), Postives = 247/296 (83.45%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS   NAPVT+ F+I SALFTVFFGIQ RS KLGLSYQD+  K R  KL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVF LFS  +SLL EV+ +SLLKD   T  NL
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKD---TTANL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPYGL+FASF+PF+ DIPVSTRFRV GV FSDKSFIYLAG+QLLLSSW+RSI PGIC
Sbjct: 121 LTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGN-PPAAPNRDVRGNMPSFMSRQV 240
           GI+AGSLYRLN++GIRKAKFPEF++SFFSR   PS GN PP AP+R++ G +     R+ 
Sbjct: 181 GIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRA 240

Query: 241 ERNF-TPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
           ER+   P+P++ EP E++I TLVSMGFDRN+ARQAL+ ARNDVN ATNILLE+QSH
Sbjct: 241 ERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CmaCh06G009240 vs. TAIR 10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-101
Identity = 194/294 (65.99%), Postives = 232/294 (78.91%), Query Frame = 0


Query: 1   MSGGPS--DNAPVTRTFIIASALFTVFFGIQARSIKLGLSYQDVIVKLRFCKLVMSVFAF 60
           M+GGPS  +NAPVT+ F+IA+ALFTVFFGI+  S KLGLSYQD+  K R  KL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELLFGLFLLYYFRVFERQIGSNKYSVFTLFSIIISLLFEVLAISLLKDPAATAVNL 120
           SST +LL GL+LLY+FRVFERQIGSNKYSVF  FS  +SL+ E + +SL KDP A   NL
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTA---NL 120

Query: 121 VTSGPYGLLFASFVPFFFDIPVSTRFRVLGVRFSDKSFIYLAGLQLLLSSWRRSILPGIC 180
           +TSGPY L+FASFVPFF DIPV+ RF VLGV FSDKSFIYLAG+QLLLSSW+RSI  GIC
Sbjct: 121 LTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGIC 180

Query: 181 GILAGSLYRLNVIGIRKAKFPEFISSFFSRFCLPSVGNPPAAPNRDVRGNMPSFMSRQVE 240
           GI+AGSLYRLN+ GIRKAKFPEF++S FSRF LPS+ +    P R      P+   + V 
Sbjct: 181 GIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVR 240

Query: 241 RNFTPVPTASEPPEDSIATLVSMGFDRNSARQALMRARNDVNMATNILLESQSH 293
               P+P+ +EP E++IATLVSMGFD+N+ARQAL+ ARNDVN ATNILLE+ SH
Sbjct: 241 AYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

The following BLAST results are available for this feature:

BLAST of CmaCh06G009240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LET3	2.1e-112	71.62	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
Q8RXQ2	3.2e-100	65.99	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
Q5ZJQ8	6.8e-18	25.15	Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBA...	[more]
Q4R910	7.1e-15	28.00	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
Q8NBM4	1.6e-14	28.31	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]

BLAST of CmaCh06G009240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAY9	2.3e-154	98.98	rhomboid-like protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111472941 PE=4 SV=1	[more]
A0A6J1FC34	2.4e-151	97.28	rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111442736 PE=4 SV=1	[more]
A0A6J1DN01	8.1e-139	90.51	rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=...	[more]
A0A5D3D5B1	1.8e-138	90.14	Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CMQ9	1.8e-138	90.14	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]

BLAST of CmaCh06G009240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974301.1	4.8e-154	98.98	rhomboid-like protein 20 [Cucurbita maxima]	[more]
XP_022936013.1	5.0e-151	97.28	rhomboid-like protein 20 [Cucurbita moschata]	[more]
KAG6596983.1	8.5e-151	96.94	Rhomboid-like protein 20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023539609.1	3.2e-150	96.60	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]
XP_038904170.1	2.0e-139	90.82	rhomboid-like protein 20 isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh06G009240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56740.1	1.5e-113	71.62	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	2.3e-101	65.99	Ubiquitin-associated (UBA) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 251..288 e-value: 2.6E-10 score: 50.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 251..286 e-value: 1.3E-11 score: 44.2
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 249..289 score: 15.028895
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 7..189 e-value: 2.4E-6 score: 29.5
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 7..187
None	No IPR available	GENE3D	1.10.8.10		coord: 248..292 e-value: 2.5E-13 score: 51.6
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 245..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G009240.1	CmaCh06G009240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity