CmaCh06G005990 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACAGAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGTCCGCGATAAAACTCACTGCGTTCCTCCGCCTCTGCGTCTCTCGTCGACAAAATTCCCGACGGCTGCGATCATTCGGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCCTAGAAGATGAGAGAATAGTTGAGAATCGTTCCGTCAGAAAGCTTGAGCGTGCTTCGAGTTCAAGCTATGTAAATTTTGAAGACGATGTCGATAAGCGATCTCAGATTTTTATCGATAAATTTCTCCGTCAATTGAGGTTAGAACGACAAATTTCTTTGCAATTAAGATACTGTAGAATCAATAGCTCTGAAACGGAATCTGAAGAGAAATCGCCGCCGTATCCGTCGATTCGATGA ATGGCACAGAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGTCCGCGATAAAACTCACTGCGTTCCTCCGCCTCTGCGTCTCTCGTCGACAAAATTCCCGACGGCTGCGATCATTCGGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCCTAGAAGATGAGAGAATAGTTGAGAATCGTTCCGTCAGAAAGCTTGAGCGTGCTTCGAGTTCAAGCTATGTAAATTTTGAAGACGATGTCGATAAGCGATCTCAGATTTTTATCGATAAATTTCTCCGTCAATTGAGGTTAGAACGACAAATTTCTTTGCAATTAAGATACTGTAGAATCAATAGCTCTGAAACGGAATCTGAAGAGAAATCGCCGCCGTATCCGTCGATTCGATGA ATGGCACAGAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGTCCGCGATAAAACTCACTGCGTTCCTCCGCCTCTGCGTCTCTCGTCGACAAAATTCCCGACGGCTGCGATCATTCGGTTCCGACGATCGGACGGTAGGGCTACGGAGTTTCCTAGAAGATGAGAGAATAGTTGAGAATCGTTCCGTCAGAAAGCTTGAGCGTGCTTCGAGTTCAAGCTATGTAAATTTTGAAGACGATGTCGATAAGCGATCTCAGATTTTTATCGATAAATTTCTCCGTCAATTGAGGTTAGAACGACAAATTTCTTTGCAATTAAGATACTGTAGAATCAATAGCTCTGAAACGGAATCTGAAGAGAAATCGCCGCCGTATCCGTCGATTCGATGA MAQKKSPLLFRLKKSAIKLTAFLRLCVSRRQNSRRLRSFGSDDRTVGLRSFLEDERIVENRSVRKLERASSSSYVNFEDDVDKRSQIFIDKFLRQLRLERQISLQLRYCRINSSETESEEKSPPYPSIR Homology
BLAST of CmaCh06G005990 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 8.7e-37 Identity = 94/130 (72.31%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of CmaCh06G005990 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of CmaCh06G005990 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.0e-29 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of CmaCh06G005990 vs. ExPASy TrEMBL
Match: A0A1R3J730 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19032 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 56/125 (44.80%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of CmaCh06G005990 vs. ExPASy TrEMBL
Match: A0A1R3IU67 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09786 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12 Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of CmaCh06G005990 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.3 bits (604), Expect = 7.5e-59 Identity = 125/129 (96.90%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of CmaCh06G005990 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia]) HSP 1 Score: 162.9 bits (411), Expect = 1.8e-36 Identity = 94/130 (72.31%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of CmaCh06G005990 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 146.0 bits (367), Expect = 2.3e-31 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of CmaCh06G005990 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.9 bits (346), Expect = 6.2e-29 Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 0
BLAST of CmaCh06G005990 vs. NCBI nr
Match: KAG6577759.1 (hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 3.1e-28 Identity = 78/127 (61.42%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of CmaCh06G005990 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.7e-05 Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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