Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGTGTCATCCCCATTCTCATCACCGACTGAGCCGACCGAGGAACTTTTTTTTTTCACCGGGGAAGAGACGACGCCGAGAGAAAATGGAAGCAGCGGCGGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCATGATGGTCTTTACTTTCCTCGTGCGCTTCAATCCACTGCCACGAATCCGTCTCAGCGCAAGGCCATTCTGCTGGACCTCCTTTCTCGTGACGTCGCCGTCTTTCTAGGTTTCTCTCTCTCTCTAATGAACCTTTGGATTTTTGCAATTTCTGGCGTGGATTTCTGTTGTATGTTTATTGTTAAGGAGCCCTAGCTTAATTGATCGAATTCGAAAGAAAAATTTTGAGAGACAAGAATGAGTAGTTCATGCTTATATTTTATATGGTTCTTGTATTATCCGACGCGTCTTAGTGAGGAGATTTAATGGAAAGGTTCATAATGCTGAGTCCTATGGTTCAGTTTAGCTTCTAGGGTAATGAAGGAGAAGATGAAATTAGTTAATGAGAACAGTGTGCTCCATAATTTACTTCGTTTTTTTTGGTTGTCATTTTGTGAGCTGAAGAATGAAGTATGAGTCCCAATTTCTTACCAATTGTAGGAAATATAACAATAATGAATTTTAACGTCTTTTTGTGTGTCTCTGAGTGTTCTACGGTTGAGAGGAAGGAACAAACTCTGACGCATTACCACAACTGTTATATCTTTATGAAGTAATTTTCTTTTAGGTATTTGGAATCGTTATAAGCCGTGAAGAAGAAACAATTCAATATCTCTGATTTCCACACTTTTTGCTACTGAAAGTGAAGTTAAAAAAAATATATATTTGGGCACTTTTTGGAGTCTATTAATTGAAACTCTAGCAGAGTAATATCTTGGATTGGTAATATATACAAACCTTTTTTGTAACTATTTTGATTTTGATCCTTGGAAGCTGCCTCTCTCCATACAATTTTAATATTCTAATGTTTGTTGCTCCTCCAACTTTGATTGATGTAGAGCGATATGGATCACAATTGACATCCAATGAGCTCCATGAGTTTGATAATCTTAAGGATGATTACGAGATCAATTGGCATTTAAAGCACCTTTGGAGTATAAAGAGTCCAACATCAGATGAACTACACTCTAGATCAGTTGTTGTGAAAAATAGGAGGAGGGCATATCTGAACAAACTGATACGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGATAGACAGCCTTTTTTACATCATGAGTATGTAGGGAAATTTCAAGATCCAAGTGGTAGAGGTATGGCAAGACCAGGAGAGCGATGGTCTGAGACTCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACTCAGATTAGGTGTCGCTGAAAGGGACTTGGTAGGTAATGATTTAAACCCAAAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGATGAAGAAGAGGAGGAAGATGAAGAAGAGGAGGAGAAGGAGGAAGTGGGGGAGGATGGGAAAGGTGACAAGGCTGCTAATGGAGCTCATTCCATGGAGGTAATTTCGTATCATCTTTTCTATTTTTTTCCTTCTATTTTTTGATAAATATATTTTATGCATTGGTCTGATTAACATCTACTTCTTATTGGCTTGTTAAATATGTTTTTATACAAGTCTTCTTTGCATTCCTCCCGTTGATTATGACTTCTATAATAAAACTGAAATGGTGTGCACTTTAGTTTCTGCCTTGTCCATTGTCCAACCTTTTGCATTCCTAGCTCCTTTCTATTTAACTAATACAGATGGTTTTAATGCTTGTATGTTCTTTAGACAGTAATGTTTAGTATATCTGATCTTTGTGGTGGTGTACTAACCTCAAAAAATTATTTTATAACTATAAGCCTTCTCATAATTACTAATGATTGTAAGGCTCTCCTTTTGTACCTCCTTGAGAGAGTGTTATGTCTACTCCCGTCCCTTAGGTAGTCTTCTTTTTTGTGATTAATAAACATCTTTGTTTCTTATCAAGAAAAAGTATATCTGATCATTGTGGGTTGATCAGAATGACACATCTGAATATATTGTGATATGCAGATATCACTTGTCCATTATAGTCAGGTGTTTGATATGTGATGCTTTCACTTGTAGGTATCCACCGCACAGGATAATCAGCATGAAAGGTCAGCAACAGACAATACTCAAGCTGCGGAGGGTGGGTCTAATCATGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAGGTTTTGTTGGGAGAAGACTACGAGCATTTAGATTACTCAAAAATAGACAATGACGAGACGTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCAATGAAGATTAGACAGGATGAAAGGTGCCGTTCCTTTCATATGACTGTAAAGCTTTTATGTTAAATTGACACGTGTATGTTGGAGGCCCTTCTGGCCTCTCAGATTCTATAACATTAATCTGAGTGTAGAATTTGAAGACTTACTTGACTGCTTTTATAATGGTTAACTTTTAGGTGAAAAGAACGGTTTAAGTTCTTCTTTGGTCCTTAAACTTCCAAAATATCCATATTGTAGTCCCTCTATTCTTTAGGTTTATTCCATTTTAGTCCATGAACTCTTAACATATCTTTTATAGTCCCAGAACTTTAATAAGATAATCATTTTCGTTATTTTTAACGAACATTATGGTTTCAAGTATGTGATAATGTTGATATGGACATATTTTTTAGCCTCATTGAGTGATTGATGCGAGTATTGGGCGGGTAGATATTAGATAACTGAATAATGGCGAGGACCAAAATGGTTATGTTTTGAAAGTTTACAAATTACAATAGTTGAGTGATGCCCTTTCTATTTATGTTCATACCTATCATGCTAAATACTGGAAAGCTCGGTTTGCATCAAATGAGTCTTTCAATAGCGACTTCTTTTACATGTCAAAACCACATGTACTTGCTGAATCTCTTTTGCTATCTTTTGTTTATTTTTTTACCAACTCTCAGTTCTTATTCAGATCACGAAACTGGAAGAAGATAAGATGAAGGCAAGGGGGGCGAACGAGATGATGGACAGGATCAACTGACTCTGCTGAGCGATGTGAAATCCCTGTTAAGAATGGAGAATGATCTTTGTGCTGACTTAAATGGAAAGGGCAGGTTCCAGGAGCATGGGAATAATTTGTGCCAGCCTCCATGAGATATTCTTCCAGGTATTTCTTCGGCATTAACTTTGATTTCTTACAGAAGAAAAAAAAAATTACTCGAATGGAGAAATTGGCTTCTTGGTATTGGCATCTGGCTCAACTGAAATCTTGTTGTTATGCTCATGTTCTTTCTGTATTATGAATATTTTTACATTTTCAAACTTTGCCTCTGAATGTGTGAATATTAAGATAATTATATTGGCCTTTCAGGCAACTCTTAATCTGATCGTCATCAT
mRNA sequence
CGTGTGTCATCCCCATTCTCATCACCGACTGAGCCGACCGAGGAACTTTTTTTTTTCACCGGGGAAGAGACGACGCCGAGAGAAAATGGAAGCAGCGGCGGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCATGATGGTCTTTACTTTCCTCGTGCGCTTCAATCCACTGCCACGAATCCGTCTCAGCGCAAGGCCATTCTGCTGGACCTCCTTTCTCGTGACGTCGCCGTCTTTCTAGAGCGATATGGATCACAATTGACATCCAATGAGCTCCATGAGTTTGATAATCTTAAGGATGATTACGAGATCAATTGGCATTTAAAGCACCTTTGGAGTATAAAGAGTCCAACATCAGATGAACTACACTCTAGATCAGTTGTTGTGAAAAATAGGAGGAGGGCATATCTGAACAAACTGATACGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGATAGACAGCCTTTTTTACATCATGAGTATGTAGGGAAATTTCAAGATCCAAGTGGTAGAGGTATGGCAAGACCAGGAGAGCGATGGTCTGAGACTCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACTCAGATTAGGTGTCGCTGAAAGGGACTTGGTAGGTAATGATTTAAACCCAAAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGATGAAGAAGAGGAGGAAGATGAAGAAGAGGAGGAGAAGGAGGAAGTGGGGGAGGATGGGAAAGGTGACAAGGCTGCTAATGGAGCTCATTCCATGGAGGTATCCACCGCACAGGATAATCAGCATGAAAGGTCAGCAACAGACAATACTCAAGCTGCGGAGGGTGGGTCTAATCATGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAGGTTTTGTTGGGAGAAGACTACGAGCATTTAGATTACTCAAAAATAGACAATGACGAGACGTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCAATGAAGATTAGACAGGATGAAAGATCACGAAACTGGAAGAAGATAAGATGAAGGCAAGGGGGGCGAACGAGATGATGGACAGGATCAACTGACTCTGCTGAGCGATGTGAAATCCCTGTTAAGAATGGAGAATGATCTTTGTGCTGACTTAAATGGAAAGGGCAGGTTCCAGGAGCATGGGAATAATTTGTGCCAGCCTCCATGAGATATTCTTCCAGGTATTTCTTCGGCATTAACTTTGATTTCTTACAGAAGAAAAAAAAAATTACTCGAATGGAGAAATTGGCTTCTTGGTATTGGCATCTGGCTCAACTGAAATCTTGTTGTTATGCTCATGTTCTTTCTGTATTATGAATATTTTTACATTTTCAAACTTTGCCTCTGAATGTGTGAATATTAAGATAATTATATTGGCCTTTCAGGCAACTCTTAATCTGATCGTCATCAT
Coding sequence (CDS)
ATGGAAGCAGCGGCGGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCATGATGGTCTTTACTTTCCTCGTGCGCTTCAATCCACTGCCACGAATCCGTCTCAGCGCAAGGCCATTCTGCTGGACCTCCTTTCTCGTGACGTCGCCGTCTTTCTAGAGCGATATGGATCACAATTGACATCCAATGAGCTCCATGAGTTTGATAATCTTAAGGATGATTACGAGATCAATTGGCATTTAAAGCACCTTTGGAGTATAAAGAGTCCAACATCAGATGAACTACACTCTAGATCAGTTGTTGTGAAAAATAGGAGGAGGGCATATCTGAACAAACTGATACGTGATGGCCAGTACTTCTCGGAGGATGCAATGAGGGATAGACAGCCTTTTTTACATCATGAGTATGTAGGGAAATTTCAAGATCCAAGTGGTAGAGGTATGGCAAGACCAGGAGAGCGATGGTCTGAGACTCTGATGAGGAGATCAGAGGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACTCAGATTAGGTGTCGCTGAAAGGGACTTGGTAGGTAATGATTTAAACCCAAAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGATGAAGAAGAGGAGGAAGATGAAGAAGAGGAGGAGAAGGAGGAAGTGGGGGAGGATGGGAAAGGTGACAAGGCTGCTAATGGAGCTCATTCCATGGAGGTATCCACCGCACAGGATAATCAGCATGAAAGGTCAGCAACAGACAATACTCAAGCTGCGGAGGGTGGGTCTAATCATGGAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGACCAATTCACATACATCATGCATCAGAAGGTTTTGTTGGGAGAAGACTACGAGCATTTAGATTACTCAAAAATAGACAATGACGAGACGTTGGATGATCACTGGCTGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCAATGAAGATTAG
Protein sequence
MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIRDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANGAHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGEDYEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED
Homology
BLAST of CmaCh06G008250 vs. ExPASy TrEMBL
Match:
A0A6J1L293 (coiled-coil domain-containing protein 97 OS=Cucurbita maxima OX=3661 GN=LOC111498443 PE=4 SV=1)
HSP 1 Score: 627.9 bits (1618), Expect = 2.5e-176
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED
Sbjct: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED
Sbjct: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 335
BLAST of CmaCh06G008250 vs. ExPASy TrEMBL
Match:
A0A6J1F5X8 (coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111442400 PE=4 SV=1)
HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 324/335 (96.72%), Postives = 326/335 (97.31%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSL DGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 CDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQ RLGVAERDLVGNDLNP+EEEEEEEEEEE EEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQRRLGVAERDLVGNDLNPREEEEEEEEEEE--EEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTA DNQ ERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQK LLGED
Sbjct: 241 AHSMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
EHLDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 301 NEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 333
BLAST of CmaCh06G008250 vs. ExPASy TrEMBL
Match:
A0A6J1DQL7 (coiled-coil domain-containing protein 97 OS=Momordica charantia OX=3673 GN=LOC111022667 PE=4 SV=1)
HSP 1 Score: 523.1 bits (1346), Expect = 8.6e-145
Identity = 285/332 (85.84%), Postives = 302/332 (90.96%), Query Frame = 0
Query: 4 AAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLERYG 63
A AK LS EAMDCLSERLSL + LYFPRALQSTATNPSQRKAILLDLLSRD AVFLERYG
Sbjct: 8 ATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFLERYG 67
Query: 64 SQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIRDG 123
SQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELHSRSV+VKNRRRAYLNKLI DG
Sbjct: 68 SQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKLICDG 127
Query: 124 QYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQL 183
QYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQ
Sbjct: 128 QYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQR 187
Query: 184 RLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANGAHS 243
RLGVAERDL+GND+N + EEEEEEEEEE+EEEEE+EE GE+ KG++ AN AHS
Sbjct: 188 RLGVAERDLIGNDVNQENGEEEEEEEEEEEEEEEEEEE-------GEERKGNEPANAAHS 247
Query: 244 MEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGEDYEH 303
ME+S A D Q+E+SATDN+ AAEGGSN GATLSEADMQDQMDQFTYIMHQK LLGED EH
Sbjct: 248 MEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQKFLLGEDNEH 307
Query: 304 LDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
LDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 308 LDYSKIDNDETLDDHWLREANDDAEEKYFDED 332
BLAST of CmaCh06G008250 vs. ExPASy TrEMBL
Match:
A0A1S3BKG3 (coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832 PE=4 SV=1)
HSP 1 Score: 520.4 bits (1339), Expect = 5.6e-144
Identity = 289/348 (83.05%), Postives = 309/348 (88.79%), Query Frame = 0
Query: 2 EAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLER 61
E AAKGLSCEAMDCLSERLSL + LYFPRALQSTA+NPSQRKAILLDLLSRDVAVFLER
Sbjct: 5 ETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
Query: 62 YGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIR 121
YGSQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELH+RSV+VKNRRRAYL+KLI
Sbjct: 65 YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKLIY 124
Query: 122 DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 181
DGQYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE
Sbjct: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
Query: 182 QLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEE--------------EEDEEEEEKEE 241
Q RLGVAERDLVGN++N EEEEEEEEEEEE+EEE EE+EEE+EKEE
Sbjct: 185 QRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 244
Query: 242 VGEDGKGDKAANGAHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQF 301
GED +K NG SMEV+ A D+QHER AT+N++ AEGGSNH ATLSEADMQDQMDQF
Sbjct: 245 EGED--NNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQF 304
Query: 302 TYIMHQKVLLGEDYEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
TYIMHQK LLGED EHLDYSKIDNDETLDDHW+REANDDAEEKYF+ED
Sbjct: 305 TYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350
BLAST of CmaCh06G008250 vs. ExPASy TrEMBL
Match:
A0A5A7TDJ3 (YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00070 PE=4 SV=1)
HSP 1 Score: 482.6 bits (1241), Expect = 1.3e-132
Identity = 255/334 (76.35%), Postives = 270/334 (80.84%), Query Frame = 0
Query: 2 EAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLER 61
E AAKGLSCEAMDCLSERLSL + LYFPRALQSTA+NPSQRKAILLDLLSRDVAVFLER
Sbjct: 5 ETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
Query: 62 YGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIR 121
YGSQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELH+RSV+VKNRRRAYL+KLI
Sbjct: 65 YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKLIY 124
Query: 122 DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 181
DGQYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE
Sbjct: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
Query: 182 QLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANGA 241
Q RLGVAERDLVGN+
Sbjct: 185 QRRLGVAERDLVGNN--------------------------------------------- 244
Query: 242 HSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGEDY 301
V+ A D+QHER AT+N++ AEGGSNH ATLSEADMQDQMDQFTYIMHQK LLGED
Sbjct: 245 ----VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDS 289
Query: 302 EHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
EHLDYSKIDNDETLDDHW+REANDDAEEKYF+ED
Sbjct: 305 EHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 289
BLAST of CmaCh06G008250 vs. NCBI nr
Match:
XP_023005463.1 (coiled-coil domain-containing protein 97 [Cucurbita maxima])
HSP 1 Score: 627.9 bits (1618), Expect = 5.1e-176
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED
Sbjct: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED
Sbjct: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 335
BLAST of CmaCh06G008250 vs. NCBI nr
Match:
KAG7030174.1 (hypothetical protein SDJN02_08521, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 599.7 bits (1545), Expect = 1.5e-167
Identity = 325/335 (97.01%), Postives = 327/335 (97.61%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSL DGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 CDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQ RLGVAERDLVGNDLNP+EEEEEEEEEEEE EEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQRRLGVAERDLVGNDLNPREEEEEEEEEEEE-EEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTA DNQ ERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQK LLGED
Sbjct: 241 AHSMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
EHLDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 301 NEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 334
BLAST of CmaCh06G008250 vs. NCBI nr
Match:
XP_022935567.1 (coiled-coil domain-containing protein 97 [Cucurbita moschata])
HSP 1 Score: 599.0 bits (1543), Expect = 2.6e-167
Identity = 324/335 (96.72%), Postives = 326/335 (97.31%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSL DGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 CDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQ RLGVAERDLVGNDLNP+EEEEEEEEEEE EEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQRRLGVAERDLVGNDLNPREEEEEEEEEEE--EEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTA DNQ ERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQK LLGED
Sbjct: 241 AHSMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
EHLDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 301 NEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 333
BLAST of CmaCh06G008250 vs. NCBI nr
Match:
KAG6596899.1 (hypothetical protein SDJN03_10079, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 595.9 bits (1535), Expect = 2.2e-166
Identity = 321/335 (95.82%), Postives = 323/335 (96.42%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSL DGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 CDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQ RLGVAERDLVGNDLNP+EEEEEEEE EEEEEDEEEEEKEEVGEDGKGDKAANG
Sbjct: 181 EQRRLGVAERDLVGNDLNPREEEEEEEE-----EEEEEDEEEEEKEEVGEDGKGDKAANG 240
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
AHSMEVSTA DNQ ERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQK LLGED
Sbjct: 241 AHSMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGED 300
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
EHLDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 301 NEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 330
BLAST of CmaCh06G008250 vs. NCBI nr
Match:
XP_023539774.1 (coiled-coil domain-containing protein 97 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 595.1 bits (1533), Expect = 3.7e-166
Identity = 324/336 (96.43%), Postives = 326/336 (97.02%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEAAAAKGLSCEAMDCLSERLSL DGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE
Sbjct: 1 MEAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI
Sbjct: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
DGQYFSEDAMRDRQPFLHHEYVGKFQD SGRGMARPGERWSETLMRRSEEAMLVAKIRG
Sbjct: 121 CDGQYFSEDAMRDRQPFLHHEYVGKFQDLSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
Query: 181 EQLRLGVAERDLVGNDLNPK-EEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAAN 240
EQ RLGVAERDLVGNDLNPK EEEEEEEEEEEE+EEEEEDEEEEEKEEVGEDGKGDKAAN
Sbjct: 181 EQRRLGVAERDLVGNDLNPKEEEEEEEEEEEEEEEEEEEDEEEEEKEEVGEDGKGDKAAN 240
Query: 241 GAHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGE 300
GAHSMEVSTA DNQ ERSATDN QAAEGGSNHGATLSEADMQDQMDQFTYIMHQK LLGE
Sbjct: 241 GAHSMEVSTAMDNQQERSATDNNQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFLLGE 300
Query: 301 DYEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
D EHLDYSKIDNDETLDDHWLREANDDAEEKYF+ED
Sbjct: 301 DNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 336
BLAST of CmaCh06G008250 vs. TAIR 10
Match:
AT5G47090.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 328.6 bits (841), Expect = 6.0e-90
Identity = 200/335 (59.70%), Postives = 234/335 (69.85%), Query Frame = 0
Query: 1 MEAAAAKGLSCEAMDCLSERLSLHDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLE 60
MEA KG + E ++ERLS D LYFPRA+Q TA + QRK+ILLDLL RD AVFLE
Sbjct: 10 MEATTMKGTAAED---ITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLE 69
Query: 61 RYGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLI 120
RYGS+L +EL EFD +K DYE++WHLK+L SPTS+E+ SRSV V+NRR AYLNKL+
Sbjct: 70 RYGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLV 129
Query: 121 RDGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRG 180
+GQYFSEDAMRDR+P+LHHEYVGKFQD GR MARPGERWSETLMRR+EEA+LV +IR
Sbjct: 130 SEGQYFSEDAMRDREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIRE 189
Query: 181 EQLRLGVAERDLVGNDLNPKEEEEEEEEEEEEDEEEEEDEEEEEKEEVGEDGKGDKAANG 240
EQ RLGV+E D VGN+ EE EEEEEEE E+EEEEEDEE + E + NG
Sbjct: 190 EQQRLGVSESDWVGNE--KMEESEEEEEEESEEEEEEEDEEAKNPTEA-----SSSSLNG 249
Query: 241 AHSMEVSTAQDNQHERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKVLLGED 300
E +T L +MQD MDQFT IM QK L GED
Sbjct: 250 KEQKEKAT------------------------TVLPPEEMQDMMDQFTSIMEQKFLSGED 309
Query: 301 YEHLDYSKIDNDETLDDHWLREANDDAEEKYFNED 336
++HLDY+KIDNDETLDDHWLRE DAE+KYF+ED
Sbjct: 310 HQHLDYAKIDNDETLDDHWLREIGRDAEDKYFDED 310
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1L293 | 2.5e-176 | 100.00 | coiled-coil domain-containing protein 97 OS=Cucurbita maxima OX=3661 GN=LOC11149... | [more] |
A0A6J1F5X8 | 1.2e-167 | 96.72 | coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1DQL7 | 8.6e-145 | 85.84 | coiled-coil domain-containing protein 97 OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
A0A1S3BKG3 | 5.6e-144 | 83.05 | coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832... | [more] |
A0A5A7TDJ3 | 1.3e-132 | 76.35 | YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
Match Name | E-value | Identity | Description | |
XP_023005463.1 | 5.1e-176 | 100.00 | coiled-coil domain-containing protein 97 [Cucurbita maxima] | [more] |
KAG7030174.1 | 1.5e-167 | 97.01 | hypothetical protein SDJN02_08521, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022935567.1 | 2.6e-167 | 96.72 | coiled-coil domain-containing protein 97 [Cucurbita moschata] | [more] |
KAG6596899.1 | 2.2e-166 | 95.82 | hypothetical protein SDJN03_10079, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023539774.1 | 3.7e-166 | 96.43 | coiled-coil domain-containing protein 97 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G47090.1 | 6.0e-90 | 59.70 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052... | [more] |