CmaCh06G005190 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G005190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionHydroxyproline-rich glycoprotein family protein
LocationCma_Chr06: 2429356 .. 2430198 (-)
RNA-Seq ExpressionCmaCh06G005190
SyntenyCmaCh06G005190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

mRNA sequence

ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

Coding sequence (CDS)

ATGGCCTCTTCATCGGACAATCAACAATCCAAATCCAAATCCACCGACTCCCAACCTCTTCCGCCGCCCTCCGCCGCACACAACCCACCTCCGATCTACCCTCCTCCCACCATGGGGTACCCTCCAGCCCCACATCCGGGGTACCCTCCAGCGCCAGGGGCTTACCCACCATACAATGGCTACGCCTACGCCCAAGCCCCTCCCACAGCCTATTACCACAACAGCCCCCAAAATTACGGGGTGGAGCCGTTTCACGCCGCCTTAATCCGCGGCATTGTCACCGCCTTAATAATTCTGGTGGTTCTAATGATGCTCTCCAGCATAATCACCTGGATCATCCTCCGACCAGAAATCCCAACGTTCAGAGTTGATACCTTGGGCGTCACCAATTTTAACATCTCCAAATCGAATTACTCCGGAAACTGGAACGCGACCTTGGTGGTGCAGAATCCCAACAAGAAACTGAACCTGACTTTCAAGCGGATCCAGGGGTTCGTGGGCTATAAGGACAACACGCTGGCGATGTCGTTTGCGGACCCATTTTTTCTTGGTGTGGAGAGGACTAACCTAATGCGGGTAAGATGGACGTCGAGTAGCCCTGATGATCCGGGGCATTGGGAGGAGACGGAGGAGAAATTGGGGAAGGAGAAGGCGACGAGGAAAGTGAGTTTCAATTTGAGATTCTTCGTATGGACCACTTTCCAATCTGGGTCTTGGTGGACCAGGCACGTTATTTTGAGAGTCTTTTGTGACGATTTGAAGATCGACTTCGGCACCCCCAACTCCGTTAATGGCTCCTTCTCCGCCTATGGCCACCACATGCATTGCACGGTTCTCATGTAG

Protein sequence

MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM
Homology
BLAST of CmaCh06G005190 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 51/220 (23.18%), Postives = 98/220 (44.55%), Query Frame = 0

Query: 54  AYPPYNGYAYA-QAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWI 113
           A  P NG  Y    PP A      + +G       L+   V  +I L+V++ ++++I W+
Sbjct: 3   AEQPLNGAFYGPSVPPPAPKGYYRRGHG-RGCGCCLLSLFVKVIISLIVILGVAALIFWL 62

Query: 114 ILRPEIPTFRVDTLGVTNFNISKSNYSGNWN--ATLVVQNPNKKLNLTFKRIQGFVGYKD 173
           I+RP    F V    +T F+ +  +    +N   T+ V+NPNK++ L + RI+    Y+ 
Sbjct: 63  IVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEG 122

Query: 174 NTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFV 233
              +     PF+ G + T ++   +   +       +     L  E+ +   +  ++F +
Sbjct: 123 KRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ--SRTLNAERISGVYNIEIKFRL 182

Query: 234 WTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAY 271
              F+ G    R +  +V CDDL++   T N    + + +
Sbjct: 183 RVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

BLAST of CmaCh06G005190 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 55/227 (24.23%), Postives = 95/227 (41.85%), Query Frame = 0

Query: 46  PGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMML 105
           P  PP P A+  YN      +P       S     +      ++  I   LI + V++ +
Sbjct: 15  PSIPPPPKAHRSYN------SPGFGCCCFSCLGSCLRCCGCCILSLICNILIAVAVILGV 74

Query: 106 SSIITWIILRPEIPTFRVDTLGVTNFNISKSN---YSGNWNATLVVQNPNKKLNLTFKRI 165
           +++I W+I RP    F V    +  F+   +N   YS + N T  ++NPN+++ + +   
Sbjct: 75  AALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFT--IRNPNQRVGVYYDEF 134

Query: 166 QGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEET----EEKLGKEKA 225
                Y D     +    F+ G + T ++  +    +    G    T    +EK G  + 
Sbjct: 135 SVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRI 194

Query: 226 TRKVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNG 266
             K+  ++RF  W      SW  +    ++ CDDLKI  G+ NS  G
Sbjct: 195 NAKLRLSVRFKFWFI---KSWKLKP---KIKCDDLKIPLGSSNSTGG 227

BLAST of CmaCh06G005190 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.0e-04
Identity = 31/119 (26.05%), Postives = 65/119 (54.62%), Query Frame = 0

Query: 96  LIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISK-SNYSGNWNATLVVQNPNKK 155
           L++LVV +  S  I +++ +P++P + +D L +T F +++ S+ +  +N T+  +NPN+K
Sbjct: 73  LLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNPNEK 132

Query: 156 LNLTFKRIQGF-VGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEK 213
           + + ++      V Y ++ L+      F+ G E T ++ V  T  + +  G     EE+
Sbjct: 133 IGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQ 191

BLAST of CmaCh06G005190 vs. ExPASy TrEMBL
Match: A0A6J1L2Y7 (uncharacterized protein LOC111498631 OS=Cucurbita maxima OX=3661 GN=LOC111498631 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 3.7e-157
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60
           MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG
Sbjct: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60

Query: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120
           YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT
Sbjct: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120

Query: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180
           FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP
Sbjct: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180

Query: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240
           FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW
Sbjct: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240

Query: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM
Sbjct: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 280

BLAST of CmaCh06G005190 vs. ExPASy TrEMBL
Match: A0A6J1FNP1 (uncharacterized protein LOC111447106 OS=Cucurbita moschata OX=3662 GN=LOC111447106 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149
Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0

Query: 1   MASSSDNQQ--SKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60
           MASSSDNQQ  SKSKSTDSQPLPPPSAAHNP PIYPPPTMGYPPAPHPGYPPAPGAYPPY
Sbjct: 1   MASSSDNQQSKSKSKSTDSQPLPPPSAAHNPAPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60

Query: 61  NGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEI 120
           NGYAYAQAPP AYYHNSPQNY VEPFHA+ IRGIVTALIILVVLMML+SIITWIILRPEI
Sbjct: 61  NGYAYAQAPPAAYYHNSPQNYAVEPFHASFIRGIVTALIILVVLMMLTSIITWIILRPEI 120

Query: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180
           PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA
Sbjct: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180

Query: 181 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 240
           DPFFL VERTNLMRVRWTSSSPDDPG+WEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS
Sbjct: 181 DPFFLAVERTNLMRVRWTSSSPDDPGNWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 240

Query: 241 WWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           WWTRHVILRVFCDDLKIDFGTPNSVNGSFSA+GHHMHC VLM
Sbjct: 241 WWTRHVILRVFCDDLKIDFGTPNSVNGSFSAHGHHMHCAVLM 282

BLAST of CmaCh06G005190 vs. ExPASy TrEMBL
Match: A0A0A0LGS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780530 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93
Identity = 182/293 (62.12%), Postives = 224/293 (76.45%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT--------------MGYPPAPHP 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT              MGYPP P P
Sbjct: 1   MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPHGHGYSPAMGYPPPPPP 60

Query: 61  GYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLS 120
           GYPPAPG YPPYN Y YAQAPP AYY N+PQNY  +   A  +RGIVTALI+LV +M LS
Sbjct: 61  GYPPAPGNYPPYNTY-YAQAPPAAYY-NNPQNYRAQTVSAGFLRGIVTALILLVAVMTLS 120

Query: 121 SIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFV 180
           SIITWI+LRP+IP F+VD+  V+NFNISK NYSGNWN +L V+NPN KL +  +RIQ FV
Sbjct: 121 SIITWIVLRPQIPVFKVDSFSVSNFNISKLNYSGNWNGSLTVENPNHKLTVNIERIQSFV 180

Query: 181 GYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNL 240
            YK+NTLAMS+ADPFF+ VE+++ MRV+ TSSSPDDPG+W ETEEK+G+EKA+  VSFNL
Sbjct: 181 NYKENTLAMSYADPFFIDVEKSSQMRVKLTSSSPDDPGNWLETEEKVGQEKASGTVSFNL 240

Query: 241 RFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVL 280
           RFF WT F+SGSWWTR ++++VFC+DLK+ F  P + +G + A  H   C+VL
Sbjct: 241 RFFAWTAFRSGSWWTRRIVMKVFCEDLKLAFTGPAATHGVYLADAHSKTCSVL 291

BLAST of CmaCh06G005190 vs. ExPASy TrEMBL
Match: A0A5A7TLT1 (Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 5.4e-92
Identity = 183/295 (62.03%), Postives = 222/295 (75.25%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT---------------MGYPPAPH 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT               MGYPPAPH
Sbjct: 306 MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPQGHGGYSPAMGYPPAPH 365

Query: 61  PGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMML 120
           P YPPA G YPPYN Y YAQAPP AYY N+PQNY      A  +RGIV ALI+LV +M L
Sbjct: 366 PRYPPATGNYPPYNAY-YAQAPPAAYY-NNPQNYRAGTISAGFLRGIVAALILLVAIMTL 425

Query: 121 SSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGF 180
           SSIITWIILRPE+P F+VD+  V+NFNISK NYSGNW+A++ VQNPN KLN+  +RIQ F
Sbjct: 426 SSIITWIILRPEVPVFKVDSFSVSNFNISKLNYSGNWDASVTVQNPNHKLNVNMERIQSF 485

Query: 181 VGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFN 240
           V YK NTLAMS+ADPFFL VE++  M+V+ TSSSPDDPG+W ETEEKLG+E+AT  VSFN
Sbjct: 486 VDYKQNTLAMSYADPFFLDVEKSGQMKVKLTSSSPDDPGNWLETEEKLGRERATGTVSFN 545

Query: 241 LRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           LRFF WTTF++GSWWTR V++RV C+D+K+ F  P + +  + A  H   C+VL+
Sbjct: 546 LRFFAWTTFRTGSWWTRRVVMRVSCEDMKLVFTGPAAGHAVYLADEHSKTCSVLV 598

BLAST of CmaCh06G005190 vs. ExPASy TrEMBL
Match: A0A1S3B6W4 (uncharacterized protein LOC103486674 OS=Cucumis melo OX=3656 GN=LOC103486674 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 5.4e-92
Identity = 183/295 (62.03%), Postives = 222/295 (75.25%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPT---------------MGYPPAPH 60
           MASSS++QQS+SK+TD  P  P SA +NPPP+YPPPT               MGYPPAPH
Sbjct: 1   MASSSEDQQSQSKATDPPPPHPSSAGNNPPPVYPPPTLGYPPPQGHGGYSPAMGYPPAPH 60

Query: 61  PGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMML 120
           P YPPA G YPPYN Y YAQAPP AYY N+PQNY      A  +RGIV ALI+LV +M L
Sbjct: 61  PRYPPATGNYPPYNAY-YAQAPPAAYY-NNPQNYRAGTISAGFLRGIVAALILLVAIMTL 120

Query: 121 SSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGF 180
           SSIITWIILRPE+P F+VD+  V+NFNISK NYSGNW+A++ VQNPN KLN+  +RIQ F
Sbjct: 121 SSIITWIILRPEVPVFKVDSFSVSNFNISKLNYSGNWDASVTVQNPNHKLNVNMERIQSF 180

Query: 181 VGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFN 240
           V YK NTLAMS+ADPFFL VE++  M+V+ TSSSPDDPG+W ETEEKLG+E+AT  VSFN
Sbjct: 181 VDYKQNTLAMSYADPFFLDVEKSGQMKVKLTSSSPDDPGNWLETEEKLGRERATGTVSFN 240

Query: 241 LRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           LRFF WTTF++GSWWTR V++RV C+D+K+ F  P + +  + A  H   C+VL+
Sbjct: 241 LRFFAWTTFRTGSWWTRRVVMRVSCEDMKLVFTGPAAGHAVYLADEHSKTCSVLV 293

BLAST of CmaCh06G005190 vs. NCBI nr
Match: XP_023005718.1 (uncharacterized protein LOC111498631 [Cucurbita maxima])

HSP 1 Score: 563.9 bits (1452), Expect = 7.6e-157
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60
           MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG
Sbjct: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60

Query: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120
           YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT
Sbjct: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120

Query: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180
           FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP
Sbjct: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180

Query: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240
           FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW
Sbjct: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240

Query: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM
Sbjct: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 280

