CmaCh06G008430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G008430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Phenylalanine--tRNA ligase
Location	Cma_Chr06: 4659535 .. 4661491 (-)
RNA-Seq Expression	CmaCh06G008430
Synteny	CmaCh06G008430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTGCTGGAGGCCTCCTCTCTTAGTATTTCGCCTAAAAATCAGTCACTTGAATTCATATTTTCCATCCCTTAAACACATGCCCCGTTATCGGTTCAGTATCAGGAATAAGATGAGCCAAACAACAACAGTACAGAGATGAATATGGTTTTTGAGTATGGAACAGATATTGATTTTGTGAAGATATTTAATTAGTGAGAGGTAGATTGGATGAACAGCGAGAGGGACGGTCAAATTGTAGATTTTTCCGTTTTTCGCTTCATTTATTTTTTGTATCTTTTTATACATAACTTTGAATCAACTTAGTTTTAATCCTCTTTTCAACAAAATTAATCTTGTGCTAATCCGTTTAGTGTACAAATAAACAAACTGTTCTTGTCTTTGAAACCTCGACGTCGGTCCTGTTCAATTTCAGTTTCCTTCATGGAAGTTGGGTAAAATTCTTCCAAGAACAACCCATCAAAATTTGGTAACCTAATTCCAATAATAATAATAAAAAAACTATATTTCTTGATTGATATGGACAATTCAAGAGTCCTTACATGAAGGAACTATGGGCTTCCATAAAATTAAGAAAAATTCGAAAAATTAATTCTCATCATGTATTTTTTTGAACTTCTACGTCATTCAAATGTGTCAAAAAAAAAAAAAAAAGAAAACTTGACAACTCAATTTGAAGACAAAAAATAAGAGAAATTATATGGAATAAGTTCATGTAGTTAACACTATTGTAAAAGCCCAACAAGCCACTGAGGAATCTGACGCTGTTCTACTGCTTTTGTCGTCATGTCAGGGCTTTTGTGTGAGAGCATATTTTCGTGAGCGTTTTAGTAAGAGGCCGCAATCCCATCGTGAAGACGGTAGAGGAAGCAATTCTCCGTTACCTTGAGAACAACGTCGAAATCTCCGATTCTGGACTGTTCGCCCACGAATTTCGACTCGATCACAATGAGCTCGTCAACATCATCAAGAGTCTCAACGGCTACAGATACGTCGATGCTGAAGTACGCCTGCTTCTTTCTGCTACTATGAATTTCCAGTTTAGCAAAGTCCACGCTGTTTGTTTGAGTTTGGTTTGTGCTGCAAGGGACGGTTTACCTGGATTTTTACTTGTCATTGCTTGCAGAGTAATCCGCATTTGTATGGTTCTTTGCGTCAATTGACAATTGGTGCGTGGTGGACTAAGACAATATTTCTTTAATACTCGTGAATTGGTTTTCTTGTATATGATTGTTGCTATAACGTTTGATTGGTCAACCGGTTTCTGACGGTTGTTAATGTTGAATTGGATAGTTGTTTCTAGTATTTCTCGTGATTAACCTGTTGTCTTTGGTTATTTCATATTCTTATAGTTTGATATTTTCACGAATAATTGAACTGTGAATTCATTAATAATAGAACTACAGGTGATATTGCCATCATGATTGTTCATTTTGGTTTGGTGCGTTGAATAGTATGAGGATTATCCCAATGTAGTCTTTTCATTTGAGTTTGATGATGTGAGAGCTGTTTAGATGCAAAATTAGGCATTTCATCTTTTATTTTTTGCCTTCATTTTCATCAGTTTTGGATTTGAGTACATCTTAGTGCTGTAGTTGTTTGTCGCAAATGACCAACTGGTCTGTTGTTGCAGAAAAAGTTGGGTCTATCTGTTTTCAAGATTGGATGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAAGTAATATCCAGAAAGGTTTGTCACTTGCACTTTGTGGTGTTCAGTGTCAAAATGTTGAGAAAAATGATCTCAAGTGGTGTTGATTGTATGAAATAACTATTATACTTCGTAACCTGGATGTGACACAGATTAGCTTCTAAGCATTATTACTTTCTTGCTTAGATATTATAACTAAAGCTCCTTTACATTCTTTTTGATTATTCACAAGTGATTTTTCCTGTAGGTTCAACATGTTGATGATTAG

mRNA sequence

ATGCATTGCTGGAGGCCTCCTCTCTTAGTATTTCGCCTAAAAATCAGTCACTTGAATTCATATTTTCCATCCCTTAAACACATGCCCCGTTATCGGTTCAGTATCAGGAATAAGATGAGCCAAACAACAACAACGGTAGAGGAAGCAATTCTCCGTTACCTTGAGAACAACGTCGAAATCTCCGATTCTGGACTGTTCGCCCACGAATTTCGACTCGATCACAATGAGCTCGTCAACATCATCAAGAGTCTCAACGGCTACAGATACGTCGATGCTGAAAAAAAGTTGGGTCTATCTGTTTTCAAGATTGGATGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAAGTAATATCCAGAAAGGTTCAACATGTTGATGATTAG

Coding sequence (CDS)

ATGCATTGCTGGAGGCCTCCTCTCTTAGTATTTCGCCTAAAAATCAGTCACTTGAATTCATATTTTCCATCCCTTAAACACATGCCCCGTTATCGGTTCAGTATCAGGAATAAGATGAGCCAAACAACAACAACGGTAGAGGAAGCAATTCTCCGTTACCTTGAGAACAACGTCGAAATCTCCGATTCTGGACTGTTCGCCCACGAATTTCGACTCGATCACAATGAGCTCGTCAACATCATCAAGAGTCTCAACGGCTACAGATACGTCGATGCTGAAAAAAAGTTGGGTCTATCTGTTTTCAAGATTGGATGTGCTCAGGCAGCAAAGAACAAATGGGTTGAAATGGGGAAGCAAGTAATATCCAGAAAGGTTCAACATGTTGATGATTAG

Protein sequence

MHCWRPPLLVFRLKISHLNSYFPSLKHMPRYRFSIRNKMSQTTTTVEEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAEKKLGLSVFKIGCAQAAKNKWVEMGKQVISRKVQHVDD

Homology

[Close]

BLAST of CmaCh06G008430 vs. ExPASy Swiss-Prot
Match: Q9T034 (Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g39280 PE=2 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDA-------------- 106
           EEAIL +L+NN +I+DSG F+ EF +DHNELVN+IKSL+G+RY+D               
Sbjct: 3   EEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEG 62

Query: 107 ----------------------------EKKLGLSVFKIGCAQAAKNKWVEMGKQVISRK 131
                                       +KKL  +VFKIGC+QA KNKWVEMGKQV SRK
Sbjct: 63  KKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQV-SRK 122

[Close]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1GA81 (Phenylalanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111452362 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29
Identity = 78/125 (62.40%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAILRYLE NVEISDSGLFAHEF LDHNE+VNIIKSLNG+RYVDAE             
Sbjct: 3   EEAILRYLEKNVEISDSGLFAHEFGLDHNEVVNIIKSLNGFRYVDAEDIKKEKWTLTGEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG SVFKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ESYAATGSPEVQLLLAIPPEGIPREELQKKLGPSVFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1L3Z0 (Phenylalanine--tRNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111500296 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 73/125 (58.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE NVEISDSG FA EFRLDHNE+VN+IKSLNG+RYVDAE             
Sbjct: 3   EEAILGYLEKNVEISDSGRFADEFRLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTDEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG S+FKIGCAQAAKNKWVEMGKQ ISRKV
Sbjct: 63  ETYTATGSPELQLFLAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1E9L5 (Phenylalanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111431119 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 9.1e-26
Identity = 72/125 (57.60%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE NVEISDSG FA EF LDHNE+VN+IKSLNG+RYVDAE             
Sbjct: 3   EEAILGYLEKNVEISDSGRFADEFGLDHNEVVNVIKSLNGFRYVDAEDIKKEKWILTDEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG S+FKIGCAQAAKNKWVEMGKQ ISRKV
Sbjct: 63  ETYTATGSPELQLFLAIPPEGIPKEELQKKLGPSIFKIGCAQAAKNKWVEMGKQSISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL
Match: A0A0A0L425 (Phenylalanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G016390 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.5e-25
Identity = 70/125 (56.00%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE N EISDSG FA EF LDHNE+VN+IKSLNG+RYVDAE             
Sbjct: 3   EEAILGYLEKNTEISDSGRFADEFGLDHNEVVNVIKSLNGFRYVDAEDIKMEKWVLTKEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG S+FKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ETYTATGSPEMQLFLAIPPEGIPREELQKKLGPSIFKIGCAQAAKNKWVEMGKQMISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL
Match: A0A6J1DPI5 (Phenylalanine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111022634 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.5e-25
Identity = 69/125 (55.20%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE N+EISDSG FA EF LDH+++VN+IKSLNG+RYV+AE             
Sbjct: 3   EEAILGYLEKNIEISDSGRFADEFGLDHSDVVNVIKSLNGFRYVEAEDIKKEKWILTDEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG S+FKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ESYTATGSPEVQLFLEIPPEGIPREELQKKLGPSIFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. NCBI nr
Match: XP_023521081.1 (phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521082.1 phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 7.4e-30
Identity = 79/125 (63.20%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAILRYLE NVEISDSGLFAHEF LDHNE+VNIIKSLNG+RYVDAE             
Sbjct: 3   EEAILRYLEKNVEISDSGLFAHEFGLDHNEVVNIIKSLNGFRYVDAEDIKKEKWILTGEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLGLSVFKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ETYAATGSPEVQLLLAIPPEGIPREELQKKLGLSVFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. NCBI nr
Match: XP_022948806.1 (phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita moschata] >XP_022948815.1 phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 138.3 bits (347), Expect = 4.8e-29
Identity = 78/125 (62.40%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAILRYLE NVEISDSGLFAHEF LDHNE+VNIIKSLNG+RYVDAE             
Sbjct: 3   EEAILRYLEKNVEISDSGLFAHEFGLDHNEVVNIIKSLNGFRYVDAEDIKKEKWTLTGEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG SVFKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ESYAATGSPEVQLLLAIPPEGIPREELQKKLGPSVFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. NCBI nr
Match: KAG7030192.1 (Phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.2 bits (339), Expect = 4.1e-28
Identity = 77/125 (61.60%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAILRYLE NVEISDSGLFA EF LDHNE+VNIIKSLNG+RYVDAE             
Sbjct: 3   EEAILRYLEKNVEISDSGLFAREFGLDHNEVVNIIKSLNGFRYVDAEDIKKEKWILTGEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG SVFKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  EIYAATGSPEVQLLLAIPPEGIPREELQKKLGPSVFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. NCBI nr
Match: KAG6596916.1 (Phenylalanine--tRNA ligase alpha subunit, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-27
Identity = 76/125 (60.80%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE NVEISDSGLFA EF LDHNE+VNIIKSLNG+RYVDAE             
Sbjct: 3   EEAILCYLEKNVEISDSGLFAREFGLDHNEVVNIIKSLNGFRYVDAEDIKKEKWILTGEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG SVFKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  EIYAATGSPEVQLLLAIPPEGIPREELQKKLGPSVFKIGCAQAAKNKWVEMGKQLISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. NCBI nr
Match: XP_038905221.1 (phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-26
Identity = 73/125 (58.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDAE------------- 106
           EEAIL YLE NVEISDSG FA EF LDHNE+VN+IKSLNG+RYVDAE             
Sbjct: 3   EEAILSYLEKNVEISDSGRFADEFGLDHNEVVNVIKSLNGFRYVDAEDIKMEKWVLTNEG 62

Query: 107 ----------------------------KKLGLSVFKIGCAQAAKNKWVEMGKQVISRKV 131
                                       KKLG S+FKIGCAQAAKNKWVEMGKQ+ISRKV
Sbjct: 63  ETYTAAGSPEVQLFLAIPPEGIPREELQKKLGPSIFKIGCAQAAKNKWVEMGKQMISRKV 122

[Close]

BLAST of CmaCh06G008430 vs. TAIR 10
Match: AT4G39280.1 (phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative )

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-22
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDA-------------- 106
           EEAIL +L+NN +I+DSG F+ EF +DHNELVN+IKSL+G+RY+D               
Sbjct: 3   EEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEG 62

Query: 107 ----------------------------EKKLGLSVFKIGCAQAAKNKWVEMGKQVISRK 131
                                       +KKL  +VFKIGC+QA KNKWVEMGKQV SRK
Sbjct: 63  KKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQV-SRK 122

[Close]

BLAST of CmaCh06G008430 vs. TAIR 10
Match: AT4G39280.2 (phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative )

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-22
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 47  EEAILRYLENNVEISDSGLFAHEFRLDHNELVNIIKSLNGYRYVDA-------------- 106
           EEAIL +L+NN +I+DSG F+ EF +DHNELVN+IKSL+G+RY+D               
Sbjct: 3   EEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEG 62

Query: 107 ----------------------------EKKLGLSVFKIGCAQAAKNKWVEMGKQVISRK 131
                                       +KKL  +VFKIGC+QA KNKWVEMGKQV SRK
Sbjct: 63  KKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQV-SRK 122

The following BLAST results are available for this feature:

BLAST of CmaCh06G008430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T034	1.1e-20	46.03	Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana OX...	[more]

BLAST of CmaCh06G008430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA81	2.3e-29	62.40	Phenylalanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111452362 PE=3 SV...	[more]
A0A6J1L3Z0	1.4e-26	58.40	Phenylalanine--tRNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111500296 PE=3 SV=1	[more]
A0A6J1E9L5	9.1e-26	57.60	Phenylalanine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111431119 PE=3 SV...	[more]
A0A0A0L425	4.5e-25	56.00	Phenylalanine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_3G016390 PE=3 SV=1	[more]
A0A6J1DPI5	4.5e-25	55.20	Phenylalanine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111022634 PE=3 S...	[more]

BLAST of CmaCh06G008430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521081.1	7.4e-30	63.20	phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita pepo subsp...	[more]
XP_022948806.1	4.8e-29	62.40	phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Cucurbita moschata] ...	[more]
KAG7030192.1	4.1e-28	61.60	Phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Cucurbita argyrosperma su...	[more]
KAG6596916.1	3.4e-27	60.80	Phenylalanine--tRNA ligase alpha subunit, cytoplasmic, partial [Cucurbita argyro...	[more]
XP_038905221.1	2.2e-26	58.40	phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Benincasa hispida]	[more]

BLAST of CmaCh06G008430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39280.1	7.9e-22	46.03	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	[more]
AT4G39280.2	7.9e-22	46.03	phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1370.240		coord: 41..124 e-value: 1.4E-7 score: 33.8
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 47..93
None	No IPR available	PANTHER	PTHR11538:SF79	PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT	coord: 47..93
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 93..123
None	No IPR available	PANTHER	PTHR11538:SF79	PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT	coord: 93..123
IPR040724	PheRS, DNA binding domain 1	PFAM	PF18552	PheRS_DBD1	coord: 44..86 e-value: 1.6E-7 score: 31.0
IPR040725	PheRS, DNA binding domain 3	PFAM	PF18553	PheRS_DBD3	coord: 90..128 e-value: 7.8E-8 score: 32.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G008430.1	CmaCh06G008430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0097159	organic cyclic compound binding