CmaCh06G005030 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G005030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	Cma_Chr06: 2362483 .. 2362845 (+)
RNA-Seq Expression	CmaCh06G005030
Synteny	CmaCh06G005030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGCCACATTCACTGATGTCGTCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTATCGTTGGAGCTAAACCAAGACGATGGTACCGCACTCAGATACTCTAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCATCCACGGCCGTCGCCCGGAAGATCTAG

mRNA sequence

ATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGCCACATTCACTGATGTCGTCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTATCGTTGGAGCTAAACCAAGACGATGGTACCGCACTCAGATACTCTAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCATCCACGGCCGTCGCCCGGAAGATCTAG

Coding sequence (CDS)

ATGAGCAGAAGAAGCAATGGAAGTGTTCCAAAGCTTGAATTGAAGCTGAACCTGTCACCACCACGGCCACATTCACTGATGTCGTCACCAAGCCGATCGGCGACAGTGTCACCCACATCGCCACCAAGCTCTTGCGTATCGTTGGAGCTAAACCAAGACGATGGTACCGCACTCAGATACTCTAGCAGTCCGGAAGCCACCTCAATGGTGCTGGTGGGGTGCCCTCGCTGTCTTATGTACGTAATGCTGTCGGAGAATGACCCCAAATGCCCGAAATGCAAAAGCTCTGTTTTGCTGGATTTTCTCCATGATGGCGGCGCCACCGCACCTCCGCCATCCACGGCCGTCGCCCGGAAGATCTAG

Protein sequence

MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI

Homology

[Close]

BLAST of CmaCh06G005030 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.7e-36
Identity = 82/119 (68.91%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPP--RPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTAL 60
           MSRRS    PKLELKLNLSPP      ++ SPSRSAT SPTSPPSSCVS E+NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 61  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVA 118
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+    A   + A +
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of CmaCh06G005030 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 66/119 (55.46%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRR N + PKLEL+LNLSPP   +   S  RS   S T+ PSSCVS E NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL +    A   + A  R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of CmaCh06G005030 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 12  LELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVL 71
           L+LKLN+SP    SL++  S S+  S  +                        EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCSEEAE-------------------GGGGEAKSMVV 70

Query: 72  VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 103
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL
Match: A0A6J1KYB2 (uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.9e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL
Match: A0A6J1H2T2 (uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC111459550 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPP+ HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPRPH L+SSPSRSATVSPTSPPSSCVS ELNQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+A PPST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASA-PPSTTAARK 120

[Close]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPRPH L+SSPSRSATVSPTSPPSSCVS ELNQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+A PPST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASA-PPSTTAARK 120

[Close]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-50
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTA-LR 60
           MSRRS+GSVPKLELKLNLSPPRPH L+SSPSRSATVSPTSPPSSCVS ELNQDDG A LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+A PPST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASA-PPSTTAARK 120

[Close]

BLAST of CmaCh06G005030 vs. NCBI nr
Match: XP_023005134.1 (uncharacterized protein LOC111498264 [Cucurbita maxima])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. NCBI nr
Match: XP_023539011.1 (uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. NCBI nr
Match: XP_022958318.1 (uncharacterized protein LOC111459550 [Cucurbita moschata])

HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPP+ HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPQSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. NCBI nr
Match: KAG6596596.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028133.1 hypothetical protein SDJN02_09313, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRRSNGSVPKLELKLNLSPPR HSLMSSPSRSATVSPTSPPSSCVSLELNQDDGT LRY
Sbjct: 1   MSRRSNGSVPKLELKLNLSPPRSHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTTLRY 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARKI 120
           SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATA PPSTAVARKI
Sbjct: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATASPPSTAVARKI 120

[Close]

BLAST of CmaCh06G005030 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 109/121 (90.08%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDD-GTALR 60
           MSRRS+GSVPKLELKLNLSPPRPH L+SSPSRSATVSPTSPPSSCVS ELNQDD G ALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
           YSSSPEATSMVLVGCPRCLMYVMLSEN+PKCPKCKSSVLLDFLHDG A+A PPST  ARK
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASA-PPSTTAARK 120

[Close]

BLAST of CmaCh06G005030 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 6.2e-37
Identity = 82/119 (68.91%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPP--RPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTAL 60
           MSRRS    PKLELKLNLSPP      ++ SPSRSAT SPTSPPSSCVS E+NQD+  ++
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE-PSV 60

Query: 61  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVA 118
           RYS+SPE TSMVLVGCPRCLMYVMLSE+DPKCPKCKS+VLLDFLH+    A   + A +
Sbjct: 61  RYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 114

[Close]

BLAST of CmaCh06G005030 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 8.3e-26
Identity = 66/119 (55.46%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 1   MSRRSNGSVPKLELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRY 60
           MSRR N + PKLEL+LNLSPP   +   S  RS   S T+ PSSCVS E NQ++   +  
Sbjct: 1   MSRR-NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEENETI-- 60

Query: 61  SSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLLDFLHDGGATAPPPSTAVARK 120
                 TSMVLVGCPRCLMYVMLS++DPKCPKCKS+VLLDFL +    A   + A  R+
Sbjct: 61  ------TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTRR 110

[Close]

BLAST of CmaCh06G005030 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 12  LELKLNLSPPRPHSLMSSPSRSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVL 71
           L+LKLN+SP    SL++  S S+  S  +                        EA SMV+
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCSEEAE-------------------GGGGEAKSMVV 70

Query: 72  VGCPRCLMYVMLS-ENDPKCPKCKSSVLLDFL 103
           VGCP C+MY++ S ENDP+CP+C S VLLDFL
Sbjct: 71  VGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of CmaCh06G005030 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 12  LELKL---NLSPPRPHSLMS-SPSRSATVSPTSPPSSCVSLELN------------QDDG 71
           LELKL   ++S P P  L S SP++S +   +      V L L             +DDG
Sbjct: 142 LELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKVKLALERAEKDTKKRQSPEDDG 201

Query: 72  TALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSSVLL 100
                +S+  A S V  GCP CL YV +++N+PKCP+C S V L
Sbjct: 202 VYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPL 245

[Close]

BLAST of CmaCh06G005030 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-06
Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 32  RSATVSPTSPPSSCVSLELNQDDGTALRYSSSPEATSMVLVGCPRCLMYVMLSENDPKCP 91
           RS +   +S  +SC++      +  A  +    EA  MV++GC  C+MYVM+ +   +CP
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 92  KCKSSVLLDF 102
           KCK + L+ F
Sbjct: 90  KCKCTDLIFF 99

The following BLAST results are available for this feature:

BLAST of CmaCh06G005030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	8.7e-36	68.91	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	1.2e-24	55.46	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	3.7e-10	42.39	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmaCh06G005030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYB2	8.9e-60	100.00	uncharacterized protein LOC111498264 OS=Cucurbita maxima OX=3661 GN=LOC111498264...	[more]
A0A6J1H2T2	2.2e-58	98.33	uncharacterized protein LOC111459550 OS=Cucurbita moschata OX=3662 GN=LOC1114595...	[more]
A0A5A7TLW3	7.6e-51	90.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	7.6e-51	90.08	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A0A0LBI1	1.3e-50	90.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]

BLAST of CmaCh06G005030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005134.1	1.8e-59	100.00	uncharacterized protein LOC111498264 [Cucurbita maxima]	[more]
XP_023539011.1	1.6e-58	99.17	uncharacterized protein LOC111799770 [Cucurbita pepo subsp. pepo]	[more]
XP_022958318.1	4.5e-58	98.33	uncharacterized protein LOC111459550 [Cucurbita moschata]	[more]
KAG6596596.1	3.8e-57	97.50	Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ...	[more]
XP_008442891.1	1.6e-50	90.08	PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 unc...	[more]

BLAST of CmaCh06G005030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	6.2e-37	68.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	8.3e-26	55.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	2.6e-11	42.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16500.1	1.9e-06	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	3.3e-06	34.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR33177:SF47	BNAC02G02040D PROTEIN	coord: 3..115
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 3..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G005030.1	CmaCh06G005030.1	mRNA