BLAST of CmaCh06G005190 vs. NCBI nr
Match: XP_023539989.1 (uncharacterized protein LOC111800503 [Cucurbita pepo subsp. pepo] >XP_023539990.1 uncharacterized protein LOC111800503 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.7 bits (1410), Expect = 5.7e-152
Identity = 272/280 (97.14%), Postives = 274/280 (97.86%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60
           MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG
Sbjct: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60

Query: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120
           YAYAQAPP AYYHNSPQNY VEPFHAA IRGIVTALIILVVLMMLSSIITWIILRPEIPT
Sbjct: 61  YAYAQAPPAAYYHNSPQNYAVEPFHAAFIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120

Query: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180
           FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP
Sbjct: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180

Query: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240
           FFL VERTNLMRVRWTSSSPDDPG+WEETEEKLGKEKATRKV FNLRFFVWTTFQSGSWW
Sbjct: 181 FFLAVERTNLMRVRWTSSSPDDPGNWEETEEKLGKEKATRKVGFNLRFFVWTTFQSGSWW 240

Query: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           TRHVILRVFCDDLKIDFGTPNSVNGSFSA+GHHMHC VLM
Sbjct: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAHGHHMHCAVLM 280

BLAST of CmaCh06G005190 vs. NCBI nr
Match: KAG7028149.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 544.7 bits (1402), Expect = 4.8e-151
Identity = 270/278 (97.12%), Postives = 273/278 (98.20%), Query Frame = 0

Query: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60
           MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG
Sbjct: 1   MASSSDNQQSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPYNG 60

Query: 61  YAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPT 120
           YAYAQAPP AYYHNSPQNY VEPFHAA IRGIVTALIILVVLMML+SIITWIILRPEIPT
Sbjct: 61  YAYAQAPPAAYYHNSPQNYAVEPFHAAFIRGIVTALIILVVLMMLTSIITWIILRPEIPT 120

Query: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180
           FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP
Sbjct: 121 FRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 180

Query: 181 FFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240
           FFL VERTNLMRVRWTSSSPDDPG+WEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW
Sbjct: 181 FFLAVERTNLMRVRWTSSSPDDPGNWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWW 240

Query: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTV 279
           TRHVILRVFCDDLKIDFGTPNSVNGSFSA+GHHMHC V
Sbjct: 241 TRHVILRVFCDDLKIDFGTPNSVNGSFSAHGHHMHCAV 278

BLAST of CmaCh06G005190 vs. NCBI nr
Match: XP_022941877.1 (uncharacterized protein LOC111447106 [Cucurbita moschata])

HSP 1 Score: 538.9 bits (1387), Expect = 2.6e-149
Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0

Query: 1   MASSSDNQQ--SKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60
           MASSSDNQQ  SKSKSTDSQPLPPPSAAHNP PIYPPPTMGYPPAPHPGYPPAPGAYPPY
Sbjct: 1   MASSSDNQQSKSKSKSTDSQPLPPPSAAHNPAPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60

Query: 61  NGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEI 120
           NGYAYAQAPP AYYHNSPQNY VEPFHA+ IRGIVTALIILVVLMML+SIITWIILRPEI
Sbjct: 61  NGYAYAQAPPAAYYHNSPQNYAVEPFHASFIRGIVTALIILVVLMMLTSIITWIILRPEI 120

Query: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180
           PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA
Sbjct: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180

Query: 181 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 240
           DPFFL VERTNLMRVRWTSSSPDDPG+WEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS
Sbjct: 181 DPFFLAVERTNLMRVRWTSSSPDDPGNWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 240

Query: 241 WWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHHMHCTVLM 281
           WWTRHVILRVFCDDLKIDFGTPNSVNGSFSA+GHHMHC VLM
Sbjct: 241 WWTRHVILRVFCDDLKIDFGTPNSVNGSFSAHGHHMHCAVLM 282

BLAST of CmaCh06G005190 vs. NCBI nr
Match: KAG6596613.1 (hypothetical protein SDJN03_09793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-112
Identity = 218/235 (92.77%), Postives = 221/235 (94.04%), Query Frame = 0

Query: 1   MASSSDNQQ--SKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60
           MASSSDNQQ  SKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPY
Sbjct: 1   MASSSDNQQSKSKSKSTDSQPLPPPSAAHNPPPIYPPPTMGYPPAPHPGYPPAPGAYPPY 60

Query: 61  NGYAYAQAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWIILRPEI 120
           NGYAYAQAPP AYYHNSPQNY VEPFHAA IRGIVTALIILVVLMML+SIITWIILRPEI
Sbjct: 61  NGYAYAQAPPAAYYHNSPQNYAVEPFHAAFIRGIVTALIILVVLMMLTSIITWIILRPEI 120

Query: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180
           PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA
Sbjct: 121 PTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFA 180

Query: 181 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTT 234
           DPFFL VERTNLMRVRWTSSSPDDPG+WEETEEKLGKEKATRK   N R   W +
Sbjct: 181 DPFFLAVERTNLMRVRWTSSSPDDPGNWEETEEKLGKEKATRK---NYRLCSWVS 232

BLAST of CmaCh06G005190 vs. TAIR 10
Match: AT3G52460.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 154.8 bits (390), Expect = 9.9e-38
Identity = 102/259 (39.38%), Postives = 145/259 (55.98%), Query Frame = 0

Query: 17  SQPLPPPSAAHNPPPIYP----PPTMGY-----PPAPHPGYPPAPGAYPPYNGYAYAQAP 76
           +QP PPP  +  PPP       PP MGY     PP P+P YP A     PY  Y YAQAP
Sbjct: 26  NQPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPPPYPNYPNA-----PYQQYPYAQAP 85

Query: 77  PTAYYHNS---PQNYGVE-PFHAALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRV 136
           P +YY +S    QN   + P  +  +RGI T LI+LVVL+ +S+ ITW++LRP+IP F V
Sbjct: 86  PASYYGSSYPAQQNPVYQRPASSGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSV 145

Query: 137 DTLGVTNFNISKSNYSGNWNATLVVQNPNKKLNLTFKRIQGFVGY-----KDNTLAMSFA 196
           +   V+NFN++   +S  W A L ++N N KL   F RIQG V +     +D  LA +F 
Sbjct: 146 NNFSVSNFNVTGPVFSAQWTANLTIENQNTKLKGYFDRIQGLVYHQNAVGEDEFLATAFF 205

Query: 197 DPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFVWTTFQSGS 256
            P F+  +++ ++    T+   + P       +++ KE+ T  V+F+LR  VW TF++  
Sbjct: 206 QPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDG 265

Query: 257 WWTRHVILRVFCDDLKIDF 258
           W  R   L+VFC  LK+ F
Sbjct: 266 WAARESGLKVFCGKLKVGF 279

BLAST of CmaCh06G005190 vs. TAIR 10
Match: AT2G27260.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-16
Identity = 71/243 (29.22%), Postives = 118/243 (48.56%), Query Frame = 0

Query: 36  PTMGYPPAPHPGYPPAPGAYPPYNGYAYAQAPPTAYYHNSPQNYGVEPF-HAALIRGIVT 95
           P  GY P P+P YP      PP NGY    A     Y N    Y  +P   A +IR +  
Sbjct: 7   PATGY-PYPYP-YPNPQQQQPPTNGYPNPAAGTAYPYQNHNPYYAPQPNPRAVIIRRLFI 66

Query: 96  ALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNYSGNWNATLVVQNPNKK 155
                ++L+ L   I ++I+RP++P   +++L V+NFN+S +  SG W+  L  +NPN K
Sbjct: 67  VFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSK 126

Query: 156 LNLTFKRIQGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLG 215
           ++L ++     + Y   +L+ +   PF  G +   ++    + S     G      + +G
Sbjct: 127 MSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDG---RLVDSIG 186

Query: 216 KEKATR-KVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAYGHH 275
           KE++ +  V F+LR   + TF+ G++  R  +  V+CDD+ +  G P S +G     G  
Sbjct: 187 KERSVKGNVEFDLRMISYVTFRYGAFRRRRYV-TVYCDDVAV--GVPVS-SGEGKMVGSS 240

Query: 276 MHC 277
             C
Sbjct: 247 KRC 240

BLAST of CmaCh06G005190 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 65.5 bits (158), Expect = 7.9e-11
Identity = 42/181 (23.20%), Postives = 86/181 (47.51%), Query Frame = 0

Query: 87  ALIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSNY-SGNWNAT 146
           +LI  I   ++ L+ +  +  +ITW+  +P+   + V+   V NFN++  N+ S  +  T
Sbjct: 24  SLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFT 83

Query: 147 LVVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGH 206
           +   NPN ++++ +  ++ FV +KD TLA    +PF     R N+ ++  T  + ++   
Sbjct: 84  IQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFH--QPRMNVKQIDETLIA-ENVAV 143

Query: 207 WEETEEKLGKEKATRKVSFNLRFFVWTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNG 266
            +   + L  + +  K+ F +       F+ G W + H   ++ C  + +    PN    
Sbjct: 144 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 201

BLAST of CmaCh06G005190 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-08
Identity = 51/220 (23.18%), Postives = 98/220 (44.55%), Query Frame = 0

Query: 54  AYPPYNGYAYA-QAPPTAYYHNSPQNYGVEPFHAALIRGIVTALIILVVLMMLSSIITWI 113
           A  P NG  Y    PP A      + +G       L+   V  +I L+V++ ++++I W+
Sbjct: 3   AEQPLNGAFYGPSVPPPAPKGYYRRGHG-RGCGCCLLSLFVKVIISLIVILGVAALIFWL 62

Query: 114 ILRPEIPTFRVDTLGVTNFNISKSNYSGNWN--ATLVVQNPNKKLNLTFKRIQGFVGYKD 173
           I+RP    F V    +T F+ +  +    +N   T+ V+NPNK++ L + RI+    Y+ 
Sbjct: 63  IVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEG 122

Query: 174 NTLAMSFADPFFLGVERTNLMRVRWTSSSPDDPGHWEETEEKLGKEKATRKVSFNLRFFV 233
              +     PF+ G + T ++   +   +       +     L  E+ +   +  ++F +
Sbjct: 123 KRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ--SRTLNAERISGVYNIEIKFRL 182

Query: 234 WTTFQSGSWWTRHVILRVFCDDLKIDFGTPNSVNGSFSAY 271
              F+ G    R +  +V CDDL++   T N    + + +
Sbjct: 183 RVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

BLAST of CmaCh06G005190 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 26/94 (27.66%), Postives = 53/94 (56.38%), Query Frame = 0

Query: 88  LIRGIVTALIILVVLMMLSSIITWIILRPEIPTFRVDTLGVTNFNISKSN-YSGNWNATL 147
           ++R +  A+I  +V+++++  + W+ILRP  P F +    V  FN+S+ N  + N+  T+
Sbjct: 15  VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTI 74

Query: 148 VVQNPNKKLNLTFKRIQGFVGYKDNTLAMSFADP 181
             +NPN K+ + + R+  +  Y +  + +  A P
Sbjct: 75  ASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIP 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SJ522.3e-0723.18NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
Q9SRN12.4e-0424.23NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1[more]
Q8LD987.0e-0426.05NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1L2Y73.7e-157100.00uncharacterized protein LOC111498631 OS=Cucurbita maxima OX=3661 GN=LOC111498631... [more]
A0A6J1FNP11.3e-14995.74uncharacterized protein LOC111447106 OS=Cucurbita moschata OX=3662 GN=LOC1114471... [more]
A0A0A0LGS81.3e-9362.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780530 PE=4 SV=1[more]
A0A5A7TLT15.4e-9262.03Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 ... [more]
A0A1S3B6W45.4e-9262.03uncharacterized protein LOC103486674 OS=Cucumis melo OX=3656 GN=LOC103486674 PE=... [more]
Match NameE-valueIdentityDescription
XP_023005718.17.6e-157100.00uncharacterized protein LOC111498631 [Cucurbita maxima][more]
XP_023539989.15.7e-15297.14uncharacterized protein LOC111800503 [Cucurbita pepo subsp. pepo] >XP_023539990.... [more]
KAG7028149.14.8e-15197.12NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022941877.12.6e-14995.74uncharacterized protein LOC111447106 [Cucurbita moschata][more]
KAG6596613.11.5e-11292.77hypothetical protein SDJN03_09793, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT3G52460.19.9e-3839.38hydroxyproline-rich glycoprotein family protein [more]
AT2G27260.12.8e-1629.22Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT5G22870.17.9e-1123.20Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G35980.11.7e-0823.18Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G52470.11.2e-0627.66Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR31852:SF183HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 45..258
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 45..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G005190.1CmaCh06G005190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane