CmaCh06G007770 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G007770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	tRNA_edit domain-containing protein
Location	Cma_Chr06: 4015733 .. 4020876 (+)
RNA-Seq Expression	CmaCh06G007770
Synteny	CmaCh06G007770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGAAAGAAGGAAACTGTATTCATCCGAATTGCCCAATGGGGACCGAGGCTGGAGCAATTGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATACCGCCAGACTCTAATCATCAATCGAATTTCGAAGCTCGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCTATTTCCTCTGACAAGGCAGATGGCGACACCGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAACAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTGGACCATCTTTGCAAGAGCATTGTTCTGGTGCGTTTTGGAATCGGATTCTTTTTTTGCAATTTCGATATGTGATTTTGTATTGACGATTTCGAGTGCGTATGTTTATTGCTTTTAGGCCTTTTTCATTAGTTACTTTTGGGTTTGAAGGAATGTGTAGAATTGGATTAATGAGAGGAAATGTTTGGATCGAATGATGGCGTTTATTAAAATGCCTATCTTCCTGAAAAAATTATTTCAGGGTGGAACAGTATGGCCAATGATTTTGCACCATTTGAAACTTATTGGATGCGAGAGAACTAAAAAATGTATTTCAAATCTTTATTGAATGGTTATTAGAGGTAGACATTTTGAACCTGAATTCAACGGTCATTAGAGAGCAGTCAGTGGCTTATTCGTTGAATCTAGTCTTTTTTTCCTCTTCCTGAGTTATAACACTGTTGGGGAGGGACAAACATTTTCAGCTAGTTGCAAATTGAAATGAATTGAACCAAGCATTTATGTTGTGCTTTATTCAAGTCCTCATGTAATCATACTTCCAATGTCATTAGTTCTAGTTGAGATTCTAGCTTTCTGTAATGAACATGACATTGCATTACATTACATTGTGATCATATATGCTCTCGAGAATTCCTATGTTTTATGCTGGGTTGCTTGAGACCATCTCTTTGGTGGCAAACTTGGGGCTTTTTGATAGCATCATGGGATCTTTGTGGAAAGCTTTGGTGTCGAAGAAGGAGGATTTGAGTTTTTTATGGTGTCGAAGAAGGAGGAACTGAACTGTATTTGTATGATCTTCTCGGAGATTGTGCATTTTGTAGTTTTTGTTACTCTTATATATAATTTTTTTCTGTGCTAATCGGAGAGTGTGTTATCTTCTTGAAAGGTTTCTATTTATCCTTATCTTAAATGAATTGATTTGGGAAATTTTCATAAAAGAACCAAATTAGTCTTACCATACATTAGTATTTTCAGCTTCCAAATAGTTCTCGGCTTCTGCGTTCAAGGATTTTACTTTTAACAAAGTAAATTTTTCTCATCAACAATTGAAAGGAAGAGAAAGGAGGGAAAGAAAAGGCCTTATTTTGTTCCTTTTGCATATATGTTGTTGATATAATTTGACAATTGTTAGATGTATGACTGTCAGTTTAAAGATGATAGAAAACTTTCATTGTTAGCTACTGTATGGCTTATGGCATCCATTTTTAATCGAATTTTGGTTGATAAGAACTCGACATTTATATATATTATATACCATATACCATATCTAGAAGTTCAATTAGGACCTCTCCTTCCTAGGCCATGCTTTCGTAGATGCTAAAACGTAACTGGGATCGCGTGTACTTCTGTTTTGTACTGTCAGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTTGTTGTTCAGGTATGCCTTCCTTTCTAATTTTCTCTAAACAGTTTGATATAGTGACCTGTATTCTCCTCTTTTAAAACATAACATTTCTTTATTTAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTGTAAGTTTTCTATTATCCCATTGGTGATGCCTTAATGGTTCTAAATGTGGTAATCCAAATTTTTAGTTTACTTGATTCATTAATTGTTCATATATTCACATCCATGCTTTGATTAAGTTAAGTGAGAAGGAGATCACGACACGATTCAAGCACCATCACTTTGTGCATGCTTTGATTAATATAGATGAAAGAACAAGAGGAGGCCATAAAAACCAAGACCAAACCAACCACGAGAAAAAATTACTGAAAAAAAAAGGAAAATCTCTAAACAAATTATACTTGAAATGCCAAGGGGAGGCACTAATGTTTCAGATACTATAGTTGCTTGAAGTTTTCTTATTCATGGTTTCCTATTTACACAGTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATCCCAGTAAGAATGTTAATGTTTGACTTGATAAATTGTAGATTTGAAATTATTCTAGCTCGAGCAACCCATATTTAAATCTTTTTTCTGAATTTTTCATGTATGCTTTAATTTTTAAAGATCCCATCCCGTAATCAATATGCTCGTTTCTTAATTTTCCCGTAAATTTTCAAAGTGGTACATGTTATTTTGTGCAAATGTGATGATGGCCAATTTTGTTGTAGGGTTCTTCTTGTTTTCTCTTGTTGGATGCAAGGCTAATTCTTTAGTAAATTCTACTAAAATCTGTGACTACGTATAAAATCTACCCTTATCTGGAAATTACCATAACTAACTGGGATAAGATATGAAACCTAAATGGGGATTAGACAAGAAAACGACTATCTATTCACGTTCAGACAACCATTGATATCATCACTAAAGGATGGAAAGTGAGAATGATTCACTAAGAAGAGAGTAGACCCAACTTGGACTAAGTTAAAAAAAAGAACCAATGGCTCGTTCGGATAAATTGTTTCCATTTTGGGTATTGGGAATAACTCAACAAACTGAAATTTCATTATTTCCCTTCTTAAGTTTAAGATCGTTCAATTTTCTTCTTGGTATTTTGTATTGAAGAGATTAGTGCTAGAAAGATCAATGAACGTACAATTTATATTTCTTTACAAGAATTTGAGATTTCATTTAGATAAAATGAAAGAATACAAAAGGGCATTGAAAAACGTAGCCCAACAAGAGAGGCTAAGCAACTAACTATACAAAGGGCATCCAGGTTGTCCTATATGAGGAATTACAATAAAAAGTGAAAATAAATAAAAAAGAGGTAAATTTTTTCGATCTTGTTGATGCCTGGTGACATTATTTGAGGTAAAATGAATCAACGGTTCCTTAATCTTCCAAGAATTTTTCTTCTTCTTGGATATTCACATTGTATATCAGGATATTCTGAGACTATTTGTTGAATCTGTTCTTCAAGGCAAGGAAGCATTAAGAAGAAGTTCAAGTAAGAGATCATTGAATTGGAACATGCCTTGTTCAAGCTTAGAAATGTGAATAAAATAACTGGAATGCTATATAACTAGAATGCTTACTGATCAGTAACTTCGGCATGCTTTGTGCAACCGTAGTGGGTGTTCCATTGAACGGGAGAAAAGTTGGTACCATGAAATTGGCCCACATCTCGGGTCAATTTATGTTTAGGGGGCAGTGTAATGATAGTGTAGCTATTAGAAGCATATTATTAGTCACTAGTTCTTGGTTGGGGTGTGAGGTAAGTTAGTGAGAATTGGATTGCTCTTCAAGAGAAGGTTAAATTTAGAGCACAAATCTTGGGAATGGTTTCTAGAGATAACAGGTGCCTTAAATGCTTAGTGAACCTTTTTATTTCACTTGGATTTTGTAAAGTACATTTCTTTTTTTTGAAATAAGAAACAAAATTTCAAGGATATCAAACAAAATTAGAATGAACAGAGATCAGAGGACGAAAGTATATTATTTAGCTTGGTAATATCGTCCTTGATTACGAGTAAGACGCATAAAGTAAATAAATCAAATATTTCAACATTAGCATATAGGCTCTGATGCTCATTTGGAACTGCCAGAAATGTACTACAATAATAGACATTTTTGCTCATTCTGATCTGGGAGAAATGCGTATTTCCCCATGTTGGATCTTTTTTGATCCTCTTGCTTCTGATTTTTGTCCAGCTTCCAGCTACTGTGCTGGACCAGTGTTTCAAATGTCATGTCTGTCACATTTTATGTGTTGGACAGTATTTTGTGGTCCACTATAGCTTTTGCCTAGACCAATGATTTCCTGCCAGTCTGCCACCACCGAAAATGCCTCGATCGGAAATTAGAACTAAAACCTGGTTGTTCGAACAGCAGAAGTGTGTGCTCGAACACAAAATGGTTCTGACATGTCTAAGTATTAAGCAGATAATCTAATAGTAGGTGGGTAGATTGATGAAATTGTCACACCAACTAAAAAGCATGGAAGATCAGCCTACAAATATAAACAGAAAAATGTACTCTTCTTTCTGAATTCTGATGCATCATTGACTATATTTGTATGGTAAATCTCAATCTTGTTCATCATGCTCTAATTGATTAATTACACTCCGTTTCAGGTGATTTTGGACGAAGCGATTGCGAAACTAAGTCCTGATTATTTTTGGCTGGGCGGTGGGGAAGTCGACCTGAAGTTAGGTATCAGGACATCAGAGTTCATAAACTTTGTTAAACCCTTCATTATCAAGTGTAGCTAGAGAATCAGTTTTCAGCCAGTTCGCCCCTGCCCAAGCTCAACGACGACTCAACACAACCGACTAATACCAACAGGATCAAGGTTTTTAGTATCGTTCTATTTAAATTATTTCTGCTTCTGAGGATCAATTGTTTGGATGGAAGCAAGAACAGAAAAAAAACTAAAAAAGTTTCAGTGCTTAGAAATGGGATTCAGCTACTTAGAATGGCGGAAGTTGTTACAATCTAACCATTTAATAGGCATTAATGATTTTGATTAAAGGACCACTTTCAACTTCAGCAATTCATTATATGATTATGATATGTGAGTAATAAAGTGAGTAGCAAACATACGCAGAATTTGTTGATCAAAATGGAGCAACTCTGCAATTCATGTACGCAGAATCAAGAACATGGAGTAGTCATATCAAAGAAATTGCCGGTGTCCTTTTGTGAACATTTATGAGGGATGCTACTTTACTTGGCTGCATCAGGGCAAGACTATGG

mRNA sequence

AAGAGAAAGAAGGAAACTGTATTCATCCGAATTGCCCAATGGGGACCGAGGCTGGAGCAATTGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATACCGCCAGACTCTAATCATCAATCGAATTTCGAAGCTCGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCTATTTCCTCTGACAAGGCAGATGGCGACACCGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAACAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTGGACCATCTTTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTTGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATCCCAGTGATTTTGGACGAAGCGATTGCGAAACTAAGTCCTGATTATTTTTGGCTGGGCGGTGGGGAAGTCGACCTGAAGTTAGGTATCAGGACATCAGAGTTCATAAACTTTGTTAAACCCTTCATTATCAAGTGTAGCTAGAGAATCAGTTTTCAGCCAGTTCGCCCCTGCCCAAGCTCAACGACGACTCAACACAACCGACTAATACCAACAGGATCAAGGTTTTTAGTATCGTTCTATTTAAATTATTTCTGCTTCTGAGGATCAATTGTTTGGATGGAAGCAAGAACAGAAAAAAAACTAAAAAAGTTTCAGTGCTTAGAAATGGGATTCAGCTACTTAGAATGGCGGAAGTTGTTACAATCTAACCATTTAATAGGCATTAATGATTTTGATTAAAGGACCACTTTCAACTTCAGCAATTCATTATATGATTATGATATGTGAGTAATAAAGTGAGTAGCAAACATACGCAGAATTTGTTGATCAAAATGGAGCAACTCTGCAATTCATGTACGCAGAATCAAGAACATGGAGTAGTCATATCAAAGAAATTGCCGGTGTCCTTTTGTGAACATTTATGAGGGATGCTACTTTACTTGGCTGCATCAGGGCAAGACTATGG

Coding sequence (CDS)

ATGGGGACCGAGGCTGGAGCAATTGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATACCGCCAGACTCTAATCATCAATCGAATTTCGAAGCTCGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCTATTTCCTCTGACAAGGCAGATGGCGACACCGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAACAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTGGACCATCTTTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTTGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATCCCAGTGATTTTGGACGAAGCGATTGCGAAACTAAGTCCTGATTATTTTTGGCTGGGCGGTGGGGAAGTCGACCTGAAGTTAGGTATCAGGACATCAGAGTTCATAAACTTTGTTAAACCCTTCATTATCAAGTGTAGCTAG

