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CmaCh06G002900 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGGTTTTATTTGTTCTAAAGAAAACAGAGAAAGGAAACAGAGTAAAGGAAACCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAATTTACAAACATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATATAAAAATGGAACATTCTGAATGGTGAAAGACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTGTAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAGGGAAAAACCGGCTTGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGGTGAGTCGCCGTACTGGAGGATTCCGATGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATTAATCGGAGTAGGTATGTTTTTCCAGGCTTCACTTTTAGCTTGAATGTATCTGAAAATCAAAATTTAATCATTTTTAGTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA MKNQREKRGEIREEFIQKAERTKGKPRNQHFGRSAGGGRSFWSDFGPSRTIHAILSPQLVWTSKWQCMNQTPVNQNLNTNCYLTWVIGVETEGQPAAGGNAGSVPLNRVNQIEISWILIHVEIPKTFSDYKEIISMKMERMTLCPQNTRPLPAGEIRLQNRRLRQGKRDIINSGSEFRTVGTLTRDVFRTWGSSKSDGEEKFPVDGLWDIGREFSISKRPEFPREIGDEIRVVNCREIGKLSGRSWGGGTLASEVRSSRHEETGVGEIGICFEKNIGGLAGGEQYHVRLEGLDVNGVGVDDGQRMVGDGEEKLVVECSCEINKINGGIKVITVRRGAIIKRARESINGVRIRNIRRSSGLQRLLNHTLRLHIEPLTENDWGFSVGLLERI Homology
BLAST of CmaCh06G002900 vs. ExPASy TrEMBL
Match: A0A5A7PQL4 ((Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB OS=Striga asiatica OX=4170 GN=STAS_11425 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13 Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 0
BLAST of CmaCh06G002900 vs. ExPASy TrEMBL
Match: A0A151QWA8 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_044381 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.5e-07 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CmaCh06G002900 vs. ExPASy TrEMBL
Match: A0A5A7QP95 (Recombinase activating protein 1 OS=Striga asiatica OX=4170 GN=STAS_24325 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-06 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of CmaCh06G002900 vs. ExPASy TrEMBL
Match: A0A444FRM1 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00010437 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-05 Identity = 78/299 (26.09%), Postives = 121/299 (40.47%), Query Frame = 0
BLAST of CmaCh06G002900 vs. ExPASy TrEMBL
Match: A0A7J0GJJ4 (Laccase 17 OS=Actinidia rufa OX=165716 GN=Acr_22g0003740 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-05 Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CmaCh06G002900 vs. NCBI nr
Match: KAG7027945.1 (hypothetical protein SDJN02_09124 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-20 Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CmaCh06G002900 vs. NCBI nr
Match: GER35163.1 ((Dimethylallyl)adenosine tRNAmethylthiotransferase MiaB [Striga asiatica]) HSP 1 Score: 87.8 bits (216), Expect = 2.2e-13 Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 0
BLAST of CmaCh06G002900 vs. NCBI nr
Match: KYP34648.1 (hypothetical protein KK1_044381, partial [Cajanus cajan]) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-06 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of CmaCh06G002900 vs. NCBI nr
Match: GER47235.1 (recombinase activating protein 1 [Striga asiatica]) HSP 1 Score: 64.3 bits (155), Expect = 2.6e-06 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of CmaCh06G002900 vs. NCBI nr
Match: RWW56383.1 (hypothetical protein BHE74_00036930 [Ensete ventricosum]) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-05 Identity = 78/299 (26.09%), Postives = 121/299 (40.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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