CmaCh06G009170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G009170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin-responsive protein
Location	Cma_Chr06: 6070153 .. 6070717 (+)
RNA-Seq Expression	CmaCh06G009170
Synteny	CmaCh06G009170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAATTTCTGTTCCATTTGGGCGGCTCTTCCTGTCCCCTCCTCTGTCCCCTCTCCCCTTTCCCTTTGCCGCTCTCTGCCCCCATTCCCACCGACATCTCCTTCTTCATCTTATCTATAAAACCACCCTTCCATTTCCAGCCTTTTCTGCTCTCACAAACCAAAAAATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTAAGTGCCGTGTTTCGATTTTGACTCTTGTAATGGTTTTTGGGGCTCTGTTTTGATTCTCAATTTGTGTTTTTGTAGGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

mRNA sequence

TTCAATTTCTGTTCCATTTGGGCGGCTCTTCCTGTCCCCTCCTCTGTCCCCTCTCCCCTTTCCCTTTGCCGCTCTCTGCCCCCATTCCCACCGACATCTCCTTCTTCATCTTATCTATAAAACCACCCTTCCATTTCCAGCCTTTTCTGCTCTCACAAACCAAAAAATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

Coding sequence (CDS)

ATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

Protein sequence

MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY

Homology

[Close]

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-24
Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNS----CGVRTNKRNL-------------- 60
           M+S++ F++ LNL+AT+LRLGLPG +   DN+      +R NKR +              
Sbjct: 1   MESRVVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKAS 60

Query: 61  --QNH----SAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL 108
             Q H    SAPPPK+++VGWPPIRS+RKN++           EG GI+VKVSMDGAPYL
Sbjct: 61  HHQQHVETVSAPPPKAKIVGWPPIRSYRKNSV--------QEGEGDGIFVKVSMDGAPYL 120

[Close]

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-23
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 6   SFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRN-----------------LQNHSAP 65
           S++  LNL+AT+LRLGLPG D   +     R+NKR+                  +++  P
Sbjct: 7   SYEKELNLKATELRLGLPGSD-EPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVP 66

Query: 66  PPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P K+QVVGWPPIRS+RKN +  KK E    +EG G+YVKVSM GAPYLRK+DL VYK Y
Sbjct: 67  PAKAQVVGWPPIRSYRKNNVQQKKEE---ESEGNGMYVKVSMAGAPYLRKIDLKVYKSY 121

[Close]

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.5e-23
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 11  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQ 70
           +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 71  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGAPYLRK+DL  YKGY
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNE--SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGY 116

[Close]

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22
Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 11  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWP 70
           +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWP
Sbjct: 11  VNLKATELRLGLPGTEETV--SCG-KSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 70

Query: 71  PIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P+RS+RKN +  KK+E    +EG G YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 71  PVRSYRKNNVQTKKSE----SEGQGNYVKVSMDGAPYLRKIDLTMYKQY 112

[Close]

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20
Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 6   SFQNHLNLEATQLRLGLPGID---------GSADNSCGVRTN--------KRNLQNHSA- 65
           S++  LNL AT+LRLGLPG D         GS   S   R++        K N+ + S+ 
Sbjct: 3   SYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSD 62

Query: 66  ------------PPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPY 108
                        P K QVVGWPPIRSFRKN+L  KK E     +G G+Y+KVSM GAPY
Sbjct: 63  STTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVE---QGDGTGMYLKVSMAGAPY 122

[Close]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL
Match: A0A6J1IH86 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111472949 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.9e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL
Match: A0A6J1IED3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111474863 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.9e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL
Match: A0A6J1HCQ7 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGTDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL
Match: A0A6J1EUG2 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111436742 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.4e-42
Identity = 92/111 (82.88%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVG 60
           MDS+ S    LNL AT+LRLGLPG     DGSADNS GVRTNKRNLQN SAPPPKSQVVG
Sbjct: 1   MDSKPS---DLNLGATELRLGLPGTAAESDGSADNSSGVRTNKRNLQNDSAPPPKSQVVG 60

Query: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           WPPIRSFRKNTLLPKKTE+TTAAEGGGIYVKVSMDGAPYLRK+D+G+YKGY
Sbjct: 61  WPPIRSFRKNTLLPKKTESTTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGY 108

[Close]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL
Match: A0A6J1KIN8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111494790 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41
Identity = 92/111 (82.88%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVG 60
           MDS+LS    LNL AT+LRLGLPG     DGSADNS GVRT KR LQN SAPPPKSQVVG
Sbjct: 1   MDSKLS---DLNLGATELRLGLPGTAAESDGSADNSSGVRTYKRILQNDSAPPPKSQVVG 60

Query: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK+D+G+YKGY
Sbjct: 61  WPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKIDVGLYKGY 108

[Close]

BLAST of CmaCh06G009170 vs. NCBI nr
Match: XP_022974309.1 (auxin-induced protein 22B-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.2e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. NCBI nr
Match: XP_022975486.1 (auxin-induced protein 22B-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.2e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. NCBI nr
Match: XP_022961610.1 (auxin-responsive protein IAA4-like [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 3.0e-53
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGTDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. NCBI nr
Match: XP_023539614.1 (auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.6 bits (553), Expect = 5.1e-53
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDSQLSFQNHLNLE T+LRLGLPGIDGSAD+SCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSQLSFQNHLNLEDTELRLGLPGIDGSADSSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. NCBI nr
Match: KAG6596988.1 (Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.9 bits (551), Expect = 8.7e-53
Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 0


Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60
           MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGTDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           RSFRKNT LPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Sbjct: 61  RSFRKNTFLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 107

[Close]

BLAST of CmaCh06G009170 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 107.8 bits (268), Expect = 5.3e-24
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 11  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQ 70
           +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 71  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGAPYLRK+DL  YKGY
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNE--SEHEGQGIYVKVSMDGAPYLRKIDLSCYKGY 116

[Close]

BLAST of CmaCh06G009170 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 107.1 bits (266), Expect = 9.1e-24
Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 11  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWP 70
           +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWP
Sbjct: 11  VNLKATELRLGLPGTEETV--SCG-KSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 70

Query: 71  PIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P+RS+RKN +  KK+E    +EG G YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 71  PVRSYRKNNVQTKKSE----SEGQGNYVKVSMDGAPYLRKIDLTMYKQY 112

[Close]

BLAST of CmaCh06G009170 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 54/106 (50.94%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 9   NHLNLEATQLRLGLPGI--DGSADNSCGVRTNKRNLQN----HSAPPP-KSQVVGWPPIR 68
           N LNL+ T+LRLGLPG   +   + SC VR+N +   N     SAPPP K+Q+VGWPP+R
Sbjct: 5   NGLNLKDTELRLGLPGAQEEQQLELSC-VRSNNKRKNNDSTEESAPPPAKTQIVGWPPVR 64

Query: 69  SFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           S RKN      +           YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 65  SNRKNNNNKNVS-----------YVKVSMDGAPYLRKIDLKMYKNY 98

[Close]

BLAST of CmaCh06G009170 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 51/108 (47.22%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 9   NHLNLEATQLRLGLPG----IDGSADNSCGVRTNKRNL-----QNHSAPPPKSQVVGWPP 68
           N LNL+ T+L LGLPG    I    + SC    NKR       +  S PP K+Q+VGWPP
Sbjct: 7   NELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPP 66

Query: 69  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +RS RKN                  YVKVSMDGAPYLRK+DL  YK Y
Sbjct: 67  VRSSRKN-------------NNSVSYVKVSMDGAPYLRKIDLKTYKNY 101

[Close]

BLAST of CmaCh06G009170 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 84.3 bits (207), Expect = 6.3e-17
Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 14  EATQLRLGL-PGIDGSAD-NSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPK 73
           E   L+L L     G  D N+ G    K  L++ S PP K+QVVGWPP+R++RKN +  +
Sbjct: 35  ETVDLKLNLQSNKQGHVDLNTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQ 94

Query: 74  KT-EATTAAEGGG---IYVKVSMDGAPYLRKVDLGVYKGY 108
           K+ EA  A   GG    +VKVSMDGAPYLRKVDL +Y  Y
Sbjct: 95  KSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSY 134

The following BLAST results are available for this feature:

BLAST of CmaCh06G009170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32294	2.3e-24	48.85	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
O24542	4.4e-23	49.58	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
Q38822	7.5e-23	50.88	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
P33077	1.3e-22	53.21	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
O24543	3.5e-20	46.21	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]

BLAST of CmaCh06G009170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH86	5.9e-55	100.00	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111472949 PE=3 SV=1	[more]
A0A6J1IED3	5.9e-55	100.00	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111474863 PE=3 SV=1	[more]
A0A6J1HCQ7	1.5e-53	97.20	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1	[more]
A0A6J1EUG2	3.4e-42	82.88	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111436742 PE=3 SV=1	[more]
A0A6J1KIN8	2.2e-41	82.88	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111494790 PE=3 SV=1	[more]

BLAST of CmaCh06G009170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974309.1	1.2e-54	100.00	auxin-induced protein 22B-like [Cucurbita maxima]	[more]
XP_022975486.1	1.2e-54	100.00	auxin-induced protein 22B-like [Cucurbita maxima]	[more]
XP_022961610.1	3.0e-53	97.20	auxin-responsive protein IAA4-like [Cucurbita moschata]	[more]
XP_023539614.1	5.1e-53	97.20	auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6596988.1	8.7e-53	96.26	Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh06G009170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04240.1	5.3e-24	50.88	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	9.1e-24	53.21	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	2.0e-18	50.94	indole-3-acetic acid inducible	[more]
AT3G23030.1	1.3e-17	47.22	indole-3-acetic acid inducible 2	[more]
AT4G14550.1	6.3e-17	49.00	indole-3-acetic acid inducible 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 39..107 e-value: 1.4E-23 score: 84.1
None	No IPR available	GENE3D	3.10.20.90		coord: 77..107 e-value: 1.6E-7 score: 33.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..57
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 4..45
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 41..107
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..45
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 41..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G009170.1	CmaCh06G009170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus