CmaCh06G003010 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G003010
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionAnkyrin repeat family protein
LocationCma_Chr06: 1433463 .. 1437642 (+)
RNA-Seq ExpressionCmaCh06G003010
SyntenyCmaCh06G003010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGTTTTTTAAGTAAGAGGTATTTTGAATGTTGATGAACTGAAATTACCATACTGAACCGTTGGCTAGTAGCTGAAGAACAAAACAAGGGAGGGCATAATAGTCATTAGATCACCTTTAAATTGGATGGCAGTACGAAATTATTCTCCCACGTCCTTTCCCTCCACCAGCTCCCGTCTGTTTCATTGAAAGTAGCTTCATTCCTTCACAGTTCAAATGAGCGTGATCTTGCAAGGCCAATGCCAATGGCGTCGTTTGAAAGCCATGTGATGCATATTGCAAGACCGATCGTACGTTTTTGTTCTCTATAATTTACGGTTTTCGCTCGTTTGTTCCTTCTCCATTCTGGTTCGTCGATTTCTTTCGTTTAATTATTGCTCTTCCTCCTCAATTTGATAATCGTATTGGCAGTTGGATTGAACTCTTCGTCGTATGTATGAGACTCTGAATTGATCCCCTCCGCTTTGCTCCTGGCACATTATTCCACTCGCTGCTTTCAGATTCAAGCATGGCTCAACAGGTACCTCTCTCTTCTCTCTGTGTAGAAATTTTGAGTGCTTAATTTTGCCCTAATTTTGCGGTTGATATTGTGAATGTAGGAAGATGGATGGCCGGGCTTACGGCTAATGAACGCCAGAGTTGGATTGGCGGGAAATCATCATGATCTCTCTGCTTTGTTTTCTTTCAATACTTTGCGAACTCATTCTCCTAGCTCCTTCACCGAGTCTTCCTCAGATCTTGATACAGAGGTCTGTTTACTTCGATGTCTTTTTCTGTTTTTCTTTCATCCGAGTGTATGTGTTTGCGTTAGAGAGGCTAGGAAATTATTCGTATGGAAGAACATTATGCTTGGTTTGTGCAGGTAAACACTGGAATAATGCTTGATTTTTGTAGAATTCATTCCGTTGGTACCTAACTTTCATGGAAACATTAACTACACTTTGGTAGAATTTGTATTACTTTGTATTCTAAAATTTATAACAATTTAGTTCTTTAAATTTTGTGACAATTTAATCACAGCCATTAAAAATATCGTCAAATTTTTACCAGGTACATTTTATTCATAGCTAAACACATTTTGTTCTTAATCAATTTATCGATCTACTACATAAGAAATTTCATTGAATCTTATCAATGTACGGAAATTAAATCGTTACAAATTAAAGTTTAAAAACTAAATTACTACTTTTATGAAAGTTTAGTTGTAGTTCAATGATTTGCATTGGATCGCCTCGCTGTTAAGACTATATTTCTTTGTCTTACTTCTCTGAAGGGATTGAACTGAAGTTACAGGGTAGCCTTTTCAATATGTGTATTTATTTTATTTGGAGCTCAATTATGGCCATCTTATATAGTGGAAATTACAAAGTTTCAACTCTAGATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCAAATCCTCTGGTATTGTCTTTTCTGGCTATGGTTTTTGCAAAATTGCATCAGGTAATTGGTTTTTAGTCAACTAGATTATTCTACCACGACAAGAGCATCACGCTTGGGAGTCTCATTGGTATCTCTAGCATTCTGGAGGTAACACGAAGATCAACAAAAGGAAACAAGGTGGAAACATTTGAAGACAAAAAGGAGTACAAATCCAAGCCGTGATTGTTCTCTTTATTTTTATGCATTAAACTTCGCCATGATGCTGTGAGCTTGAGCAGCTCTCCTTCACTTGAGCAATCTCTTGAAACAGAAAGGAGAGCGACAAGAAATCAAAGAATTCACAACCCGAGAATGAACGGACCCAACAACTACTCGCGCTATTCGTCCTGCTTCTCAAACAAACTCTTTGTTTTCCAATGATCAAGTAGCTCCAGTGTTGTTTGAACCGGTTGCCGAAGAGAACCAGAAGATCAGATGGAGAACATGTTCAGGATGGTAACACTCAAGCGATTCCTCTACTATTCATGTTTATATTGCCAACTGTTTAAATGATTCTTTCTTTGATTCATACAGTAACGTTTGAATGCAACTTTTTCTTCATGAAAAAGTGATGCAAGTCAAAAGTTAAATTCTCATTTGTATCATTCTACCATTTGATTTGTAGGAGATTTACTTATCATTATCATCATTCAGCGATCGTGTTTGGGGCAGACAAATCGAGGCATTCGTCGTTGCTGCAACATTCAGTCTGTTTACTGCCAAGTTAGTGAACTACATTTGATTGAATCCATAAAATCTTAACTATTAACCATGGCTAATCGTTTCGTATCTGTTAGTATATGATAGAAGAAAAAACTTCAAATGACCGTATAGATTTGCTATCTTTGCTAGTTTAGCGGCTTGAGAAACTGTTGTAAATAACTGACAATGATAGAGAAAAAAAAATGATAATTATACTCCGGGCAAACGAACCTTCTCATATGTTTGCCCACATCGCACAGCACGGCCTTTGCATACTTTAGATTTGTGGCCAGCCTCAGTACATCCAAATATAGATGCTCTATAGGTGAAGTAAAAATTATATACCCAGATGGAAAAACATCTGAGGTTGCCATATCAGCTGGATTATCCATCTGGTAAGGCCTTTTTTAAGACTTAACACATGTCCCTGAATTTTGTTCACTCAACTTCCCAAATAGGATAGATAAGCTCTTCAAGCTGCTGTTTTCTTCATTGAAATTTGACGTTGTCAACCCCTTCAGCTTCAAGGGGGAAATCTCTTGGTCTACCTTGTCATGACTCTTCACCTCAGCAACGAGAAGCTGGGTGATGCTGCCTCTGCAAAAGGGGCAAACAGGGGCTGTTGGACAAGCTGTAGTTGGATTAGGCTTCTTATGGCAGCATAAAGATAATGTGCAATGGGCGCACATTCTATGGCCACATGGTTGAGCCTCAATATTGCATATCTGTTCAAAGCATATGCTGCACAACTCTGTATCGCTAGCCTGTTCGTATGATAGAATCAACGAGTGATGTAAGAATGTTGCGGACACAGTTATGAGCTATAGTCTCGACCAAATTAATTACAGAAATGGAAATATAAGCAACAGAGCAGTATCCCAAGAAGTAAAACTAGAACATTGAGAGGGAATATGTAAGATCCCACCTCGGTTGTTGAGGGGAACGGAGCATTTCTTATAAATGGTGGAAACCTCTCCCTAACGGATGAGTTTTAAGACCTTGAGGGGAAGCCCAGAAGGAAAAGTTGAAAGAGGACAATATCTCCTATAGGTGGGTTTAGGCTATTACAAATAGTATAAGAGCCAAGCATAGAGCGGTGTGCAAGCGGGGACGCTCGTCTCCGAAGGGATGGATTGTGAGATTCCACATCGGTTCGAGAGGAAAATAAAGCACTCCTTATAAGGGTGTGGAAACTTATCCCTAACGGATGCTTACAACCTTAAGAGGAAGCACGGAAGGGAAAGTCCAAAGAGGACAATATCTATTCGCAGTGAACTGTTACAAAATCTTTTTCAGATTCATTGCATTCATGTATTGACACCGACTTGAAATTATTCAACAAAAAACCCAAAATGAAGTGTGTTTGAATTACCTCAGATGCTAAATCATTGTCTAAATCAGAATCAATGTCCAAATCAGATTGGAAAGGACAAGGAGGTGTGACGAATGTTTCCTTAAATATGGCCTTCTCTCTCTCCATGTTTGCATCCATCAAGGCCTTTTCTAGCAAAACTTTTGCATCTGGATGTAGCTCAATGATTAACTTCAAAGGTGAAGGCCAGACGAGAGGTTCTGGTGATGAAGGGTTCAACAAAGCTGCACAAGCTTGATGCTTATGCTTTAAAGCAACCGTAAATGGTATCCTCCTGCAAATGGTCAAGCAGATACCTTGAGAAAACTTCATTAGGAGTTCCATTGTTTACTTCTAAATTGTGCCTGTTTTAAGCAAAGCATGAGATAACTCTAGTTTTTTTTTTTTTTCAGCTTACCCATACGAGTCGAACTGAAATCTGTCAGCTCCCCAAGCCAGCAATTCTCGAACACATTCCAAGGAACCACCACGAGCAGCTAAATGGAGTGGCGAACTACCTGGACAACTGCATAACATATTCACAATAA

mRNA sequence

ATGCCTTGTTTTTTAAGTAAGAGTACGAAATTATTCTCCCACGTCCTTTCCCTCCACCAGCTCCCGTCTGTTTCATTGAAAGTAGCTTCATTCCTTCACAGTTCAAATGAGCGTGATCTTGCAAGGCCAATGCCAATGGCGTCGTTTGAAAGCCATGTGATGCATATTGCAAGACCGATCGAAGATGGATGGCCGGGCTTACGGCTAATGAACGCCAGAGTTGGATTGGCGGGAAATCATCATGATCTCTCTGCTTTGTTTTCTTTCAATACTTTGCGAACTCATTCTCCTAGCTCCTTCACCGAGTCTTCCTCAGATCTTGATACAGAGTCAACTAGATTATTCTACCACGACAAGAGCATCACGCTTGGGAGTCTCATTGGTATCTCTAGCATTCTGGAGGTAACACGAAGATCAACAAAAGGAAACAAGCTCCAGTGTTGTTTGAACCGGTTGCCGAAGAGAACCAGAAGATCAGATGGAGAACATGTTCAGGATGGTAACACTCAAGCGATTCCTCTACTATTCATGTTTATATTGCCAACTCGATCGTGTTTGGGGCAGACAAATCGAGGCATTCGTCGTTGCTGCAACATTCAGTCTGTTTACTGCCAACTTACCCATACGAGTCGAACTGAAATCTGTCAGCTCCCCAAGCCAGCAATTCTCGAACACATTCCAAGGAACCACCACGAGCAGCTAAATGGAGTGGCGAACTACCTGGACAACTGCATAACATATTCACAATAA

Coding sequence (CDS)

ATGCCTTGTTTTTTAAGTAAGAGTACGAAATTATTCTCCCACGTCCTTTCCCTCCACCAGCTCCCGTCTGTTTCATTGAAAGTAGCTTCATTCCTTCACAGTTCAAATGAGCGTGATCTTGCAAGGCCAATGCCAATGGCGTCGTTTGAAAGCCATGTGATGCATATTGCAAGACCGATCGAAGATGGATGGCCGGGCTTACGGCTAATGAACGCCAGAGTTGGATTGGCGGGAAATCATCATGATCTCTCTGCTTTGTTTTCTTTCAATACTTTGCGAACTCATTCTCCTAGCTCCTTCACCGAGTCTTCCTCAGATCTTGATACAGAGTCAACTAGATTATTCTACCACGACAAGAGCATCACGCTTGGGAGTCTCATTGGTATCTCTAGCATTCTGGAGGTAACACGAAGATCAACAAAAGGAAACAAGCTCCAGTGTTGTTTGAACCGGTTGCCGAAGAGAACCAGAAGATCAGATGGAGAACATGTTCAGGATGGTAACACTCAAGCGATTCCTCTACTATTCATGTTTATATTGCCAACTCGATCGTGTTTGGGGCAGACAAATCGAGGCATTCGTCGTTGCTGCAACATTCAGTCTGTTTACTGCCAACTTACCCATACGAGTCGAACTGAAATCTGTCAGCTCCCCAAGCCAGCAATTCTCGAACACATTCCAAGGAACCACCACGAGCAGCTAAATGGAGTGGCGAACTACCTGGACAACTGCATAACATATTCACAATAA

Protein sequence

MPCFLSKSTKLFSHVLSLHQLPSVSLKVASFLHSSNERDLARPMPMASFESHVMHIARPIEDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDKSITLGSLIGISSILEVTRRSTKGNKLQCCLNRLPKRTRRSDGEHVQDGNTQAIPLLFMFILPTRSCLGQTNRGIRRCCNIQSVYCQLTHTSRTEICQLPKPAILEHIPRNHHEQLNGVANYLDNCITYSQ
Homology
[Close]
BLAST of CmaCh06G003010 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-04
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 96  SPSSFTESSSDLDTESTRLFYHDKSITLGSLIGIS 131
           SP+  + SSSDLDTEST  F+HD+SITLG+L+G S
Sbjct: 9   SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

[Close]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1I8Y9 (uncharacterized protein LOC111470251 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470251 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 98/147 (66.67%), Postives = 103/147 (70.07%), Query Frame = 0 

Query: 61  EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDKS 120
           EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE          
Sbjct: 5   EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE---------- 64

Query: 121 ITLGSLIGISSILEVTRRSTKGNKLQCCLNRLPKRTRRSDGEHVQDGNTQAIPLLFMFIL 180
                                   LQCCLNRLPKRTRRSDGEHVQDG+      L + I+
Sbjct: 65  ------------------------LQCCLNRLPKRTRRSDGEHVQDGD------LLIIII 111

Query: 181 PTRSCLGQTNRGIRRCCNIQSVYCQLT 208
             RSCLGQTNRGIRRCCNIQSVYCQ++
Sbjct: 125 IQRSCLGQTNRGIRRCCNIQSVYCQVS 111

[Close]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1I2C4 (uncharacterized protein LOC111470251 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470251 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.6e-42
Identity = 97/147 (65.99%), Postives = 101/147 (68.71%), Query Frame = 0 

Query: 61  EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDKS 120
           EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE          
Sbjct: 5   EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE---------- 64

Query: 121 ITLGSLIGISSILEVTRRSTKGNKLQCCLNRLPKRTRRSDGEHVQDGNTQAIPLLFMFIL 180
                                   LQCCLNRLPKRTRRSDGEHVQD        L + I+
Sbjct: 65  ------------------------LQCCLNRLPKRTRRSDGEHVQDD-------LLIIII 110

Query: 181 PTRSCLGQTNRGIRRCCNIQSVYCQLT 208
             RSCLGQTNRGIRRCCNIQSVYCQ++
Sbjct: 125 IQRSCLGQTNRGIRRCCNIQSVYCQVS 110

[Close]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1CUV3 (uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMNARVGLAGN  DLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 5   EDGWPLGLRLMNARVGLAGN-RDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 64

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SSILE++RRSTKGNK++
Sbjct: 65  SITLGSLIGVSSILELSRRSTKGNKVE 90

[Close]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1J7U0 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111482141 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-29
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMN RVGLAGN HDLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 11  EDGWPLGLRLMNTRVGLAGN-HDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 70

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SS+LE++RRSTKGN+++
Sbjct: 71  SITLGSLIGVSSLLELSRRSTKGNRVE 96

[Close]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1F3R7 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111441894 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-28
Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMN RVGLA N HDLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 11  EDGWPLGLRLMNTRVGLARN-HDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 70

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SS+LE++RRSTKGN+++
Sbjct: 71  SITLGSLIGVSSLLELSRRSTKGNRVE 96

[Close]
BLAST of CmaCh06G003010 vs. NCBI nr
Match: XP_022971574.1 (uncharacterized protein LOC111470251 isoform X1 [Cucurbita maxima] >XP_022971576.1 uncharacterized protein LOC111470251 isoform X1 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 8.6e-43
Identity = 98/147 (66.67%), Postives = 103/147 (70.07%), Query Frame = 0 

Query: 61  EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDKS 120
           EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE          
Sbjct: 5   EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE---------- 64

Query: 121 ITLGSLIGISSILEVTRRSTKGNKLQCCLNRLPKRTRRSDGEHVQDGNTQAIPLLFMFIL 180
                                   LQCCLNRLPKRTRRSDGEHVQDG+      L + I+
Sbjct: 65  ------------------------LQCCLNRLPKRTRRSDGEHVQDGD------LLIIII 111

Query: 181 PTRSCLGQTNRGIRRCCNIQSVYCQLT 208
             RSCLGQTNRGIRRCCNIQSVYCQ++
Sbjct: 125 IQRSCLGQTNRGIRRCCNIQSVYCQVS 111

[Close]
BLAST of CmaCh06G003010 vs. NCBI nr
Match: XP_022971577.1 (uncharacterized protein LOC111470251 isoform X2 [Cucurbita maxima])

HSP 1 Score: 181.4 bits (459), Expect = 9.5e-42
Identity = 97/147 (65.99%), Postives = 101/147 (68.71%), Query Frame = 0 

Query: 61  EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDKS 120
           EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE          
Sbjct: 5   EDGWPGLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTE---------- 64

Query: 121 ITLGSLIGISSILEVTRRSTKGNKLQCCLNRLPKRTRRSDGEHVQDGNTQAIPLLFMFIL 180
                                   LQCCLNRLPKRTRRSDGEHVQD        L + I+
Sbjct: 65  ------------------------LQCCLNRLPKRTRRSDGEHVQDD-------LLIIII 110

Query: 181 PTRSCLGQTNRGIRRCCNIQSVYCQLT 208
             RSCLGQTNRGIRRCCNIQSVYCQ++
Sbjct: 125 IQRSCLGQTNRGIRRCCNIQSVYCQVS 110

[Close]
BLAST of CmaCh06G003010 vs. NCBI nr
Match: XP_022145575.1 (uncharacterized protein LOC111014995 isoform X2 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-29
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMNARVGLAGN  DLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 5   EDGWPLGLRLMNARVGLAGN-RDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 64

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SSILE++RRSTKGNK++
Sbjct: 65  SITLGSLIGVSSILELSRRSTKGNKVE 90

[Close]
BLAST of CmaCh06G003010 vs. NCBI nr
Match: KAG7017299.1 (hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.3 bits (347), Expect = 9.2e-29
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMN RVGLAGN HDLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 11  EDGWPLGLRLMNTRVGLAGN-HDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 70

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SS+LE++RRSTKGN+++
Sbjct: 71  SITLGSLIGVSSLLELSRRSTKGNRVE 96

[Close]
BLAST of CmaCh06G003010 vs. NCBI nr
Match: XP_022983579.1 (uncharacterized protein At3g17950-like [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 9.2e-29
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVGLAGNHHDLSALFSFNTLRTHSPSSFTESSSDLDTESTRLFYHDK 120
           EDGWP GLRLMN RVGLAGN HDLSA  SFNTLRTHSPSSFT+SSSDLDTEST  FYHDK
Sbjct: 11  EDGWPLGLRLMNTRVGLAGN-HDLSASVSFNTLRTHSPSSFTDSSSDLDTESTGSFYHDK 70

Query: 121 SITLGSLIGISSILEVTRRSTKGNKLQ 147
           SITLGSLIG+SS+LE++RRSTKGN+++
Sbjct: 71  SITLGSLIGVSSLLELSRRSTKGNRVE 96

[Close]
BLAST of CmaCh06G003010 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 7.5e-13
Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 61  EDGWP-GLRLMNARVG--LAGNHHD------LSALFSFNTLRTHSPSSFTESSSDLDTES 120
           E+GWP GLR +NAR+G    G HH        +   SF++L + SPSS  +SSSDLD++S
Sbjct: 5   EEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSPSS--QSSSDLDSQS 64

Query: 121 TRLFYHDKSITLGSLIGISSILEVTRRSTK 142
              F+ D+S TLG+LIGISS LE++RRS +
Sbjct: 65  MGSFFRDRSYTLGNLIGISSFLELSRRSNR 92

[Close]
BLAST of CmaCh06G003010 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 96  SPSSFTESSSDLDTESTRLFYHDKSITLGSLIGIS 131
           SP+  + SSSDLDTEST  F+HD+SITLG+L+G S
Sbjct: 9   SPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFS 43

The following BLAST results are available for this feature:
BLAST of CmaCh06G003010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DR246.2e-0465.71Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV... [more]
BLAST of CmaCh06G003010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I8Y94.1e-4366.67uncharacterized protein LOC111470251 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1I2C44.6e-4265.99uncharacterized protein LOC111470251 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CUV33.4e-2985.06uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1J7U04.5e-2982.76uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114821... [more]
A0A6J1F3R73.8e-2881.61uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
BLAST of CmaCh06G003010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022971574.18.6e-4366.67uncharacterized protein LOC111470251 isoform X1 [Cucurbita maxima] >XP_022971576... [more]
XP_022971577.19.5e-4265.99uncharacterized protein LOC111470251 isoform X2 [Cucurbita maxima][more]
XP_022145575.17.0e-2985.06uncharacterized protein LOC111014995 isoform X2 [Momordica charantia][more]
KAG7017299.19.2e-2982.76hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022983579.19.2e-2982.76uncharacterized protein At3g17950-like [Cucurbita maxima][more]
BLAST of CmaCh06G003010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02440.17.5e-1350.00unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac... [more]
AT3G17950.14.4e-0565.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040344Uncharacterized protein At3g17950-likePANTHERPTHR33544FAMILY NOT NAMEDcoord: 61..146
NoneNo IPR availablePANTHERPTHR33544:SF360S RIBOSOMAL PROTEIN L36coord: 61..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G003010.1CmaCh06G003010.1mRNA