CmaCh06G004040 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G004040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionsplicing factor 3A subunit 2
LocationCma_Chr06: 1876633 .. 1879568 (+)
RNA-Seq ExpressionCmaCh06G004040
SyntenyCmaCh06G004040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGTCATTCAGACTTCAGGCCCTACAAAGTTTTCATTTCGTCGATATGATAAACAGGAGGGCTTCTTAGGTCGCCGGAGAAAGGAGAGGGCTTTTTCTCAGTCGGAAATCGAAATTCAGTAAAGAAGCGACGCCGGAGTTTGACGGCGATGGATAGAGAGTGGGGGTCCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGGTCCTCCTTCTCTATTTCTCCTCCTAATTTTATCCGTTCTTTTGGAAAATTTTGAGTTGAATTGTATTTCTTTCGGTGTGTTTTTGTAGTTACGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACACAGGGGAAGCGCCATCAGACTAATTTGGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGGTAAGCATTATGCTCCCCCTTTTAAAAAAAATTCCACATTAATTTTGGATATGAGGGTGAACCATAATGTTATTCTTGCTTGTTTGTAATCTTTGTGAAGGGTTGTTGCCAAGCTAATTTTAAATTGCTTTCAGTAGTGACTTTTGTATTTTCCACCCCTTGCAATTGGATTGATAATGTGCTTGATTTCGCCATTTATTGCAATTAGAACTATAATGCCATAATGGTTCTGTTTGTTCATTTATAACTGAAGTGTGATAGCTTGAAAGGGCATTAGGAATAGCGAGTAGATTTCTGTTTATGTCAAGTAACATAAACATGTATCCAACCGACACCAAGTCAAATAAGAGTCCATGATTTGAAATGTTCATTGTTTCAAAGTGGTTTTGAAATTTTGAAGTTTTGGTTGTTGTCTTAGTTGGATGTATTCATATTTTTTTGGTACTTAAAATGAAGTTTGTGTTAATTATCTCCTTTTCTGGCTTGCTTTCAGTTAAAATTGGGAGGCCTGGTTATCGTGTAACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAGGTATGGCTTTGTAGTTCATACAAAACACCTTTGTGTATCTGTTGAAGATGATATTATTTTGCATTACTCCATTGTATTGTGTCTGTCTTGCCCTGCCCTTCCGTTTACTTGTATACTGTTGCATCATGCAGATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACATCGGTTTATGTCCTCTTATGAGCAGGTTCTTTGTATAATTGAATAGTACCTAAGTTCCATCATTCATATGCTTTTGAAAACATGATATTTCCTTTTACCACTTCTATCGCTATTGGAATATCTTTTTAGAGCTAATTTTTCTGTCTTTCTTGTTATTATGTTCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATTGCATTCAAGGTATTTGAGTCATGCTATTTGTAAAAGCTGTTGATCAATGGCTTAGCTCACAGTTCCTAAAGATCTTTACATGTATGCATTTTAGGTTCCAAGCACAGAGATTGACAAATCCACACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGGTTAGGTTCTTTCAATTTGTTAGAATACTTTTTCTATTCATTCACACCCTTAGCCCACTACTTACAGTTCAGCTGTATCTTAGGATTTGATCTATAACTTTTCAATGAATGAATACCTTTTCTTCTGGAACCTACTTAGTTATTGTACCAGTCTATTGTAGCTTGTATTCGCTGTAACTCTTGCTGGTCGTTTGAATTATTGATTGAATAGATTGCATCTTGATTCCCCTTTGCATTATTTTGGCTTTGGGCCCCTTTGTGCATGCAGATGTTTGACTAGCTTATTTAGTTGCCGTCTCTTCATATGGTTGATCTTTTGTCTTTTCATATTAAAAAATTGACACTCTTTCCATAATATATGTATTCTTGTGTTTAAGGACTCATACTTCACCTTGCAACCAACAGCCTAAATGGCTTCTAGCTTTCCAGCTGCATGTAGGGCATTGTTATTAATGGCACGGTTTACTGTTCTATTTAGTTTTTGGTGTCCAACTTCTCTAACATGGTTTTAGCAAACGTGAAAATATGCAGTTGCAGTTGTATTTCAAATCCAAACCACAAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCAATGGAACGGTGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCCTCCGATGCCTGGATCCTTGCCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCTGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGATTCCCAGGCCAGGGTGTCCGTCAGCCACCTCCACCGCCACCCAATATGGGATAGGCCACAGAATATTAGTTAAGTAGAATGGTTTGAGAAGACAATTTGGTACTGGACGTTCGGTGGACTTTAATCGTTGGCCTCACTAGTGAAAGTTTGAAGCACTTTTCCGTTGTATCGTCATATTTTGGCATGTAGAATCTTAACATGCCTTGATTGTTGTATCCTTTCAGGCAAAGTAAAAGAATTTTGTTAATTCTATGTCCAAAAAAAAAAATTGTTAATGATCTTTATTTTCAAGGTGAAGAAATGTTTTGCGTTTGCTCTTTTTAAAGAAAAAGCTTGTATTTCAGCCAAAATGTTTAAGCAACG

mRNA sequence

ATGAGTGGAGGGCTTCTTAGGTCGCCGGAGAAAGGAGAGGGCTTTTTCTCAGTCGGAAATCGAAATTCAGTAAAGAAGCGACGCCGGAGTTTGACGGCGATGGATAGAGAGTGGGGGTCCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTACGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACACAGGGGAAGCGCCATCAGACTAATTTGGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGGAGGCCTGGTTATCGTGTAACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAGATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACATCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCCACACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGTTGCAGTTGTATTTCAAATCCAAACCACAAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCAATGGAACGGTGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCCTCCGATGCCTGGATCCTTGCCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCTGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGATTCCCAGGCCAGGGTGTCCGTCAGCCACCTCCACCGCCACCCAATATGGGATAGGCCACAGAATATTAGTTAAGTAGAATGGTTTGAGAAGACAATTTGGTACTGGACGTTCGGTGGACTTTAATCGTTGGCCTCACTAGTGAAAGTTTGAAGCACTTTTCCGTTGTATCGTCATATTTTGGCATGTAGAATCTTAACATGCCTTGATTGTTGTATCCTTTCAGGCAAAGTAAAAGAATTTTGTTAATTCTATGTCCAAAAAAAAAAATTGTTAATGATCTTTATTTTCAAGGTGAAGAAATGTTTTGCGTTTGCTCTTTTTAAAGAAAAAGCTTGTATTTCAGCCAAAATGTTTAAGCAACG

Coding sequence (CDS)

ATGAGTGGAGGGCTTCTTAGGTCGCCGGAGAAAGGAGAGGGCTTTTTCTCAGTCGGAAATCGAAATTCAGTAAAGAAGCGACGCCGGAGTTTGACGGCGATGGATAGAGAGTGGGGGTCCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTACGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACACAGGGGAAGCGCCATCAGACTAATTTGGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGGAGGCCTGGTTATCGTGTAACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAGATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACATCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCCACACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGTTGCAGTTGTATTTCAAATCCAAACCACAAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCAATGGAACGGTGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCCTCCGATGCCTGGATCCTTGCCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCTGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGATTCCCAGGCCAGGGTGTCCGTCAGCCACCTCCACCGCCACCCAATATGGGATAG

Protein sequence

MSGGLLRSPEKGEGFFSVGNRNSVKKRRRSLTAMDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Homology
[Close]
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match: Q6AXT8 (Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.5e-80
Identity = 197/333 (59.16%), Postives = 228/333 (68.47%), Query Frame = 0 

Query: 39  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 98
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 99  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 158
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 159 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 218
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 219 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPPPPPPP 278
           IDK+  KF++HW+ ++K F LQ +FK +     KP   P+      LP  P     PPPP
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKME-----KPPAPPS------LPAGPPGVKRPPPP 247

Query: 279 PQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQ 338
              G PPR   PP+P +LPPPPP     PP P P G AP  PP PP     M    PG  
Sbjct: 248 LMNGLPPR---PPLPDALPPPPPGGLPLPPMP-PTGPAPSGPPGPP----QMPPPAPGVH 307

Query: 339 MNRLPMPPPPQGF--PGQGVRQPPP--PPPNMG 368
                + PP  G   P  GV  P P   PP  G
Sbjct: 308 PPAPVVHPPTSGVHPPAPGVHPPAPVVHPPTSG 321

[Close]
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match: Q15428 (Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-78
Identity = 203/366 (55.46%), Postives = 236/366 (64.48%), Query Frame = 0 

Query: 39  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 98
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 99  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 158
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ DSE 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDSEM 127

Query: 159 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 218
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 219 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAA------------NGTVPLP 278
           IDK+  KF++HW+ ++K F LQ +FK +   A  P ++PA             NG  P P
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPA--PPSLPAGPPGVKRPPPPLMNGLPPRP 247

Query: 279 PPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMP 338
           P P++ PPPPP     PP     P    PP P  LPPP     PP     PP     P  
Sbjct: 248 PLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPA 307

Query: 339 PGGAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP--- 368
           PG  PP P   PP P  +   +   P       P P   PP  G   P  GV  P P   
Sbjct: 308 PGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVH 367

[Close]
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match: A5PJN8 (Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.5e-78
Identity = 203/366 (55.46%), Postives = 238/366 (65.03%), Query Frame = 0 

Query: 39  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 98
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 99  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 158
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 159 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 218
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 219 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAA------------NGTVPLP 278
           IDK+  KF++HW+ ++K F LQ +FK +   A  P ++PA             NG  P P
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPA--PPSLPAGPPGVKRPPPPLMNGLPPRP 247

Query: 279 PPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMP 338
           P P++ PPPPP     PP   + P    PP P  LPPP     PP     PP     P  
Sbjct: 248 PLPESLPPPPPGGLPLPPMPPSGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPA 307

Query: 339 PGGAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP--- 368
           PG  PP P   PP PV +   +   P       P P   PP  G   P  GV  P P   
Sbjct: 308 PGVHPPAPGVHPPAPVVHPPASGVHP-------PAPGVHPPAPGVHPPAPGVHPPAPGVH 364

[Close]
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match: Q62203 (Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-74
Identity = 193/333 (57.96%), Postives = 220/333 (66.07%), Query Frame = 0 

Query: 39  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 98
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 99  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 158
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEQVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 159 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 218
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 219 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPPPPPPP 278
           IDK+  KF          F LQ +FK +     KP   P+      LP  P     PPPP
Sbjct: 188 IDKAEGKF----------FFLQFHFKME-----KPPAPPS------LPAGPPGVKRPPPP 247

Query: 279 PQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQ 338
              G PPR   PP+P +LPPPPP     PP P P G AP  PP PP     M    PG  
Sbjct: 248 LMNGLPPR---PPLPDALPPPPPGGLPLPPMP-PTGPAPSGPPGPP----QMPPPAPGVH 307

Query: 339 MNRLPMPPPPQGF--PGQGVRQPPP--PPPNMG 368
                + PP  G   P  GV  P P   PP  G
Sbjct: 308 PPAPVVHPPTSGVHPPAPGVHPPAPVVHPPTSG 311

[Close]
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match: Q54B65 (Splicing factor 3A subunit 2 OS=Dictyostelium discoideum OX=44689 GN=sf3a2 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.4e-66
Identity = 131/214 (61.21%), Postives = 170/214 (79.44%), Query Frame = 0 

Query: 37  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNN 96
           E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN
Sbjct: 3   EYG-KAGSGGLQSSQYDNIDRRERQKQLVLEHVDVSKDPYIISNHIGSFECRLCLTVHNN 62

Query: 97  EGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KRKVSVRKTVKIGRPGYRVTKQ 156
            GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     +V  +KT+KIGRPGY++ KQ
Sbjct: 63  VGNYLAHTQGKKHQTHLARRAAKEQRENPSVSKNNYIQTTRVIHKKTIKIGRPGYKIIKQ 122

Query: 157 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 216
            DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK
Sbjct: 123 RDSKTGQLSLLFQIDYPEIESGLQPRHRIMSAFEQRVEQPNKDYQYLLFAAEPYETIAFK 182

Query: 217 VPSTEIDKST---PKFFSHWDPDSKMFTLQLYFK 245
           +P+ EID++T    KFF+HWD  +K FTLQLYFK
Sbjct: 183 IPNKEIDRTTGPDGKFFTHWD-RNKTFTLQLYFK 214

[Close]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match: A0A6J1KWM2 (splicing factor 3A subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111498269 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.1e-180
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 333
           PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Sbjct: 241 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 300

Query: 334 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Sbjct: 301 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match: A0A6J1FF65 (splicing factor 3A subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111443387 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKP EANKPQTVPAANGTVPLPPPPQAPP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 333
           PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Sbjct: 241 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 300

Query: 334 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Sbjct: 301 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match: A0A0A0LEB1 (Matrin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G743440 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.6e-174
Identity = 327/341 (95.89%), Postives = 330/341 (96.77%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 274 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 333
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPP+G
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPIG 300

Query: 334 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           NNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match: A0A5D3DPC7 (Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002950 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.4e-174
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 274 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 333
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 334 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match: A0A1S3B729 (splicing factor 3A subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486522 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.4e-174
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 274 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 333
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 334 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of CmaCh06G004040 vs. NCBI nr
Match: XP_023005145.1 (splicing factor 3A subunit 2 [Cucurbita maxima])

HSP 1 Score: 640.6 bits (1651), Expect = 8.4e-180
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 333
           PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Sbjct: 241 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 300

Query: 334 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Sbjct: 301 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of CmaCh06G004040 vs. NCBI nr
Match: XP_022936955.1 (splicing factor 3A subunit 2 [Cucurbita moschata] >KAG6596497.1 Splicing factor 3A subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028045.1 Splicing factor 3A subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637.9 bits (1644), Expect = 5.4e-179
Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKP EANKPQTVPAANGTVPLPPPPQAPP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 333
           PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Sbjct: 241 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 300

Query: 334 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Sbjct: 301 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of CmaCh06G004040 vs. NCBI nr
Match: XP_023540957.1 (splicing factor 3A subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178
Identity = 332/334 (99.40%), Postives = 332/334 (99.40%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKP EANKPQTVPAANGT PLPPPPQAPP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKPQTVPAANGTAPLPPPPQAPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 333
           PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Sbjct: 241 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF 300

Query: 334 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Sbjct: 301 TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of CmaCh06G004040 vs. NCBI nr
Match: XP_004137848.1 (splicing factor 3A subunit 2 [Cucumis sativus] >KGN59007.1 hypothetical protein Csa_002498 [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 5.3e-174
Identity = 327/341 (95.89%), Postives = 330/341 (96.77%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 274 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 333
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPP+G
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPIG 300

Query: 334 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           NNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of CmaCh06G004040 vs. NCBI nr
Match: XP_008442733.1 (PREDICTED: splicing factor 3A subunit 2 [Cucumis melo] >TYK25169.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 620.5 bits (1599), Expect = 9.0e-174
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 273
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 274 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 333
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 334 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 368
           NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of CmaCh06G004040 vs. TAIR 10
Match: AT2G32600.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 425.2 bits (1092), Expect = 5.2e-119
Identity = 230/282 (81.56%), Postives = 240/282 (85.11%), Query Frame = 0 

Query: 34  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 93
           MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASGQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 94  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 153
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR VSVR+TVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPLKRNVSVRRTVKIGRPGYRVTKQ 120

Query: 154 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 213
           +D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFK
Sbjct: 121 YDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYLLFAAEPYEIIAFK 180

Query: 214 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPLPPPPQAPP 273
           VPSTE+DKSTPKFFSHWDPDSKMFTLQ+YFK    E NKPQ+   ANG          PP
Sbjct: 181 VPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNKPQSAVGANG---------LPP 240

