CmaCh06G002780 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSPSKSASSTATQILVATGVQSPLRPLAPRRVAA Homology
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26 Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18 Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match: A0A6J1AT90 (uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC110420657 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match: A0A061EYS9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021870 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.4e-18 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of CmaCh06G002780 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38 Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of CmaCh06G002780 vs. NCBI nr
Match: KAG7027938.1 (hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.8 bits (421), Expect = 8.8e-38 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of CmaCh06G002780 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-28 Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of CmaCh06G002780 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27 Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of CmaCh06G002780 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 1.6e-26 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|