CmaCh06G003370 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G003370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionSuppressor protein SRP40-like isoform X2
LocationCma_Chr06: 1574592 .. 1575766 (+)
RNA-Seq ExpressionCmaCh06G003370
SyntenyCmaCh06G003370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACAGATTTTCAAAAAAGTTCCTTAAAAAAAATTGTTAAAGAGAGTTCATCTTTCCACTTTTTTTGACTATTTGAGATCTAATCCAAGCAGTTGTTCCAAGGCCAAGAAAATGGCACATAGTACCAAGGTGGACATCAAATGGAGGTCTCTCTCTCTCTTTCTCTTGCTCTAGACTTAAACTCTGATCTGGGTAGTGGTTTTGTCCAATCTCTCTTTCTCTCTATAATGGTGTTATCTATTTTCTCTCTAAAATTTGACGTAGGTTTTGTGCCATCTATCTTTTTCTCTAAAATGTGATGTGGGTATCTTTTTCTCTAAAATGTGATGTGGGTTTTGTGCTATGTACCTATCTTTCTAAACTTTGATGTGGATTTTGTGGCAGTGGCAACACAATGGAAGGAAGTGAAGTTTTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGGTACTACCAATGCCAAAGTTCTCCTTGACTTTAGATCATAATTTGGTCCATTTTCCCTATTGTATTTCTTTCAAGCATTTTATCAAACATATTGCAGTCAACAGAGTTAGAGAAGAAAATCACAGAGCAGAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTGACCTTTCTTTCACGATGTTGAACTCAGAACCGTCCATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACGTCTCTCCCAATCAATTCGCAGACCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCACTACCAGCTCGAGTTCCTCAGGTTCAGAAATTTTCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGAGGAATTCAATTCCGTGGACGATTCACTCGCATTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACAGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTTAACATGATGAAAGTTAGCCCAGTTTGAACTGAGAGATAGAGAAAGAAAGATTTTGGATTTGTAGATGGG

mRNA sequence

AGACAGATTTTCAAAAAAGTTCCTTAAAAAAAATTGTTAAAGAGAGTTCATCTTTCCACTTTTTTTGACTATTTGAGATCTAATCCAAGCAGTTGTTCCAAGGCCAAGAAAATGGCACATAGTACCAAGGTGGACATCAAATGGAGTGGCAACACAATGGAAGGAAGTGAAGTTTTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGAAAATCACAGAGCAGAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTGACCTTTCTTTCACGATGTTGAACTCAGAACCGTCCATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACGTCTCTCCCAATCAATTCGCAGACCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCACTACCAGCTCGAGTTCCTCAGGTTCAGAAATTTTCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGAGGAATTCAATTCCGTGGACGATTCACTCGCATTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACAGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTTAACATGATGAAAGTTAGCCCAGTTTGAACTGAGAGATAGAGAAAGAAAGATTTTGGATTTGTAGATGGG

Coding sequence (CDS)

ATGGCACATAGTACCAAGGTGGACATCAAATGGAGTGGCAACACAATGGAAGGAAGTGAAGTTTTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGAAAATCACAGAGCAGAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGAAGAAAAAGCTCGAATCACTTGACCTTTCTTTCACGATGTTGAACTCAGAACCGTCCATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACGTCTCTCCCAATCAATTCGCAGACCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCACTACCAGCTCGAGTTCCTCAGGTTCAGAAATTTTCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGAGGAATTCAATTCCGTGGACGATTCACTCGCATTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACAGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTTAACATGATGAAAGTTAGCCCAGTTTGA

Protein sequence

MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKITEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNSPEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Homology
BLAST of CmaCh06G003370 vs. ExPASy TrEMBL
Match: A0A6J1L305 (uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.3e-111
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI
Sbjct: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of CmaCh06G003370 vs. ExPASy TrEMBL
Match: A0A6J1CXG5 (uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015099 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.3e-71
Identity = 162/228 (71.05%), Postives = 185/228 (81.14%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MA + K DIKWSGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEK+I
Sbjct: 1   MAPNAKEDIKWSGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQ  MRTKAEKKL+LL+KKLESL+L  T + SEPS+SSEICD ++PKTL  A+SLP N+
Sbjct: 61  TEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNA 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           Q  GEISHS+E NPNARG  + SSS SEI  ++ SK KIEN G+EF S  DS A VAVNS
Sbjct: 121 QATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNS 180

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 181 PENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of CmaCh06G003370 vs. ExPASy TrEMBL
Match: A0A1S3B6U8 (uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69
Identity = 164/230 (71.30%), Postives = 196/230 (85.22%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKK 60
           M+  TK+DIKWSGN M EG EV KTMECLRRRLLAER ASLLAKEEAE+M KRS+ELEK+
Sbjct: 67  MSPYTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQ 126

Query: 61  ITEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPIN 120
           IT+Q QM+ +AEKKLQLLKKKLESL+LS TM+NSE SISSEIC+EDEPKTL     LP N
Sbjct: 127 ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRN 186

Query: 121 SQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVN 180
           S+ I EISHS+EEN NARG+T+S+ S S+I+S+E SK K  + G+EF+SVDDSLA VAV+
Sbjct: 187 SKGINEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVD 246

Query: 181 SPEETETGE-MKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           SPE++ETGE +K VISER+IEVLNDLK+AR RIQ SM+ICE +M++VSPV
Sbjct: 247 SPEKSETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of CmaCh06G003370 vs. ExPASy TrEMBL
Match: A0A0A0LDB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.4e-66
Identity = 158/230 (68.70%), Postives = 193/230 (83.91%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKK 60
           MA +TK+DIKWSGN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KRS+ELEK+
Sbjct: 1   MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQ 60

Query: 61  ITEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPIN 120
           IT+Q QM+ +AEKKLQLLKKKLESL+LS TM+NSE S+SSEIC+E+EPKT      LP +
Sbjct: 61  ITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSH 120

Query: 121 SQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVN 180
           S+ I EI HS+EEN NARG+TSS+ S S+I S++ SK KI N G+E +SVDDSLA VAV+
Sbjct: 121 SKGISEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVD 180

Query: 181 SPEETETGE-MKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           SP ++ET E +K VISER+IEVLNDLK+ARERIQ SMK+C+ +M++VSP+
Sbjct: 181 SPAKSETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229

BLAST of CmaCh06G003370 vs. ExPASy TrEMBL
Match: A0A6J1F6W6 (uncharacterized protein LOC111442665 OS=Cucurbita moschata OX=3662 GN=LOC111442665 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 7.1e-66
Identity = 146/158 (92.41%), Postives = 150/158 (94.94%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MAH TK+DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1   MAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQNQMRTKAEKKLQLLKKKLESL+LSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEK 159
           QTIGEISHSDEENPNARG+TSSS S SEI SNE    K
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSFSDSEICSNERKDRK 158

BLAST of CmaCh06G003370 vs. NCBI nr
Match: XP_023005738.1 (uncharacterized protein LOC111498645 [Cucurbita maxima])

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI
Sbjct: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of CmaCh06G003370 vs. NCBI nr
Match: XP_023538931.1 (uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 216/228 (94.74%), Postives = 223/228 (97.81%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MAHSTK+DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1   MAHSTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQNQMRTKAEKKLQLLKKKLESL+LSFTMLNSEPSISSEICD+DEPKTLT ATSLP NS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDDDEPKTLTTATSLPSNS 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           QTIGEISHSDEENPNARG+TSSSSSGSEI SNESSKEKIENSG+EFNSV+DSLA VAVNS
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSSSGSEICSNESSKEKIENSGDEFNSVNDSLALVAVNS 180

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PEE ETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEEAETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of CmaCh06G003370 vs. NCBI nr
Match: KAG7027980.1 (hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 8.8e-103
Identity = 215/228 (94.30%), Postives = 221/228 (96.93%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           +AH TK+DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 55  IAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 114

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQNQMRTKAEKKLQLL KKLESL+LSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 115 TEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 174

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           Q IGEISHSDEENPNARG+TSSSSS SEI SNESSKEKIENSG+ FNSVDDSLA VAVNS
Sbjct: 175 QAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNS 234

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 235 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 282

BLAST of CmaCh06G003370 vs. NCBI nr
Match: XP_038906280.1 (uncharacterized protein LOC120092141 [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 5.6e-73
Identity = 168/222 (75.68%), Postives = 191/222 (86.04%), Query Frame = 0

Query: 8   DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKITEQNQMR 67
           +IKWSGN MEG EV KTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+IT+Q QM+
Sbjct: 18  NIKWSGNKMEGGEVSKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITKQIQMK 77

Query: 68  TKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQTIGEIS 127
           TKAEKKLQLLKKKL SL+LS TM+NSE S+SSEICDEDEPKTL    SL  NS+ IGEIS
Sbjct: 78  TKAEKKLQLLKKKLGSLNLSTTMVNSEASVSSEICDEDEPKTLIEVPSLLSNSKAIGEIS 137

Query: 128 HSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNSPEETETG 187
           H +EEN NARG+TSS+SS SEI S+E SK KI    +EF+SVDDSLA VAVNSP ++ETG
Sbjct: 138 HLEEENRNARGSTSSNSSASEICSDEPSKTKIGKCEKEFDSVDDSLAIVAVNSPGKSETG 197

Query: 188 -EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
            E+K +ISER+IEVLNDLK ARE I+ SMKICE+NM++VSPV
Sbjct: 198 DELKPLISERIIEVLNDLKHARETIRSSMKICEVNMIEVSPV 239

BLAST of CmaCh06G003370 vs. NCBI nr
Match: XP_022145707.1 (uncharacterized protein LOC111015099 [Momordica charantia])

HSP 1 Score: 277.7 bits (709), Expect = 8.9e-71
Identity = 162/228 (71.05%), Postives = 185/228 (81.14%), Query Frame = 0

Query: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60
           MA + K DIKWSGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEK+I
Sbjct: 1   MAPNAKEDIKWSGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQI 60

Query: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120
           TEQ  MRTKAEKKL+LL+KKLESL+L  T + SEPS+SSEICD ++PKTL  A+SLP N+
Sbjct: 61  TEQIHMRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNA 120

Query: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180
           Q  GEISHS+E NPNARG  + SSS SEI  ++ SK KIEN G+EF S  DS A VAVNS
Sbjct: 121 QATGEISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNS 180

Query: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 229
           PE ++TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 181 PENSKTGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of CmaCh06G003370 vs. TAIR 10
Match: AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )

HSP 1 Score: 62.0 bits (149), Expect = 7.1e-10
Identity = 62/182 (34.07%), Postives = 97/182 (53.30%), Query Frame = 0

Query: 3   HSTKVDIKWSGNTMEGSEV----LKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK 62
           ++TK    ++   ME  E      +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+
Sbjct: 67  YNTKCRTNFASKKMEEEEEKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELER 126

Query: 63  KITEQNQMRTKAEKKLQLLKKKLESLDLSFT---MLNSEPSISSEIC-----DEDEPKTL 122
            + E+ ++R KAEK+L+LL KKLE +  S +     +SE S  S +C     +E+E    
Sbjct: 127 NLKEEIRLREKAEKRLKLLMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHD 186

Query: 123 TAATSLPINSQTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVD 173
           + A            ++ ++E + +++    SS   S + S  S KE+    G EF+   
Sbjct: 187 SGAVDEGKTDHATENVASTEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYS 246

BLAST of CmaCh06G003370 vs. TAIR 10
Match: AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = 0

Query: 17  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKITEQNQMRTKAEKKLQL 76
           E  E  +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + E+ ++R KAEK+L+L
Sbjct: 6   EKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKL 65

Query: 77  LKKKLESLDLSFT---MLNSEPSISSEIC-----DEDEPKTLTAATSLPINSQTIGEISH 136
           L KKLE +  S +     +SE S  S +C     +E+E    + A            ++ 
Sbjct: 66  LMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVAS 125

Query: 137 SDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDS 173
           ++E + +++    SS   S + S  S KE+    G EF+   D+
Sbjct: 126 TEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1L3057.3e-111100.00uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645... [more]
A0A6J1CXG54.3e-7171.05uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A1S3B6U81.4e-6971.30uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=... [more]
A0A0A0LDB52.4e-6668.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1[more]
A0A6J1F6W67.1e-6692.41uncharacterized protein LOC111442665 OS=Cucurbita moschata OX=3662 GN=LOC1114426... [more]
Match NameE-valueIdentityDescription
XP_023005738.11.5e-110100.00uncharacterized protein LOC111498645 [Cucurbita maxima][more]
XP_023538931.14.7e-10494.74uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo][more]
KAG7027980.18.8e-10394.30hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038906280.15.6e-7375.68uncharacterized protein LOC120092141 [Benincasa hispida][more]
XP_022145707.18.9e-7171.05uncharacterized protein LOC111015099 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT2G37300.27.1e-1034.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G37300.19.3e-1035.98unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availableCOILSCoilCoilcoord: 53..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..152
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 1..105
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 1..105
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 122..217
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 122..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G003370.1CmaCh06G003370.1mRNA