Query: 274 PPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGG 316
           PPPPPP Q  P   PPPP  G  PPPPP MAN   RPMPP G
Sbjct: 241 PPPPPPHQAQP---PPPPPSGLFPPPPPPMANNGFRPMPPAG 270

[Close]
BLAST of CmaCh06G004040 vs. TAIR 10
Match: AT5G07740.1 (actin binding )

HSP 1 Score: 47.0 bits (110), Expect = 3.8e-05
Identity = 61/124 (49.19%), Postives = 64/124 (51.61%), Query Frame = 0 

Query: 250  ANKPQTVPAANGTVPLPPPPQ-----APPPPPPPPQQGAPPRVPPPPM-PGSLPPPPPVM 309
            A  P   P  +G  P PPPP      APPPPPPPP  G  P  PPPPM  G+ PPPPP M
Sbjct: 1056 APPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPMFGGAQPPPPPPM 1115

Query: 310  ANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPP 365
              G P P PP   GGAPP PPPP  G        P       P PPPP   P +G   PP
Sbjct: 1116 RGGAPPPPPPPMRGGAPPPPPPPMRGGAPPP--PPPPMHGGAPPPPPP---PMRGGAPPP 1174

The following BLAST results are available for this feature:
BLAST of CmaCh06G004040 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6AXT83.5e-8059.16Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1[more]
Q154281.5e-7855.46Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2[more]
A5PJN82.5e-7855.46Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1[more]
Q622034.9e-7457.96Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2[more]
Q54B658.4e-6661.21Splicing factor 3A subunit 2 OS=Dictyostelium discoideum OX=44689 GN=sf3a2 PE=3 ... [more]
BLAST of CmaCh06G004040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KWM24.1e-180100.00splicing factor 3A subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111498269 PE=3 SV... [more]
A0A6J1FF652.6e-17999.70splicing factor 3A subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111443387 PE=3 ... [more]
A0A0A0LEB12.6e-17495.89Matrin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G743440... [more]
A0A5D3DPC74.4e-17496.19Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3B7294.4e-17496.19splicing factor 3A subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486522 PE=3 SV=1[more]
BLAST of CmaCh06G004040 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023005145.18.4e-180100.00splicing factor 3A subunit 2 [Cucurbita maxima][more]
XP_022936955.15.4e-17999.70splicing factor 3A subunit 2 [Cucurbita moschata] >KAG6596497.1 Splicing factor ... [more]
XP_023540957.11.6e-17899.40splicing factor 3A subunit 2 [Cucurbita pepo subsp. pepo][more]
XP_004137848.15.3e-17495.89splicing factor 3A subunit 2 [Cucumis sativus] >KGN59007.1 hypothetical protein ... [more]
XP_008442733.19.0e-17496.19PREDICTED: splicing factor 3A subunit 2 [Cucumis melo] >TYK25169.1 splicing fact... [more]
BLAST of CmaCh06G004040 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32600.15.2e-11981.56hydroxyproline-rich glycoprotein family protein [more]
AT5G07740.13.8e-0549.19actin binding [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01050CactinC_cactus_3coord: 122..249
e-value: 6.7E-19
score: 78.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 79..122
e-value: 3.7E-5
score: 25.2
NoneNo IPR availableGENE3D2.60.40.2690coord: 126..252
e-value: 2.0E-38
score: 133.2
NoneNo IPR availablePFAMPF12874zf-metcoord: 85..109
e-value: 2.1E-6
score: 27.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..367
NoneNo IPR availablePANTHERPTHR23205SPLICING FACTOR 3A SUBUNIT 2coord: 34..361
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 82..116
e-value: 9.0E-8
score: 41.8
IPR031781SF3A2 domainPFAMPF16835SF3A2coord: 143..237
e-value: 8.8E-35
score: 118.9
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 85..115
score: 9.295713
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 81..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G004040.1CmaCh06G004040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000245 spliceosomal complex assembly
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0005686 U2 snRNP
cellular_component GO:0071004 U2-type prespliceosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding