CmaCh06G005130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G005130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NDR1/HIN1-like protein 3
Location	Cma_Chr06: 2416590 .. 2417159 (-)
RNA-Seq Expression	CmaCh06G005130
Synteny	CmaCh06G005130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGAACAAAGAAATGCATGATCATTTTCTTGATTATCATCTTAGTTTTAGTTCTTCTTTCGTTGTTAATCGTCTGGCTCATCACCATGGCTAACAAGATCAAATTCCATGTGATCGGCGCCGACCTGACCCAATTCAACTTCACGGACGACAACCAACTCCTGTTCGACCTGACCGTGAACATGAAAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACCGCATCGAAGTGACCTTGTTGTATCAAGACATAAAGTTTAGTAACGCGTCGATGTCACCTTTCTACCAAGGCCAAGATGGGTCGAAGCTGCTGAAATTGAAGTTTGATGGTCAGCAATTGATGAACCTCAACGCTGAGCAGCTGGCTGTGTTTGGTCTCGAGAAGCTTGTTGAGATCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATAAGGGTGAATATCGATCTCATTAAGATCAAACTCAAGCCCAAGGTGCATTGTGGGCTTAATCTTCCCTTGATTTCTCGTGGAAGAACGTTTCTACGCTTCCAGATTATCGGCTGCCATGTCGCTTATTGA

mRNA sequence

ATGTCAAGAACAAAGAAATGCATGATCATTTTCTTGATTATCATCTTAGTTTTAGTTCTTCTTTCGTTGTTAATCGTCTGGCTCATCACCATGGCTAACAAGATCAAATTCCATGTGATCGGCGCCGACCTGACCCAATTCAACTTCACGGACGACAACCAACTCCTGTTCGACCTGACCGTGAACATGAAAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACCGCATCGAAGTGACCTTGTTGTATCAAGACATAAAGTTTAGTAACGCGTCGATGTCACCTTTCTACCAAGGCCAAGATGGGTCGAAGCTGCTGAAATTGAAGTTTGATGGTCAGCAATTGATGAACCTCAACGCTGAGCAGCTGGCTGTGTTTGGTCTCGAGAAGCTTGTTGAGATCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATAAGGGTGAATATCGATCTCATTAAGATCAAACTCAAGCCCAAGGTGCATTGTGGGCTTAATCTTCCCTTGATTTCTCGTGGAAGAACGTTTCTACGCTTCCAGATTATCGGCTGCCATGTCGCTTATTGA

Coding sequence (CDS)

ATGTCAAGAACAAAGAAATGCATGATCATTTTCTTGATTATCATCTTAGTTTTAGTTCTTCTTTCGTTGTTAATCGTCTGGCTCATCACCATGGCTAACAAGATCAAATTCCATGTGATCGGCGCCGACCTGACCCAATTCAACTTCACGGACGACAACCAACTCCTGTTCGACCTGACCGTGAACATGAAAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACCGCATCGAAGTGACCTTGTTGTATCAAGACATAAAGTTTAGTAACGCGTCGATGTCACCTTTCTACCAAGGCCAAGATGGGTCGAAGCTGCTGAAATTGAAGTTTGATGGTCAGCAATTGATGAACCTCAACGCTGAGCAGCTGGCTGTGTTTGGTCTCGAGAAGCTTGTTGAGATCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATAAGGGTGAATATCGATCTCATTAAGATCAAACTCAAGCCCAAGGTGCATTGTGGGCTTAATCTTCCCTTGATTTCTCGTGGAAGAACGTTTCTACGCTTCCAGATTATCGGCTGCCATGTCGCTTATTGA

Protein sequence

MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY

Homology

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BLAST of CmaCh06G005130 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-22
Identity = 71/185 (38.38%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 9   IIFLIIILVLVLLSL--LIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVK 68
           +IF I+I + VLL +  LI+WLI   N IKFHV  A LT+F     N L ++L +N  ++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 69  NPNRAFGVFFDRIEVTLLYQDIKFS-NASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQL 128
           NPNR  GV++D IEV   Y D +F  + ++S FYQG   + ++  K  GQQL+ L+  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 129 AVFGLEKLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHCGLNLPLISRGRTFLRFQIIG 188
                +   +I+ +  +LRL+IR    LIK  + KPK+ C L +PL S   +   FQ   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 189 CHVAY 190
           C V +
Sbjct: 227 CDVDF 231

[Close]

BLAST of CmaCh06G005130 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.3e-21
Identity = 63/173 (36.42%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 8   MIIFLIIILVLVL-LSLLIVWLITMANKIKFHVIGADLTQFNFTD-DNQLLFDLTVNMKV 67
           + + +II L+++L ++ LI WLI     IKFHV  A LT+F+ T  DN L ++L + + V
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 68  KNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQL 127
           +NPN+  G+++DRIE    Y+  +FS  +++PFYQG   + +L   F GQ L+  NA Q 
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 128 AVFGLEKLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHC-GLNLPLISRGRT 177
                E++  ++ ++++ RL++R  +  +K  ++KPKV C  L LPL +   T
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGT 212

[Close]

BLAST of CmaCh06G005130 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.8e-19
Identity = 62/177 (35.03%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 12  LIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRA 71
           LI + V++ ++ LI+WLI   N +KF+V  A+L +F+F  +N L + L +N  ++NPN+ 
Sbjct: 59  LIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQR 118

Query: 72  FGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLE 131
            GV++D   V+  Y D +F +A++S FYQG   + ++  K +GQ L+ L          +
Sbjct: 119 VGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDD 178

Query: 132 KLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHC-GLNLPLISRGRT-FLRFQIIGC 186
           +   I+ +  +LRL +R     IK  KLKPK+ C  L +PL S   T   +FQ + C
Sbjct: 179 EKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

[Close]

BLAST of CmaCh06G005130 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-15
Identity = 42/140 (30.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 32  ANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFS 91
           +N +KF V  A+LT F+   +N L + L++N+ ++N   + G+ +DR E T+ Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 92  NASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVNI 151
              M  FY G   + LL+  F+GQ L+ L   +   F  ++   ++ + ++L +  RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

Query: 152 -DLIKIKLKPKVHCGLNLPL 171
             L+   +KP V C L +PL
Sbjct: 124 LHLVTWPMKPVVRCHLKIPL 143

[Close]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.6e-95
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF
Sbjct: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180

Query: 181 QIIGCHVAY 190
           QIIGCHVAY
Sbjct: 181 QIIGCHVAY 189

[Close]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL
Match: A0A6J1H1R7 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVI ADLTQFNFTDD QLLFDLT
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDLT 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           VNMKVKNPNRAFGVFFDRIEVT+LYQDIKFSNAS+SPFYQ QDGSKLLKLKFDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           NAEQLAVFGLEKLVE FTLKLELRLQIRVNIDLIKIKLKPKV CGLNLPLISRGRTFLRF
Sbjct: 121 NAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLRF 180

Query: 181 QIIGCHVAY 190
           QIIGCHVAY
Sbjct: 181 QIIGCHVAY 189

[Close]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62
Identity = 130/189 (68.78%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKK  IIF II++VL+L+SL I+WL+TM  K+KF V  A LT+FN T+ +QLLF L+
Sbjct: 1   MSRTKK-FIIFSIIVIVLILISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLS 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           +NM V+NPNR FGVFFD IEV +LYQDIKFSN S+SPFYQG++G  LL  +FDGQQLMNL
Sbjct: 61  LNMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           +AEQLAVF LEKLV+IF++K+ELRL +RV I  I+IKL PKV CGLNLPL+S GR+FLRF
Sbjct: 121 DAEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRF 180

Query: 181 QIIGCHVAY 190
           +IIGC VAY
Sbjct: 181 RIIGCFVAY 188

[Close]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.5e-56
Identity = 111/161 (68.94%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 29  ITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDI 88
           +TM  K+KF V  A LT+FN T+ +QLLF L++NM V+NPNR FGVFFD IEV +LYQDI
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 60

Query: 89  KFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIR 148
           KFSN S+SPFYQG++G  LL  +FDGQQLMNL+AEQLAVF LEKLV+IF++K+ELRL +R
Sbjct: 61  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 120

Query: 149 VNIDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY 190
           V I  I+IKL PKV CGLNLPL+S GR+FLRF+IIGC VAY
Sbjct: 121 VKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 161

[Close]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL
Match: A0A1S3B7X9 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 31  MANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKF 90
           M  K+KF V  A LT+FN T+ +QLLF L++NM V+NPNR FGVFFD IEV +LYQDIKF
Sbjct: 1   MTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDIKF 60

Query: 91  SNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVN 150
           SN S+SPFYQG++G  LL  +FDGQQLMNL+AEQLAVF LEKLV+IF++K+ELRL +RV 
Sbjct: 61  SNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMRVK 120

Query: 151 IDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY 190
           I  I+IKL PKV CGLNLPL+S GR+FLRF+IIGC VAY
Sbjct: 121 IGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 159

[Close]

BLAST of CmaCh06G005130 vs. NCBI nr
Match: XP_023005830.1 (NDR1/HIN1-like protein 3 [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF
Sbjct: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180

Query: 181 QIIGCHVAY 190
           QIIGCHVAY
Sbjct: 181 QIIGCHVAY 189

[Close]

BLAST of CmaCh06G005130 vs. NCBI nr
Match: XP_022957840.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 342.4 bits (877), Expect = 2.4e-90
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVI ADLTQFNFTDD QLLFDLT
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDLT 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           VNMKVKNPNRAFGVFFDRIEVT+LYQDIKFSNAS+SPFYQ QDGSKLLKLKFDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           NAEQLAVFGLEKLVE FTLKLELRLQIRVNIDLIKIKLKPKV CGLNLPLISRGRTFLRF
Sbjct: 121 NAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLRF 180

Query: 181 QIIGCHVAY 190
           QIIGCHVAY
Sbjct: 181 QIIGCHVAY 189

[Close]

BLAST of CmaCh06G005130 vs. NCBI nr
Match: KAG7028146.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.2 bits (835), Expect = 1.8e-85
Identity = 176/189 (93.12%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVI ADLTQFNFTDD QLLFDLT
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDLT 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           VNMKVKNPNRAFGVFFDRIEVT+LYQDIKFSNAS+SPFYQ QDGSKLLKLKFDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQDQDGSKLLKLKFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           NAEQLAVFGLEKLVE FTLKLEL     +NIDLIKIKLKPKV CGLNLPLISRGRTFLRF
Sbjct: 121 NAEQLAVFGLEKLVETFTLKLEL-----LNIDLIKIKLKPKVRCGLNLPLISRGRTFLRF 180

Query: 181 QIIGCHVAY 190
           QIIGCHVAY
Sbjct: 181 QIIGCHVAY 184

[Close]

BLAST of CmaCh06G005130 vs. NCBI nr
Match: KAG6596607.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 31  MANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKF 90
           MANKIKFHVI ADLTQFNFTDD QLLFDLTVNMKVKNPNRAFGVFFDRIEVT+LYQDIKF
Sbjct: 1   MANKIKFHVIDADLTQFNFTDDKQLLFDLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIKF 60

Query: 91  SNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVN 150
           SNAS+SPFYQ QDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVE FTLKLELRLQIRVN
Sbjct: 61  SNASLSPFYQDQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELRLQIRVN 120

Query: 151 IDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY 190
           IDLIKIKLKPKV CGLNLPLISRGRTFLRFQIIGCHVAY
Sbjct: 121 IDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 159

[Close]

BLAST of CmaCh06G005130 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 9.3e-66
Identity = 137/189 (72.49%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60
           MSRTKK  IIF III+VLVL+SL I+WLIT  +K+KF V  A+LTQFNFTDD+QLLF L+
Sbjct: 1   MSRTKK-FIIFTIIIIVLVLISLFILWLITKTHKLKFQVTNANLTQFNFTDDSQLLFQLS 60

Query: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120
           +NM VKNPNR FGVFFD IEV +LYQDIKFSN S+SPFYQGQ+G  LL L FDGQQLMNL
Sbjct: 61  LNMTVKNPNRGFGVFFDSIEVVVLYQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQLMNL 120

Query: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180
           +A+QLAVF LEKL++IF++KLELRL++RV I  I+IKL PKV CGLNLPLIS GR+F+RF
Sbjct: 121 DAQQLAVFTLEKLLDIFSIKLELRLRMRVKIGFIRIKLNPKVRCGLNLPLISHGRSFIRF 180

Query: 181 QIIGCHVAY 190
           +II C+VAY
Sbjct: 181 RIIDCYVAY 188

[Close]

BLAST of CmaCh06G005130 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 71/185 (38.38%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 9   IIFLIIILVLVLLSL--LIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVK 68
           +IF I+I + VLL +  LI+WLI   N IKFHV  A LT+F     N L ++L +N  ++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 69  NPNRAFGVFFDRIEVTLLYQDIKFS-NASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQL 128
           NPNR  GV++D IEV   Y D +F  + ++S FYQG   + ++  K  GQQL+ L+  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 129 AVFGLEKLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHCGLNLPLISRGRTFLRFQIIG 188
                +   +I+ +  +LRL+IR    LIK  + KPK+ C L +PL S   +   FQ   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 189 CHVAY 190
           C V +
Sbjct: 227 CDVDF 231

[Close]

BLAST of CmaCh06G005130 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-22
Identity = 63/173 (36.42%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 8   MIIFLIIILVLVL-LSLLIVWLITMANKIKFHVIGADLTQFNFTD-DNQLLFDLTVNMKV 67
           + + +II L+++L ++ LI WLI     IKFHV  A LT+F+ T  DN L ++L + + V
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 68  KNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQL 127
           +NPN+  G+++DRIE    Y+  +FS  +++PFYQG   + +L   F GQ L+  NA Q 
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 128 AVFGLEKLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHC-GLNLPLISRGRT 177
                E++  ++ ++++ RL++R  +  +K  ++KPKV C  L LPL +   T
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGT 212

[Close]

BLAST of CmaCh06G005130 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-20
Identity = 62/177 (35.03%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 12  LIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRA 71
           LI + V++ ++ LI+WLI   N +KF+V  A+L +F+F  +N L + L +N  ++NPN+ 
Sbjct: 59  LIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQR 118

Query: 72  FGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLE 131
            GV++D   V+  Y D +F +A++S FYQG   + ++  K +GQ L+ L          +
Sbjct: 119 VGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDD 178

Query: 132 KLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHC-GLNLPLISRGRT-FLRFQIIGC 186
           +   I+ +  +LRL +R     IK  KLKPK+ C  L +PL S   T   +FQ + C
Sbjct: 179 EKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

[Close]

BLAST of CmaCh06G005130 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 59/188 (31.38%), Postives = 105/188 (55.85%), Query Frame = 0


Query: 7   CMIIFLIIILVLVLLSL----LIVWLITMANKIKFHVIGADLTQFNFTD-DNQLLFDLTV 66
           C++  +  IL+ VL+ L    LI+W I   N +KF V  ADLT+F F    + L +++++
Sbjct: 49  CLVNIICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISL 108

Query: 67  NMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLN 126
           N  ++NPN+  G+ +D++EV   Y D +FS A+M+ FYQG   + ++  + +GQ+L+ L 
Sbjct: 109 NFSIRNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLG 168

Query: 127 AEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKI-KLKPKVHCGLNLPL-ISRGRTFLR 186
           A     F  ++   ++ + ++LR ++R     +    ++PK+ C L +PL  S      +
Sbjct: 169 AGGRRDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQ 228

Query: 187 FQIIGCHV 188
           F    CHV
Sbjct: 229 FHPTKCHV 236

[Close]

BLAST of CmaCh06G005130 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 42/140 (30.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 32  ANKIKFHVIGADLTQFNFTDDNQLLFDLTVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFS 91
           +N +KF V  A+LT F+   +N L + L++N+ ++N   + G+ +DR E T+ Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 92  NASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELRLQIRVNI 151
              M  FY G   + LL+  F+GQ L+ L   +   F  ++   ++ + ++L +  RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

Query: 152 -DLIKIKLKPKVHCGLNLPL 171
             L+   +KP V C L +PL
Sbjct: 124 LHLVTWPMKPVVRCHLKIPL 143

The following BLAST results are available for this feature:

BLAST of CmaCh06G005130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNH6	2.3e-22	38.38	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	7.3e-21	36.42	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	6.8e-19	35.03	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	2.7e-15	30.00	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]

BLAST of CmaCh06G005130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYH7	4.6e-95	100.00	NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1	[more]
A0A6J1H1R7	1.2e-90	96.30	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1	[more]
A0A5D3DNY5	1.4e-62	68.78	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TKH6	5.5e-56	68.94	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3B7X9	1.6e-55	69.18	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1	[more]

BLAST of CmaCh06G005130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005830.1	9.6e-95	100.00	NDR1/HIN1-like protein 3 [Cucurbita maxima]	[more]
XP_022957840.1	2.4e-90	96.30	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
KAG7028146.1	1.8e-85	93.12	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596607.1	1.1e-77	95.60	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038904446.1	9.3e-66	72.49	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]

BLAST of CmaCh06G005130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06320.1	1.6e-23	38.38	NDR1/HIN1-like 3	[more]
AT2G35980.1	5.2e-22	36.42	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	4.8e-20	35.03	NDR1/HIN1-like 2	[more]
AT2G35460.1	1.7e-17	31.38	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	1.9e-16	30.00	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 63..164 e-value: 1.4E-11 score: 44.8
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 8..186
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 15..97
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 8..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G005130.1	CmaCh06G005130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane