CmaCh06G004390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	histone deacetylase HDT1-like
Location	Cma_Chr06: 2028401 .. 2031932 (-)
RNA-Seq Expression	CmaCh06G004390
Synteny	CmaCh06G004390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCGTTGAGATAAAAAGGGAAAACAAAAATAAAAACAAAAACCCTACCTGCAACTTCCCATTGATCTCTGTTCTTCTCCAATGGAGTTTTGGGGTAATTTCCTCTCTTCCCTTTTCTCCTTTGCTTCTTCATTGATTTCTTCTTCTCCTCTGCGCTTCTTCTTAATTGGCTAAGATCAACGAGTTTTATTTCATTTTTTGTAGTGATTTAGGTATTATGACTGTAGAAAAATAGTTGAAGAGTACATTTAGCTTAAGGAGTTGTTTTTGTTTTTGTTTATATTCTTCCTTGGAAGCTTCTGGGTTTAGGCTACCTGTTTATGCACTGGAATTTTGCTATTTTTTTAATTTTCAATGCTATCTTGGGAATAATTTGATTTGAACCGCTATTTTGTTTTATTAAGTTCGTCACTGTTGGAATTTGTGTGTATATGACGTGAATTTGAGTGTTAAGAGACTGAAGGCAAAAGGCGCTTGAACGATTTTGGACTCGCTTCTCTTTTCCGGAGATGTGATTATGGATATGGTTTGTTTGAAATTTGATGTGCATTGTTGATTTACATCGGTTCTGTTTAACGAGATAGGATTGCTTCATCTCAGTCTTTACGTTTTTGCTCTTTCTGGTTGTTTTATTTTCTTGTTTATGTGCGGCCTTTTTAGTTAGCTCCCTTCTTTTGGCTAATTAATGAGTTCCTACTTATTCATAGTGCGTAGAAGTTTTTTGAACTTATAGTTTAGGAAAACATTAATTGGAGCTGCTATTGCTGGATGATTCCAAATTTTCAACATTTATTTGTAATTTATTGTCGCTAGTATCTATCTGGCTGGTGATGAAAGATCAAGATAACAGTTTCTGCTGGAAATGGAGAGTGGTTTTATATGTCATGTGCCTATTATTTCTTGGTGGATATGCTGGAGTTACTACAGATTCTCAGTTCTCTTACACATCGATGTACCTAACTAAAAGCACATTGGTATATGCATATTCAGTTCTGTGCTGGCTCTATGTGTTTCCATGACTCAGTGCTATTGATATGTCGTGCAGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGTATCGTCTTTGAGCTAGTTTGTTTATATGTTGATGAGAAATCAGTTGGGCATTTGTTGAGTTATATAATTTCCGCAGGCATGCCTTGGAGAGTCCAAGAACAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTATCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCCGAGTTCCTAAATAATTTTAGTTTTTTTTAATTCAACATTTAATTTAATTTTTTTAATTTTCATTAAAAAAAGTTATGTAGTTTAATTGTTTACTTCGCACTTTCTTGTGTTTTTTCCTTGACTAGTTTGAGTTTTTCTCATTGCCACGGAGGAATCTTGTAAGTTATCTCTCATAAAAGGCATTGTAACTTTATTTTTATTTCATTAAAATCAATGAATAAGCACTGGTTTGGTGTTTTCTTTTCCATTTCAGATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGTAATGTGTACTTTCTGATACTGGTTTGTGTATTTGTCATTTATATTTAATTATTTATGCTCTAATACTTTGGTTGCAGGAAAACCAGAGCCACAGCCACAGCCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACATTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGATGAGGTGCACTGTCATTTTACTTCTTAGTGGGAATTTATTTAAAAAAAAAAAAGATTCATGATAAACAGGGTACAAAATTAATTAATTTAGCTCTCATTTTCATTCCATGTGAAACTCGAGAATGTTCCAGGAAGATAGGTTTTCAAATCATTGATTAAAAGAATTTTGGCTATTCTGAAACAGTTTTAATATTTCCTTATTATTTCACTTGCGGCTAATCCGCCCCGCTTCAATTTATCCAGTATTTGATTACCTTATCATGTGCAAATCTTTCAATCTTTGTCTTGTACAATGGTCATACCCGATGGAGCATTGTTTCTTCCTGAGCTACTTAGATATTTGCTATTGTCTGAGGCATATAAGGAAGTTGGTATCTTAGGATTTACTCTACAAATATGTCCACTTTTTTAAACAAGAAATGAAAAGAGTAATACTCAAAAATACAAATTCCATAAATGAACGAAACAGAATCACAAAGGAAAAGTAAAAGCATCACAAAAGATTCGAAAAGAGAACATCGAGAAGAAGACTTCTGGATTTTCAAATGGATACTAATATGGCCATTTAATTTCAACTTTCTTTATCATCTGTCCTGGTTTTCTTCAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGCGACGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGTTCAAGCCTGCTATCTTTCTCTAATTCTTAGAGAATCTTGATTGCTTCGAGCTAGGCATTCTTTTCTTTTATTTGCTATTTTTTTCAACCAAATAATTGTTGGACCCATTGAAGGCTGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAACGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGGTTTGTTTCTTCTGACCTTTATGAACATGTTTTACATTCTGATTTCTTAGCCATTATATTGCTATATATGTGTTGTTGACCACTCGATCTTACCATATTCGTTTTCCTTTGGAATTCATGTTATTGCATTGAAATTTCATGATTGTTCATTTTTTTTATACTTAATTTAATGTTATTTTTTACGACAGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTCCTGCTAGTGACCAAAATAAACAGCAGATTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAATCTTGCAAGAGGTATCTCTTGCTACACGTGTTTTTCTAATTGCTTGGAGAATTAAATGGTTAGACTTTAGTCTAACTGTGGCAACAAACTTTACTGCAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTACTGAGAAGTGACCAGGTTAATATTTCAGGAAGAACGTGTTGGATTTGCTCAACCTGGCCAGTACGTTAGATCCGAACCACGATACTGGCTGGTTTTGAATTTTCTACCCCTCAACCCTTTCGAGGTTCATCTTCTAAATGTTCTGATGTGA

mRNA sequence

CTTCGTTGAGATAAAAAGGGAAAACAAAAATAAAAACAAAAACCCTACCTGCAACTTCCCATTGATCTCTGTTCTTCTCCAATGGAGTTTTGGGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGCATGCCTTGGAGAGTCCAAGAACAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTATCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCCGAGTTCCTAAATAATTTTATTTTTCTCATTGCCACGGAGGAATCTTATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGAAAACCAGAGCCACAGCCACAGCCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACATTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGATGAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGCGACGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGCTGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAACGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTCCTGCTAGTGACCAAAATAAACAGCAGATTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAATCTTGCAAGAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTACTGAGAAATCCGAACCACGATACTGGCTGGTTTTGAATTTTCTACCCCTCAACCCTTTCGAGGTTCATCTTCTAAATGTTCTGATGTGA

Coding sequence (CDS)

ATGGAGTTTTGGGGTGCTGAGGTTAAAGCTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAATATATTGCATCTGTCGCAGGCATGCCTTGGAGAGTCCAAGAACAAAGGAAGTGAACAGGTTTTTCTGTATGTCAAGGTCGGCAATCAAAAGCTTGTTCTGGGGACATTATCCTCAGAGAAATTCCCACAAGTATCTTTTGATCTGGTGTTTGACAAAGACTTTGAGCTATCTCATAATTGGAAAAATGGAAGCGTCCACTTTACGGGATATTTATCCCTCCTTCCAGAAGAATATCCTTTCTCCGAGTTCCTAAATAATTTTATTTTTCTCATTGCCACGGAGGAATCTTATACTGATTCTGAAGAGGATCTTCCACAAGCTGTCATTGACAATGGAAAACCAGAGCCACAGCCACAGCCACAGCCTAAGAAAGATGAAAAGCCTGGTACTTCTGGAACGAAGAAAAAAGTGCAGATTGTAGAACCAAACAAAGGTGGCTCTATTGACACTAAGAAGAATGAAGACATTTCTGACGAAGATGATGATGAGGATGAAGACAGCTCGGATGATGAGAATGCAAATGGAGGTGAAGAAGACGACAGTGATGATGAAAATGAATTTTCTGGCGACGACAGTGATGATGACGATGAAAATGAAGACTTGGATGACAGTATGGAAGAGGATGAGCAGACACCAAAAAAGGCTGAAGCAAGCAAGAAGAGGCCTTTAGAGGCTGCTAATAAAACGCCTGCTCCTGATAAGAAGACAAAACTCGTCACTCCCCAGAAAACTGATGGCAAGAAAGGCGTTCCTCATGTAGCTACTCCTCATCCTTCAAAACAGGCTGGGAAAATGCCTCCTGCTAGTGACCAAAATAAACAGCAGATTCCCAAATCAGCTAGTGGTGCATTCCCCTGCAAATCTTGCAAGAGGGCATTTGGCTCAGAAACTGCGTTACAATCCCACACAAAGGCTAAGCACAGTACTGAGAAATCCGAACCACGATACTGGCTGGTTTTGAATTTTCTACCCCTCAACCCTTTCGAGGTTCATCTTCTAAATGTTCTGATGTGA

Protein sequence

MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYTDSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASGAFPCKSCKRAFGSETALQSHTKAKHSTEKSEPRYWLVLNFLPLNPFEVHLLNVLM

Homology

[Close]

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.2e-62
Identity = 160/333 (48.05%), Postives = 198/333 (59.46%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK+GEPL V PG+  +LHLSQA LGE K   SE V L V +  +KLVLGTL+S
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EK PQ  FDLVFD+DFELSHN K+GSV+F GY +  P E    +           E+ Y 
Sbjct: 61  EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDD-----------EDDYD 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           +S+ED+P  + ++GKPE  P+   K +    ++  K+KV+IVEP K              
Sbjct: 121 ESDEDIPLTLANSGKPE--PKEAGKSNAGKDSASGKQKVRIVEPTK-------------- 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
             DDEDE S DD++  G +EDDSDD                        +E+TPKKAE +
Sbjct: 181 --DDEDESSDDDDSDMGEDEDDSDD-----------------------SEEETPKKAEPA 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           K+R  ++A KTP  DKK KL TPQKTDGKKG  HVATPHPSKQA K P            
Sbjct: 241 KRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP------------ 269

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
            ++G+  CK C R+FGSE AL SH+KAKHS  K
Sbjct: 301 KSAGSHHCKPCNRSFGSEGALDSHSKAKHSAGK 269

[Close]

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot
Match: Q9LZR5 (Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-48
Identity = 149/335 (44.48%), Postives = 194/335 (57.91%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG + ++H+SQ  LGESKN  +E + LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQ+S ++V +++F LSH WKNGSV F+GY                            
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSVFFSGY--------------------------KV 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           D+ +  P+ +ID+       +  PK           K+V    PN+    D K  +D  D
Sbjct: 121 DASDPEPEDLIDDQLEAAGFKAAPK--------SAAKQVNFQLPNE----DVKAKQD-DD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
            D  E++ S DD++ N G+E   ++E   +  DS++DD ++D +D   E E+TPKK E  
Sbjct: 181 ADGSEEDSSDDDDSENSGDE---EEEKVTAESDSEEDDSSDDEEDDSSE-EETPKKPEEP 240

Query: 241 KKRPLEA-ANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKM----PPASDQNK 300
           KKR  E  ++K PA +KK K VTPQKTD KK   HVATPHPSKQAGK            +
Sbjct: 241 KKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQ 291

Query: 301 QQIPKSASGAFPCKSCKRAFGSETALQSHTKAKHS 331
           QQ PKSA GAF CKSC R F SE  LQSHTKAKHS
Sbjct: 301 QQTPKSA-GAFGCKSCTRTFTSEMGLQSHTKAKHS 291

[Close]

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.6e-48
Identity = 149/336 (44.35%), Postives = 197/336 (58.63%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   ILH+SQA LGESK   S+   +YVKV ++KL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK--SDSALMYVKVDDKKLAIGTLSI 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           +K+PQ+ FDLVF+K+FELSH  K  SV F+GY    P E    +                
Sbjct: 61  DKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDL------------DSE 120

Query: 121 DSEEDLPQAVI-DNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDIS 180
           D EE+L   VI +NGK + +   + +K+++   + T  K  +        ++ K  +D  
Sbjct: 121 DEEEELNIPVIKENGKADGK---EEQKNQEKAVAATASKSSL-------GLEKKSKDDSD 180

Query: 181 DEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENE-DLDDSMEEDEQTPKKAE 240
           D D+DE +DS +D++      DDSD+    S D+ DDD  +E D  D  EE+  TPKK E
Sbjct: 181 DSDEDESDDSDEDDS------DDSDEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPE 240

Query: 241 ASKKRPLEAANKTPAPDKKTKLVTP--QKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQ 300
           A KKR  E A KTP  DKK K+ TP  QKT GKKG  HVATPHP+K  GK P  +D+  +
Sbjct: 241 AGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTE 300

Query: 301 QIPKSASGAFPCKSCKRAFGSETALQSHTKAKHSTE 333
           + PKS  G+ PCKSC + F SE ALQ+H+KAKH  +
Sbjct: 301 KSPKS-GGSVPCKSCSKTFNSEMALQAHSKAKHGAK 303

[Close]

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-43
Identity = 152/342 (44.44%), Postives = 194/342 (56.73%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   +LHLSQA LGESK   S+   +YVK+ +QKL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSV 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           +K P + FDL+FDK+FELSH  K  SV FTGY      E PF E           +E   
Sbjct: 61  DKNPHIQFDLIFDKEFELSHTSKTTSVFFTGY----KVEQPFEE-----------DEMDL 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSE++      D     P  +   K DEK   S  K    +  P+K  S D+KK++D  D
Sbjct: 121 DSEDE------DEELNVPVVKENGKADEKKQKSQEK---AVAAPSK-SSPDSKKSKDDDD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
            D+DE +DS +DE        D  DE   S +  DD  + +D  D  EED  TPKK E  
Sbjct: 181 SDEDETDDSDEDET-------DDSDEGLSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVG 240

Query: 241 KKRPLEAA-NKTPAPDKKTKLVTP--QKTDGKKGVP-HVATPHPSKQAGKMPPASDQNKQ 300
           KKRP E++  KTP  DKK K+ TP  QKT GKKG   HVATPHP+K  GK    +D++ +
Sbjct: 241 KKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVK 300

Query: 301 QIPKSA---SGAFPCKSCKRAFGSETALQSHTKAKHSTEKSE 336
             PKSA    G+ PCK C ++F SETALQ+H++AK    +S+
Sbjct: 301 S-PKSAPKSGGSVPCKPCSKSFISETALQAHSRAKMGASESQ 305

[Close]

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-42
Identity = 151/335 (45.07%), Postives = 192/335 (57.31%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   +LHLSQA LGESK   S+   +YVK+ +QKL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSV 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           +K P + FDL+FDK+FELSH  K  SV FTGY      E PF E           +E   
Sbjct: 61  DKNPHIQFDLIFDKEFELSHTSKTTSVFFTGY----KVEQPFEE-----------DEMDL 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSE++      D     P  +   K DEK   S  K    +  P+K  S D+KK++D   
Sbjct: 121 DSEDE------DEELNVPAVKENGKADEKKQKSQEK---AVAAPSK-SSPDSKKSKD--- 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENE-FSGDDSDDDDENE-DLDDSMEEDEQTPKKAE 240
            DDD DED +DD      +ED++DD +E  S ++ DDD  +E D  D  EED  TPKK E
Sbjct: 181 -DDDSDEDETDD-----SDEDETDDSDEGLSPEEGDDDSSDEDDTSDDEEEDTPTPKKPE 240

Query: 241 ASKKRPLEAA-NKTPAPDKKTKLVTP--QKTDGKKGVP-HVATPHPSKQAGKMPPASDQN 300
             KKR  E++  KTP  DKK K+ TP  QKT GKKG   HVATPHP+K  GK    +D++
Sbjct: 241 VGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKS 297

Query: 301 KQQIPKSASGAFPCKSCKRAFGSETALQSHTKAKH 330
            +    +     PCKSC ++F SETA Q+H+KAKH
Sbjct: 301 VKSPKSAPKSGVPCKSCSKSFISETAPQAHSKAKH 297

[Close]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL
Match: A0A6J1KU46 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 3.2e-161
Identity = 317/333 (95.20%), Postives = 317/333 (95.20%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYT
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
           EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK
Sbjct: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 317

[Close]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL
Match: A0A6J1G3S8 (histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.1e-156
Identity = 309/333 (92.79%), Postives = 312/333 (93.69%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYT
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN D SD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
           EDDD++EDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDDNEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PK
Sbjct: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 300

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           SASGAFPCKSCKRAFGSETALQSHTKAKHS EK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL
Match: A0A6J1CUC4 (histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.9e-126
Identity = 269/337 (79.82%), Postives = 283/337 (83.98%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGES+ KGSE VFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDK+FELSHNWKNGSV+FTGY SLLPEE                E SYT
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEE---------------EESSYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGS---IDTKKNED 180
           DSEED+P A +DNGKPE     QPKKD KP  SG+K+KVQIVEPNK GS   ID+KKN+D
Sbjct: 121 DSEEDIPVAAVDNGKPE----AQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDD 180

Query: 181 ISDEDDDEDEDSSDDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKK 240
            SDEDDDEDEDS DDENANGGEEDD+ DDENEFSGDDSD  D NE+ DDS+ EDEQTPKK
Sbjct: 181 TSDEDDDEDEDSLDDENANGGEEDDTDDDENEFSGDDSDKTD-NEESDDSLAEDEQTPKK 240

Query: 241 AEASKKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQ 300
           AEASKKRPLE+ANKTPA DKK KLVTPQKTDGKK V HVATPHPSKQAGK P A+DQNKQ
Sbjct: 241 AEASKKRPLESANKTPAADKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQ 300

Query: 301 QIPKSASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           Q PKSA GAFPCKSCKRAFGSE ALQSHTKAKHS EK
Sbjct: 301 QTPKSAGGAFPCKSCKRAFGSEGALQSHTKAKHSAEK 317

[Close]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL
Match: A0A1S3B626 (histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.6e-125
Identity = 264/337 (78.34%), Postives = 284/337 (84.27%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEE                E +YT
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEE---------------EESTYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNED 180
           DSEED P AV DNGKPE    P+PKKD KP TSGTKKKVQIVEPNK     +ID+KKNED
Sbjct: 121 DSEEDFPLAVTDNGKPE----PEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNED 180

Query: 181 ISDEDDDEDEDSSDDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKK 240
            SDEDDDEDE+S+DDEN NGGEEDD+ DDENE SG DS+D D  ED DDS+EEDEQTPKK
Sbjct: 181 SSDEDDDEDEESTDDENENGGEEDDTDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKK 240

Query: 241 AEASKKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQ 300
           AEASKKRPL++ANKTPAPDKK KLVTPQKTDGKKGV HV TPHPSK+AGKMP A+D+ KQ
Sbjct: 241 AEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQ 300

Query: 301 QIPKSASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           Q PKSA+ AFPCK+C R FGSETALQSHTKAKH+ +K
Sbjct: 301 QTPKSANAAFPCKTCNRTFGSETALQSHTKAKHTADK 316

[Close]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL
Match: A0A0A0LEE5 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 3.4e-123
Identity = 261/337 (77.45%), Postives = 284/337 (84.27%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGESK+KGSE V LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEE                E +YT
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEE---------------EESTYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNED 180
           DSEED P AV DNGKPE  P+P+PKKD KP TSGTKKKVQIVEP+K     +ID+KKN+D
Sbjct: 121 DSEEDFPLAVTDNGKPE--PEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKD 180

Query: 181 ISDEDDDEDEDSSDDENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKK 240
            SDEDDDEDE+S+D+EN NGGEEDDS DDENE SG DS+D D  ED DDS+EEDEQTPKK
Sbjct: 181 SSDEDDDEDEESTDNENENGGEEDDSDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKK 240

Query: 241 AEASKKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQ 300
           AEASKKRPL++ANKTPAPDKK KLVTPQKTDGKKGV HVATPHPSK+AGKM  A+D+NKQ
Sbjct: 241 AEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQ 300

Query: 301 QIPKSASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           Q PKSA+ AF CK+C R FGSETALQSHTKAKH+ +K
Sbjct: 301 QTPKSANAAFSCKTCNRTFGSETALQSHTKAKHTADK 318

[Close]

BLAST of CmaCh06G004390 vs. NCBI nr
Match: XP_023005787.1 (histone deacetylase HDT1-like [Cucurbita maxima])

HSP 1 Score: 577.8 bits (1488), Expect = 6.5e-161
Identity = 317/333 (95.20%), Postives = 317/333 (95.20%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYT
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
           EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK
Sbjct: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 317

[Close]

BLAST of CmaCh06G004390 vs. NCBI nr
Match: KAG7028070.1 (Histone deacetylase HDT3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.3 bits (1466), Expect = 2.3e-158
Identity = 313/329 (95.14%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64
           GAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 23  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 82

Query: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYTDSEE 124
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNF          TDSEE
Sbjct: 83  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNF---------NTDSEE 142

Query: 125 DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISDEDDD 184
           DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNED SDEDDD
Sbjct: 143 DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDD 202

Query: 185 EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP 244
           EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP
Sbjct: 203 EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP 262

Query: 245 LEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASG 304
           LEAANK PAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PKSASG
Sbjct: 263 LEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASG 322

Query: 305 AFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           AFPCKSCKRAFGSETALQSHTKAKHS EK
Sbjct: 323 AFPCKSCKRAFGSETALQSHTKAKHSAEK 342

[Close]

BLAST of CmaCh06G004390 vs. NCBI nr
Match: XP_023540314.1 (histone deacetylase HDT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 562.4 bits (1448), Expect = 2.8e-156
Identity = 310/333 (93.09%), Postives = 311/333 (93.39%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYT
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN D SD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
           EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           KKRPLEAANK PAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PK
Sbjct: 241 KKRPLEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 300

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           SASGAFPCKSCKRAFGSETALQSHTKAKHS EK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of CmaCh06G004390 vs. NCBI nr
Match: XP_022946410.1 (histone deacetylase HDT1 [Cucurbita moschata])

HSP 1 Score: 561.2 bits (1445), Expect = 6.3e-156
Identity = 309/333 (92.79%), Postives = 312/333 (93.69%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYT
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYT 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKN D SD
Sbjct: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNADSSD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
           EDDD++EDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS
Sbjct: 181 EDDDDNEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240

Query: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPK 300
           KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PK
Sbjct: 241 KKRPLEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPK 300

Query: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           SASGAFPCKSCKRAFGSETALQSHTKAKHS EK
Sbjct: 301 SASGAFPCKSCKRAFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of CmaCh06G004390 vs. NCBI nr
Match: KAG6596537.1 (Histone deacetylase HDT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.9 bits (1426), Expect = 1.0e-153
Identity = 307/329 (93.31%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 5   GAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSSEKFP 64
           GAEVKAGEPLLVSPGEENILHLSQACLGESK+KGSEQVFLYVKVGNQKLVLGTLSSEKFP
Sbjct: 14  GAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSSEKFP 73

Query: 65  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYTDSEE 124
           QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE                EESYTDSEE
Sbjct: 74  QVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEE----------------EESYTDSEE 133

Query: 125 DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISDEDDD 184
           DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNED SDEDDD
Sbjct: 134 DLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDSSDEDDD 193

Query: 185 EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP 244
           EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP
Sbjct: 194 EDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRP 253

Query: 245 LEAANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASG 304
           LEAANK PAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMP ASDQNKQQ PKSASG
Sbjct: 254 LEAANKAPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASG 313

Query: 305 AFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           AFPCKSCKRAFGSETALQSHTKAKHS EK
Sbjct: 314 AFPCKSCKRAFGSETALQSHTKAKHSAEK 326

[Close]

BLAST of CmaCh06G004390 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 195.3 bits (495), Expect = 8.5e-50
Identity = 149/335 (44.48%), Postives = 194/335 (57.91%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG + ++H+SQ  LGESKN  +E + LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           EKFPQ+S ++V +++F LSH WKNGSV F+GY                            
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSVFFSGY--------------------------KV 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           D+ +  P+ +ID+       +  PK           K+V    PN+    D K  +D  D
Sbjct: 121 DASDPEPEDLIDDQLEAAGFKAAPK--------SAAKQVNFQLPNE----DVKAKQD-DD 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
            D  E++ S DD++ N G+E   ++E   +  DS++DD ++D +D   E E+TPKK E  
Sbjct: 181 ADGSEEDSSDDDDSENSGDE---EEEKVTAESDSEEDDSSDDEEDDSSE-EETPKKPEEP 240

Query: 241 KKRPLEA-ANKTPAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKM----PPASDQNK 300
           KKR  E  ++K PA +KK K VTPQKTD KK   HVATPHPSKQAGK            +
Sbjct: 241 KKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQ 291

Query: 301 QQIPKSASGAFPCKSCKRAFGSETALQSHTKAKHS 331
           QQ PKSA GAF CKSC R F SE  LQSHTKAKHS
Sbjct: 301 QQTPKSA-GAFGCKSCTRTFTSEMGLQSHTKAKHS 291

[Close]

BLAST of CmaCh06G004390 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 155.2 bits (391), Expect = 9.8e-38
Identity = 137/334 (41.02%), Postives = 168/334 (50.30%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK+G+P+ V+P E  ++H+SQA LGE KNK  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           E  PQ+  DLVFDK+FELSH W  GSV+F GY +   E   +SE           EE   
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSE-----------EEE-- 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           + EE++P         +P+ +P    + KP                              
Sbjct: 121 EEEEEVPAGNAAKAVAKPKAKP---AEVKPAV---------------------------- 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
            DD+EDE  SD     G +EDDSD      G+DS             EE+E TPKK  +S
Sbjct: 181 -DDEEDESDSD-----GMDEDDSD------GEDS-------------EEEEPTPKKPASS 240

Query: 241 KKRPLEAANKTPAPDKKTKL-VTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIP 300
           KKR  E   K P   KK K+ VTPQKTD K            K+ GK          Q P
Sbjct: 241 KKRANETTPKAPVSAKKAKVAVTPQKTDEK------------KKGGKA-------ANQSP 245

Query: 301 KSASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           KSAS    C SCK+ F S  AL+SH KAKH+  K
Sbjct: 301 KSAS-QVSCGSCKKTFNSGNALESHNKAKHAAAK 245

[Close]

BLAST of CmaCh06G004390 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37
Identity = 135/334 (40.42%), Postives = 166/334 (49.70%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG EVK+G+P+ V+P E  ++H+SQA LGE KNK  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           E  PQ+  DLVFDK+FELSH W  GSV+F GY +   E   +SE                
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSE---------------- 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSGTKKKVQIVEPNKGGSIDTKKNEDISD 180
           + EE++P         +P+ +P    + KP                              
Sbjct: 121 EEEEEVPAGNAAKAVAKPKAKP---AEVKPAV---------------------------- 180

Query: 181 EDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEAS 240
            DD+EDE  SD     G +EDDSD      G+DS             EE+E TPKK  +S
Sbjct: 181 -DDEEDESDSD-----GMDEDDSD------GEDS-------------EEEEPTPKKPASS 240

Query: 241 KKRPLEAANKTPAPDKKTKL-VTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIP 300
           KKR  E   K P   KK K+ VTPQKTD K            K+ GK          Q P
Sbjct: 241 KKRANETTPKAPVSAKKAKVAVTPQKTDEK------------KKGGKA-------ANQSP 242

Query: 301 KSASGAFPCKSCKRAFGSETALQSHTKAKHSTEK 334
           KSAS    C SCK+ F S  AL+SH KAKH+  K
Sbjct: 301 KSAS-QVSCGSCKKTFNSGNALESHNKAKHAAAK 242

[Close]

BLAST of CmaCh06G004390 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 144.4 bits (363), Expect = 1.7e-34
Identity = 134/330 (40.61%), Postives = 174/330 (52.73%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E++++H+SQA L +   K  E V L V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           +KFPQ+SFDLVFDK+FELSH+    +VHF GY S   E+  F+                +
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFT----------------S 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSG-------TKKKVQIVEPNKGGSIDTK 180
             +ED+P+AV         P P P      G +G       TK K    +P +    + K
Sbjct: 121 SDDEDVPEAV---------PAPAPTAVTANGNAGAAVVKADTKPK---AKPAEVKPAEEK 180

Query: 181 KNEDISDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQT 240
              D  DE DDEDE   DD++  G + D+         DDSDDD+E ED +D  EE+E+T
Sbjct: 181 PESDEEDESDDEDESEEDDDSEKGMDVDE---------DDSDDDEE-EDSED--EEEEET 240

Query: 241 PKKAE-ASKKRPLEAANKTPAPDKKTK-----LVTPQKTDGKKGVPHVATPHPSKQAGKM 300
           PKK E  +KKRP E+ +KTP   KK K       TPQKT+ KK   H ATPHP+K+ GK 
Sbjct: 241 PKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKS 285

Query: 301 PPASDQNKQQIPKSASGAFPCKSCKRAFGS 318
           P     N  Q PKS   +    + K+ F S
Sbjct: 301 P----VNANQSPKSGGQSSGGNNNKKPFNS 285

[Close]

BLAST of CmaCh06G004390 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-34
Identity = 135/330 (40.91%), Postives = 175/330 (53.03%), Query Frame = 0


Query: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E++++H+SQA L +   K  E V L V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEYPFSEFLNNFIFLIATEESYT 120
           +KFPQ+SFDLVFDK+FELSH+    +VHF GY S   E+  F+                +
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFT----------------S 120

Query: 121 DSEEDLPQAVIDNGKPEPQPQPQPKKDEKPGTSG-------TKKKVQIVEPNKGGSIDTK 180
             +ED+P+AV         P P P      G +G       TK K    +P +    + K
Sbjct: 121 SDDEDVPEAV---------PAPAPTAVTANGNAGAAVVKADTKPK---AKPAEVKPAEEK 180

Query: 181 KNEDISDEDDDEDEDSSDDENANGGEEDDSDDENEFSGDDSDDDDENEDLDDSMEEDEQT 240
              D  DE DDEDE   DD++  G + D+         DDSDDD+E ED +D  EE+E+T
Sbjct: 181 PESDEEDESDDEDESEEDDDSEKGMDVDE---------DDSDDDEE-EDSED--EEEEET 240

Query: 241 PKKAE-ASKKRPLEAANKTPAPDKKTK-----LVTPQKTDGKKGVPHVATPHPSKQAGKM 300
           PKK E  +KKRP E+ +KTP   KK K       TPQKT+ KKG  H ATPHP+K+ GK 
Sbjct: 241 PKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKG-GHTATPHPAKKGGKS 284

Query: 301 PPASDQNKQQIPKSASGAFPCKSCKRAFGS 318
           P     N  Q PKS   +    + K+ F S
Sbjct: 301 P----VNANQSPKSGGQSSGGNNNKKPFNS 284

The following BLAST results are available for this feature:

BLAST of CmaCh06G004390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	3.2e-62	48.05	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q9LZR5	1.2e-48	44.48	Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2	[more]
Q9M4U5	4.6e-48	44.35	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
O24591	1.5e-43	44.44	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]
Q9M4U4	2.9e-42	45.07	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]

BLAST of CmaCh06G004390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KU46	3.2e-161	95.20	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 S...	[more]
A0A6J1G3S8	3.1e-156	92.79	histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1	[more]
A0A6J1CUC4	1.9e-126	79.82	histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=...	[more]
A0A1S3B626	1.6e-125	78.34	histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1	[more]
A0A0A0LEE5	3.4e-123	77.45	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 P...	[more]

BLAST of CmaCh06G004390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005787.1	6.5e-161	95.20	histone deacetylase HDT1-like [Cucurbita maxima]	[more]
KAG7028070.1	2.3e-158	95.14	Histone deacetylase HDT3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023540314.1	2.8e-156	93.09	histone deacetylase HDT1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946410.1	6.3e-156	92.79	histone deacetylase HDT1 [Cucurbita moschata]	[more]
KAG6596537.1	1.0e-153	93.31	Histone deacetylase HDT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh06G004390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03740.1	8.5e-50	44.48	histone deacetylase 2C	[more]
AT3G44750.1	9.8e-38	41.02	histone deacetylase 3	[more]
AT3G44750.2	1.3e-37	40.42	histone deacetylase 3	[more]
AT5G22650.1	1.7e-34	40.61	histone deacetylase 2B	[more]
AT5G22650.2	2.9e-34	40.91	histone deacetylase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..93 e-value: 4.2E-14 score: 53.1
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..96 e-value: 1.1E-18 score: 69.3
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 304..332 e-value: 1.6E-5 score: 27.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..253
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..328
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 1..328
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 308..329
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 306..334 score: 12.403669

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G004390.1	CmaCh06G004390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0005730	nucleolus