Protein sequence

MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVSRLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS

Homology

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BLAST of CmaCh06G007770 vs. ExPASy TrEMBL
Match: A0A6J1KXM4 (uncharacterized protein LOC111498483 OS=Cucurbita maxima OX=3661 GN=LOC111498483 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.3e-130
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS
Sbjct: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. ExPASy TrEMBL
Match: A0A6J1GI39 (uncharacterized protein LOC111454353 OS=Cucurbita moschata OX=3662 GN=LOC111454353 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.4e-127
Identity = 233/238 (97.90%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGA+AERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISS+ ADGDTV+
Sbjct: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSEGADGDTVA 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSF RVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. ExPASy TrEMBL
Match: A0A1S3BLB4 (uncharacterized protein LOC103490895 OS=Cucumis melo OX=3656 GN=LOC103490895 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.8e-111
Identity = 201/238 (84.45%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MG+E+ A+AE+NSMEALAKLE+RQTLI++RIS LEL YLPNLDS PS + SD AD DTV+
Sbjct: 5   MGSESEAMAEQNSMEALAKLEHRQTLILHRISNLELKYLPNLDSPPSSVPSDGADDDTVA 64

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLS ILRTNAVNDFSF RVPSDYYDW+LEARRDVL+AAS+DHLCKSIVLVNTQA SHVVD
Sbjct: 65  RLSAILRTNAVNDFSFKRVPSDYYDWALEARRDVLDAASIDHLCKSIVLVNTQAPSHVVD 124

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CS+RNNSKYY+VVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY H
Sbjct: 125 CSDRNNSKYYIVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEH 184

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           N VTCIGMKTDIPVILDEAI KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Sbjct: 185 NGVTCIGMKTDIPVILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS 242

[Close]

BLAST of CmaCh06G007770 vs. ExPASy TrEMBL
Match: A0A0A0L4A0 (tRNA_edit domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G020620 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 187/239 (78.24%), Postives = 203/239 (84.94%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKA-DGDTV 60
           MGTE+ A+AE+NSMEA                 L+L  LPNLDS PS + SD A D DTV
Sbjct: 1   MGTESEAMAEQNSMEA---------------QNLDLKCLPNLDSPPSSVPSDGADDDDTV 60

Query: 61  SRLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVV 120
           +RLS IL TNAVNDFSF RVPSDYYDW LEARRDVL+AAS+DHLCKSIVLVNTQA SH+V
Sbjct: 61  ARLSAILTTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLCKSIVLVNTQAPSHIV 120

Query: 121 DCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYV 180
           DCS+RNNSKYY+VVVQY+AKFNAET+RSFLYSLNDGKI KKKFNLRLAPEEISA+LTGY 
Sbjct: 121 DCSDRNNSKYYIVVVQYTAKFNAETIRSFLYSLNDGKIAKKKFNLRLAPEEISAKLTGYE 180

Query: 181 HNAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           HN VTCIGMKTDIPVILDEAI KL+PDYFWLGGGE DLKLGIRTSEFIN+VKPFIIKCS
Sbjct: 181 HNGVTCIGMKTDIPVILDEAIVKLNPDYFWLGGGETDLKLGIRTSEFINYVKPFIIKCS 224

[Close]

BLAST of CmaCh06G007770 vs. ExPASy TrEMBL
Match: A0A6P4API6 (uncharacterized protein LOC107433473 OS=Ziziphus jujuba OX=326968 GN=LOC107433473 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90
Identity = 171/228 (75.00%), Postives = 194/228 (85.09%), Query Frame = 0


Query: 15  EALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSD----KADGDTVSRLSTILRTNA 74
           E+LA+LE  QT I+ RIS LEL++L N DS P P +SD     A+ DT + LS ILRT+ 
Sbjct: 3   ESLAELERIQTRILQRISALELSHLHNPDSAPFPSTSDHSNYDAEADTEAHLSAILRTHG 62

Query: 75  VNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYY 134
           VNDFSF +VP DYYDW LEARR+ L AASVDHLCKSIVLVNTQAQS++VDCS+  NSKYY
Sbjct: 63  VNDFSFKKVPGDYYDWPLEARREALAAASVDHLCKSIVLVNTQAQSNIVDCSDHRNSKYY 122

Query: 135 VVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKT 194
           VVVVQY+A+FNAETV++FLY LN+GKI KKKFNLRLAPEEIS +LTGY HNAVTCIGMKT
Sbjct: 123 VVVVQYTARFNAETVKNFLYLLNNGKIAKKKFNLRLAPEEISVKLTGYEHNAVTCIGMKT 182

Query: 195 DIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           DIPVILDEAIAKL PD+FWLGGGE DLKLGI+TSEFINFVKPFI+ CS
Sbjct: 183 DIPVILDEAIAKLDPDFFWLGGGETDLKLGIKTSEFINFVKPFIVNCS 230

[Close]

BLAST of CmaCh06G007770 vs. NCBI nr
Match: XP_023005520.1 (uncharacterized protein LOC111498483 [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS
Sbjct: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. NCBI nr
Match: XP_023538668.1 (uncharacterized protein LOC111799544 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127
Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGA+AERNSMEALAKLEYRQTLIINRI KLELAYLPNLDSEPSPISSD+ADGDTVS
Sbjct: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVS 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSF RVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. NCBI nr
Match: XP_022951583.1 (uncharacterized protein LOC111454353 [Cucurbita moschata] >KAG7028382.1 hypothetical protein SDJN02_09563 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.2 bits (1193), Expect = 7.0e-127
Identity = 233/238 (97.90%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGA+AERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISS+ ADGDTV+
Sbjct: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSEGADGDTVA 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSF RVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. NCBI nr
Match: KAG6596854.1 (hypothetical protein SDJN03_10034, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 427.9 bits (1099), Expect = 5.6e-116
Identity = 219/232 (94.40%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTEAGA+AERNSMEALAKLEYRQT IINRISKLELAYLPNLDSEPSPISSD+ADGDTVS
Sbjct: 1   MGTEAGAMAERNSMEALAKLEYRQTQIINRISKLELAYLPNLDSEPSPISSDEADGDTVS 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLSTILRTNAVNDFSF RV SDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD
Sbjct: 61  RLSTILRTNAVNDFSFKRVSSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH
Sbjct: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKP 233
           NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKL  R S F  F  P
Sbjct: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLA-RESVFSQFALP 231

[Close]

BLAST of CmaCh06G007770 vs. NCBI nr
Match: XP_038903466.1 (uncharacterized protein LOC120090048 [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 4.1e-111
Identity = 203/238 (85.29%), Postives = 221/238 (92.86%), Query Frame = 0


Query: 1   MGTEAGAIAERNSMEALAKLEYRQTLIINRISKLELAYLPNLDSEPSPISSDKADGDTVS 60
           MGTE+ A+AE+N MEALAKLE+RQTLI++RISKLELAYLPNLDS  S + SD  DGDTV+
Sbjct: 1   MGTESEAMAEQNYMEALAKLEHRQTLILHRISKLELAYLPNLDSATSSVPSDGEDGDTVA 60

Query: 61  RLSTILRTNAVNDFSFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLS ILRTN+VNDFSF RVPSDYYDW LEARRDVL+AASVDHLCKSIVLVNTQA SHVVD
Sbjct: 61  RLSAILRTNSVNDFSFKRVPSDYYDWPLEARRDVLDAASVDHLCKSIVLVNTQAPSHVVD 120

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CS+RNNSKYY+VVVQY+AKFNAETV+SFLYSLNDGKI KKKFNLRLAPEE SA+LTGY H
Sbjct: 121 CSDRNNSKYYIVVVQYTAKFNAETVKSFLYSLNDGKIAKKKFNLRLAPEETSAKLTGYEH 180

Query: 181 NAVTCIGMKTDIPVILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           N VTCIGM+TDIPVILDEAI KL+PDYFWLGGGE+DLKLGIRTSEFINFVKPFIIKCS
Sbjct: 181 NGVTCIGMRTDIPVILDEAIVKLNPDYFWLGGGEIDLKLGIRTSEFINFVKPFIIKCS 238

[Close]

BLAST of CmaCh06G007770 vs. TAIR 10
Match: AT4G16510.1 (YbaK/aminoacyl-tRNA synthetase-associated domain )

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-86
Identity = 156/224 (69.64%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 16  ALAKLEYRQTLIINRISKLELAYLP-NLDSEPSPISSDKADGDTVSRLSTILRTNAVNDF 75
           A A+LE  Q  I+++IS LE ++LP N  + PSP S    + +TV+RLSTIL++  VNDF
Sbjct: 10  AAAELERLQIEILHKISILESSFLPQNSSAAPSP-SLPVDENETVTRLSTILQSGGVNDF 69

Query: 76  SFNRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVVVV 135
            F RV +DYYDW LE+RRDVL A+SVDHLCKSIVLVNTQA S+++DCS+ NNSKYYVVVV
Sbjct: 70  CFKRVATDYYDWPLESRRDVLGASSVDHLCKSIVLVNTQAASNILDCSDPNNSKYYVVVV 129

Query: 136 QYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDIPV 195
           QY+A+FNAE V+ FLYSLN+GKIPKK+FNLRLAPEE S +LTG+ HN VTCIGMKT+IPV
Sbjct: 130 QYTARFNAEAVKQFLYSLNEGKIPKKRFNLRLAPEETSIKLTGFEHNGVTCIGMKTNIPV 189

Query: 196 ILDEAIAKLSPDYFWLGGGEVDLKLGIRTSEFINFVKPFIIKCS 239
           ILDEAI KL PD+FWLGGGE+DLKLG+RTSEF+ FVKPFI+ CS
Sbjct: 190 ILDEAITKLKPDFFWLGGGEIDLKLGVRTSEFLEFVKPFIVPCS 232

The following BLAST results are available for this feature:

BLAST of CmaCh06G007770 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh06G007770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXM4	7.3e-130	100.00	uncharacterized protein LOC111498483 OS=Cucurbita maxima OX=3661 GN=LOC111498483...	[more]
A0A6J1GI39	3.4e-127	97.90	uncharacterized protein LOC111454353 OS=Cucurbita moschata OX=3662 GN=LOC1114543...	[more]
A0A1S3BLB4	5.8e-111	84.45	uncharacterized protein LOC103490895 OS=Cucumis melo OX=3656 GN=LOC103490895 PE=...	[more]
A0A0A0L4A0	1.5e-98	78.24	tRNA_edit domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G020620 P...	[more]
A0A6P4API6	1.5e-90	75.00	uncharacterized protein LOC107433473 OS=Ziziphus jujuba OX=326968 GN=LOC10743347...	[more]

BLAST of CmaCh06G007770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005520.1	1.5e-129	100.00	uncharacterized protein LOC111498483 [Cucurbita maxima]	[more]
XP_023538668.1	2.4e-127	98.32	uncharacterized protein LOC111799544 [Cucurbita pepo subsp. pepo]	[more]
XP_022951583.1	7.0e-127	97.90	uncharacterized protein LOC111454353 [Cucurbita moschata] >KAG7028382.1 hypothet...	[more]
KAG6596854.1	5.6e-116	94.40	hypothetical protein SDJN03_10034, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038903466.1	4.1e-111	85.29	uncharacterized protein LOC120090048 [Benincasa hispida]	[more]

BLAST of CmaCh06G007770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16510.1	1.7e-86	69.64	YbaK/aminoacyl-tRNA synthetase-associated domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007214	YbaK/aminoacyl-tRNA synthetase-associated domain	PFAM	PF04073	tRNA_edit	coord: 103..229 e-value: 2.3E-8 score: 34.1
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	GENE3D	3.90.960.10		coord: 72..238 e-value: 2.4E-29 score: 104.0
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	SUPERFAMILY	55826	YbaK/ProRS associated domain	coord: 73..235
None	No IPR available	PANTHER	PTHR30411	UNCHARACTERIZED	coord: 14..238
None	No IPR available	PANTHER	PTHR30411:SF4	YBAK/AMINOACYL-TRNA SYNTHETASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN	coord: 14..238
None	No IPR available	CDD	cd04332	YbaK_like	coord: 87..235 e-value: 1.70302E-20 score: 82.2057

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G007770.1	CmaCh06G007770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity