CmaCh06G002390 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G002390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
LocationCma_Chr06: 1212536 .. 1217269 (+)
RNA-Seq ExpressionCmaCh06G002390
SyntenyCmaCh06G002390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGTTTCGGAGCATGTATTTTCCTGACCATTTTTGTGTTCAATGTCAATTGTACACCCTCACTTTATTTGCGCAAACATGTTGTCACGTCGACCACTCATTTATCTTTTTCTCATAAGGTTCCTCCATCTGTAGCATTGTTGATGTCTTATATAACAGGAAATTTGATGTCGGGATGAATGAAAAGATGGATGGATGGAATCCTATGCCTCCAATTACAGATGGTATTAAATTTTAGTAACTCTGAATTAGTAATAGTTTGATATGAGAAAGTTTCTTGAGAAGGATTATTAACATGAGTTATGATTGGGAACACATTCACCGTTGGGCATTAGACATCTTAATGCGTTGCAATTTGGACATGGATCGATCTTTATGCTTTCCAGCAGCTATACAATCTGAATTGGCTACCACTATAGAGACCACTCCAATTCTTGAGACTGGAGAGGGGTACCCCGAGTACTGGGCCAATTTCTTTGTCGGTTGGAGACTTTAATGCGTTGTAATCTGGACATTGATCGATCTTTATGCCTCCCGGTAGCTATACAATCCGAATCGGCTACCACTATTGAGACTAGGGAGGGGCACCTTGAGTGCTGGGCCAATTTCTGTGTTGGTTGGAGACCTTAATGCGTTGCAATCTAGACATTGATTGATTTTTGTGCTTCCCAGCAACTATACAATATGAATTGGCTACCACAATGGAGACCGCTTGAGTTCATGAGACTGGGGAGGGGCACCCCTAGTGCTAGACCAATCTCTGTGTCGGTTGGAGACTTTAATGCGTTGCAATTTGGACATTGATCGATTTTTATGCTTCCCAGCAGCTATACAATCCAAATCGATTACCACACTATAGAGATTGCTTGAATTCTTGAGACTGAGGAGGGCCACCTTAATGCTGGGTCAATTTCTGTATCGGTTGGAGATCAGGTTCGAGATGATATCATATGGTCCAAAGGGGTTGGGATTTAGAGAGAATTTACAATTAATTAAAAGAGATTTATCAAAATTTAAAATTTAAAGAATTAAGGAGGGAGAAAACGATCCAATAATCGCTTAACAATGGCGGCAAGCCGGCACAAAATTATTGTACAGAAGATTTGACAACTTGTTTCGGACATAGCCATGCATCTCTACTGTAAGAGTGTCTTCCCTTGATTTTTTTTTTTTGTCTCTGCTTTTGCTTTCCGTTGCTGTGTGAGCACATTCCGGCTCTGTAGCTCTAATTCATTCTATTATCCCTATCGAATTCGATGCATTTATGTTTAAACCGGTTGTTCAAACAATTATTCAGAGTTTCTAGAGCTCCTTGTAAGGCTGAGTGGAAAACCGGTTGCCTTACTTGATTCCAATTTGAAGTTGAGTTGTAATTCATTGGCGATTGGTTGAGTTGTAACTATTAGCTTGCTTGTGTAGTCGGTTGTTGATAATTTTACAAGTTGTCCCTTGAAGTTGACATCAGATATGACAGCAACAATATTAGTTCTATGAGTTAGAGAATTGTTTCTGGCTGCGTCCAATTGAATTTAAGCAGTTGTCGGTGGAGAGTTGTGGAAGTTCTGTATGTCACAGAGAGCGTAAGATGCTCGACGAAATGCCTGATCAAGACTTTTCTATCTCTACGCTGTTCATGTAAAGGTTTTACTGTTCGTGCTTGATGTGGTACTCTGAGGTGAAGATTCTAGAGCTAGTTCTTGGAGTTGCTTATGAGAACACCGCTTGACATGTTCTAGCCTCGAACTTTTAACTGTTCAAGGATATTTATGCTCTATTTCAATTTTGAGCATGAATGTGGAAACCTCTTGTTGTTATTGGAAATTAGGAATTTGAAGCTCCAATTGGGTTGTTGCTGTAAGGCTTGGTGACCTGCTGTAACTTTCTTGATCCTTCAGTCATGGGCCAAGCTTCAAGAGATAAGAGGGTCTTGACTACAATTCTATTCGGCTATTTGTCCTTTTGGTTCGTTACCTTTTTCCACGTTTTATTATTTACTTTGTCTCGTTTGCAGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAAAATAGATGAAGAATTAACATATTTGAAGGTTTGTTCTTGTGTTGGGCTCCTCTCTCTTAAAATATTTTTACCTTTCTGCTAGGATGTCAATCACTGAGATGGTCCAGATGAATGGTAATTGGTACTAAATATTCCTTTCCAAGAATACTAATTTCCTTTGTTTTTTAGGAGTTCTATGTCCTGGAGATGTCATTATTCCCTCGTGAACAATGCCGCAATATTTTGGATTAACCTTCCATAACAGAATAGTAGCTGGAGCCCCTGGTAGCTGGAGCTAGGTAATCTCTTTTGGGTGTCTTCTTGTTGCAATCTGTTCATCAAACTAGTGGACAATGCTTTATGGGGGAAATACAATTTTTCATATAAAATACAACTAATTCTTACAAGAATTCTGCAATATGAATCTCTCTTCTCATCTAGTTTCTTTTTTTCTTAGTCAGTCAAGTTGAAAGGTTTGCTGTGATCTCCTCTGTTCCTTGAGATTATTGCTTTGACGTGTAGATTATTTTTGACATGTTTAGCATTGGTAAAACTTGTCAAGTATTATAATGAATTGCGTGAGGACCATAATCAAAGCTAGGTCTCTGTTGTTTTACATTTTCGAGTTTTTTTTTTTTTTTTTTTTGTTGCAGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAGACCGAAAGGCAGTCGCAATTCCAGTATAGGTAACCTTTTGGCTTCACTTTTTTTATTGGTAACTCTAAAGGTCTATCTTTCGGTTATAATTGAACTTATTTCCTGAAAATAATACCCTTCTAAGTGAAAATTGTCATTATAGCGTCTGGTTCATAGGATTCTTACGCATGGATTTCAGATCCCATTGAACTTTAGATTGTTATCGTTTAATACTATGTGGGACTCGTGTCCACCCAACACCAAATTGTGGGGTTTGCTTATGTTCGTGGTGGCATCTGTAATATAAAAAAAAAAAACATGTAAAAGAGGACAAGATAGTCAAAAGGCAGCTCACATATTTTCTAAAACTTCGATGGTTATGTTTATGGACATTAAAAAGTTTTGAATTACAACCGTGAATTGTTCTATTTGATTCTAGGTAGTCGGTCGTTTAATACAATTGCTCAAATGTTGACGTGTCAGGCTGATTAAACTATAACTAGTTACAACTTACAAGTGATTATTTGGCATCATTTAACTTTTAAACAAAGTAGTGACTATGATTTAACTTTATGTTCATGTTGAAGCCCATACGTGGACTGGGTGTGAATGTTGAGGCATTTGTAGTTTGTGAGAATTATTCGCCTCCTGAGGGTTTCAACCCATAAGATCCAACCCCTGCTAGAAAAGGTGGGAAGCCCATCAGGAGGAGATGACTTAGGTAAACTCGATGTACGACCTTGATTGGGAGTTCACATATCGAAGGACGTGATACAACATGTTCTTGTTCTTTAAAGATTAATATGTTTTACAGCTGGCTATGACCATGTCTTCTTGTCTTTAAACTTCATATAATTAGTGTCTCTGATTTCAATGTGATCAATTCCCTGATATTTTTGGTTACACAAGAGGAAGTAATAGCATTGCTATTTTGCTGCATTGTGTCCCTCTCAGATTGCAGTAGTGGGTGGCTGGGAGGACCCAATAAAGTATCCCCTCAGCGGATATGATTCCGATCGTTCATACCCACTGCCCAGAGGTGCCGAGGGAACTTTGATCCTGTGCAACCTCCTAGTGCCCCTCCTTACAACAGGGCTCTTGAAATGAAGAAGACCTTCCAGTGAAGGAATTCGAGAACTGAACCTTCCTTGGATTCCGGATTGTGCTATTCAATGTTAGATAACCTGCAAAGTTGATTTGGGATGGACCGGTAATTATTAAGAAACAGCAATCATTTCTCCCTCCCCCCCTCTCAGTCTCTGTCCTATTTTTGTAAAAAAAAAAAAGAAATGCTGTGGATCTTGATTTGGATTATTTTAACTGAAATACATAAAGATTAAGATGTATTGTGATAAGCACGAGATTATCCCGCACGAGTCTTAATCATCCTTCATAATTTCCATGGACATGAACCCCACCCCCATGCATACCTCAAACAAAAACAAGAAAGGAAAATCATTTTGAGCATTACACATTTTCTAAGGGCATTTTACTGCATGTCGGTCTGCATGTTTCTATGTTTTTCATATGCAAATGTTTGGACAAACTGGGGTTTTACAGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCAAAATTCACAGGTCTAACTCATCCCTTTCTAACTGTTGCCTTCTAAAAATTTATGACCCGACATATCACGCATAGAGATTCTTGTTGTCTATCCCATTCCCTCCTTTTGGAGATGCCATAATTTAGGCGTTTAATGGTGGACATCATTGAACAAAAATAACTCAGTGAAATAAACTTATATGTTCATTTTTTTTTTTTTTACCTCATCGAGTGATATATTGTAGATATCCAATTTATGTAATTTTATAATGAACAGATATCTGCTCGAGCTCAAGGCATTTAGACAAGAAAAGTTTCGAGCTTCGAAGACTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA

mRNA sequence

ATGGCTAGTTTCGGAGCATGTATTTTCCTGACCATTTTTGTGTTCAATGTCAATTGTACACCCTCACTTTATTTGCGCAAACATGTTGTCACGTCGACCACTCATTTATCTTTTTCTCATAAGTTGTCGGTGGAGAGTTGTGGAAGTTCTGTATGTCACAGAGAGCGCTTGGTGACCTGCTGTAACTTTCTTGATCCTTCAGTCATGGGCCAAGCTTCAAGAGATAAGAGGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAAAATAGATGAAGAATTAACATATTTGAAGGAGTTCTATCTGGAGCTAGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAGACCGAAAGGCAGTCGCAATTCCAGTATAGATTGCAGTAGTGGGTGGCTGGGAGGACCCAATAAATTGATTTGGGATGGACCGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCAAAATTCACAGATATCTGCTCGAGCTCAAGGCATTTAGACAAGAAAAGTTTCGAGCTTCGAAGACTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA

Coding sequence (CDS)

ATGGCTAGTTTCGGAGCATGTATTTTCCTGACCATTTTTGTGTTCAATGTCAATTGTACACCCTCACTTTATTTGCGCAAACATGTTGTCACGTCGACCACTCATTTATCTTTTTCTCATAAGTTGTCGGTGGAGAGTTGTGGAAGTTCTGTATGTCACAGAGAGCGCTTGGTGACCTGCTGTAACTTTCTTGATCCTTCAGTCATGGGCCAAGCTTCAAGAGATAAGAGGAATATATACTATAGTAAAGCAAAAGAAGAAGGCTGGCGTGCTCGAAGTGCGTTCAAACTTCTGAAAATAGATGAAGAATTAACATATTTGAAGGAGTTCTATCTGGAGCTAGCTGAAGTTGCTTTTCCCGTAGTGACTTTTGCAAGACCGAAAGGCAGTCGCAATTCCAGTATAGATTGCAGTAGTGGGTGGCTGGGAGGACCCAATAAATTGATTTGGGATGGACCGGTGGCCCCCCTGATTGTGAATCAACCAACCATCCTTGCTAATGGGAATCTGAGCTATTCAAAGGCGTGGCCCTCAAAATTCACAGATATCTGCTCGAGCTCAAGGCATTTAGACAAGAAAAGTTTCGAGCTTCGAAGACTGAAACTCGATTATCATCTGCTACAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAA

Protein sequence

MASFGACIFLTIFVFNVNCTPSLYLRKHVVTSTTHLSFSHKLSVESCGSSVCHRERLVTCCNFLDPSVMGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLKEFYLELAEVAFPVVTFARPKGSRNSSIDCSSGWLGGPNKLIWDGPVAPLIVNQPTILANGNLSYSKAWPSKFTDICSSSRHLDKKSFELRRLKLDYHLLQHHLTETGTQKNV
Homology
[Close]
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match: Q54VA8 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=fsjA PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG++S+DKR+IYY KAKEEGWRARSAFKL++IDEE
Sbjct: 1   MGKSSKDKRDIYYRKAKEEGWRARSAFKLIQIDEE 35

[Close]
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match: Q9VEP1 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 OS=Drosophila melanogaster OX=7227 GN=CG5220 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDE 103
           MG+ S+DKR+IYY +AK+EGWRARSAFKLL +DE
Sbjct: 1   MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDE 34

[Close]
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match: Q22031 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=R74.7 PE=3 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLK 109
           MG+ SRDKR+IYY  AKE  WRARSAFKL++ID+E   LK
Sbjct: 1   MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILK 40

[Close]
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match: Q9UET6 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens OX=9606 GN=FTSJ1 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-07
Identity = 24/35 (68.57%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG+ S+DKR++YY  AKE GWRARSAFKLL++D+E
Sbjct: 1   MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKE 35

[Close]
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match: P38238 (tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRM7 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-07
Identity = 23/41 (56.10%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLKE 110
           MG++S+DKR++YY KAKE+G+RARSAFKLL+++++  +L +
Sbjct: 1   MGKSSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDD 41

[Close]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match: A0A6S7PR47 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS37361 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-08
Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 31  TSTTHLSFSHKLSVESCGSSVCHRERLVTCCNFLDPSVMGQASRDKRNIYYSKAKEEGWR 90
           TS + L    +L       SV H     T  ++    +MG+ASRDKR+IYY KAKEEGWR
Sbjct: 28  TSASSLRSCRRLQRSPISWSVAH-----TTLHYKQVQIMGKASRDKRDIYYRKAKEEGWR 87

Query: 91  ARSAFKLLKIDEE 104
           ARSAFKLL+IDEE
Sbjct: 88  ARSAFKLLQIDEE 95

[Close]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match: A0A6J1GES5 (putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453504 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-08
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG+ASRDKRNIYYSKAKEEGWRARSAFKLL IDEE
Sbjct: 1   MGKASRDKRNIYYSKAKEEGWRARSAFKLLNIDEE 35

[Close]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match: A0A2P2KBS6 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLKE 110
           MG+ASRDKR+IYY KAKEEGWRARSAFKLL+IDEE    +E
Sbjct: 1   MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEE 41

[Close]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match: A0A1J3HHG8 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Noccaea caerulescens OX=107243 GN=LC_TR7434_c10_g1_i1_g.26276 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.5e-08
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLK 109
           MG+ASRDKR+IYY KAKEEGWRARSAFKLL+IDEE    K
Sbjct: 1   MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFK 40

[Close]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match: A0A6D2L592 (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS49048 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.5e-08
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLK 109
           MG+ASRDKR+IYY KAKEEGWRARSAFKLL+IDEE    K
Sbjct: 1   MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFK 40

[Close]
BLAST of CmaCh06G002390 vs. NCBI nr
Match: KAG6596355.1 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.1 bits (562), Expect = 9.5e-54
Identity = 120/159 (75.47%), Postives = 124/159 (77.99%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLK------EFYLELAEVAFPVV 128
           MG+ASRDKRNIYYSKAKEEGWRARSAFKLL IDEE    +            AEVAFPVV
Sbjct: 1   MGKASRDKRNIYYSKAKEEGWRARSAFKLLNIDEEFNIFEGVKRVVNLCAAPAEVAFPVV 60

Query: 129 TFARPKGSRNSSI-DCSSGWLGGPNKLIWDGPVAPLIVNQPTILANGNLSYSKAWPSKFT 188
           TFA+PKGSRNSSI    +G   GP          PLIVNQPTILANGNLSYSKAWPSKFT
Sbjct: 61  TFAKPKGSRNSSIAHTRTGCECGP----------PLIVNQPTILANGNLSYSKAWPSKFT 120

Query: 189 DICSSSRHLDKKSFELRRLKLDYHLLQHHLTETGTQKNV 221
           DICSSSRHLDKK FELRRLKLDYHLLQHHLTETGTQKNV
Sbjct: 121 DICSSSRHLDKKGFELRRLKLDYHLLQHHLTETGTQKNV 149

[Close]
BLAST of CmaCh06G002390 vs. NCBI nr
Match: KAG7027905.1 (Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-17
Identity = 53/74 (71.62%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEELTYLK------EFYLELAEVAFPVV 128
           MG+ASRDKRNIYYSKAKEEGWRARSAFKLL IDEE    +            AEVAFPVV
Sbjct: 1   MGKASRDKRNIYYSKAKEEGWRARSAFKLLNIDEEFNIFEGVKRVVNLCAAPAEVAFPVV 60

Query: 129 TFARPKGSRNSSID 137
           TFA+PKGSRNSSI+
Sbjct: 61  TFAKPKGSRNSSIE 74

[Close]
BLAST of CmaCh06G002390 vs. NCBI nr
Match: KAG6580486.1 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-09
Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 0 

Query: 48  GSSVCHRERLVTCCNFLDPSVMGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           G S  H ++L+     LD S+MG+ASRDKR+IYY KAKEEGWRARSAFKLL+ID+E
Sbjct: 5   GLSSQHYQKLL-----LDSSIMGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDDE 55

[Close]
BLAST of CmaCh06G002390 vs. NCBI nr
Match: CAB4110513.1 (unnamed protein product [Lactuca saligna])

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-08
Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 31  TSTTHLSFSHKLSVESCGSSVCHRERLVTCCNFLDPSVMGQASRDKRNIYYSKAKEEGWR 90
           TS + L    +L       SV H     T  ++    +MG+ASRDKR+IYY KAKEEGWR
Sbjct: 28  TSASSLRSCRRLQRSPISWSVAH-----TTLHYKQVQIMGKASRDKRDIYYRKAKEEGWR 87

Query: 91  ARSAFKLLKIDEE 104
           ARSAFKLL+IDEE
Sbjct: 88  ARSAFKLLQIDEE 95

[Close]
BLAST of CmaCh06G002390 vs. NCBI nr
Match: XP_022950393.1 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Cucurbita moschata])

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-08
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG+ASRDKRNIYYSKAKEEGWRARSAFKLL IDEE
Sbjct: 1   MGKASRDKRNIYYSKAKEEGWRARSAFKLLNIDEE 35

[Close]
BLAST of CmaCh06G002390 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11
Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG+ASRDKR+IYY KAKEEGWRARSAFKLL+IDEE
Sbjct: 1   MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEE 35

[Close]
BLAST of CmaCh06G002390 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11
Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 69  MGQASRDKRNIYYSKAKEEGWRARSAFKLLKIDEE 104
           MG+ASRDKR+IYY KAKEEGWRARSAFKLL+IDEE
Sbjct: 1   MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEE 35

The following BLAST results are available for this feature:
BLAST of CmaCh06G002390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54VA83.3e-0980.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Dictyosteli... [more]
Q9VEP11.4e-0773.53Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 1 OS=Drosophil... [more]
Q220311.8e-0767.50Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabdi... [more]
Q9UET64.1e-0768.57Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapien... [more]
P382387.0e-0756.10tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Saccharomyces cerevi... [more]
BLAST of CmaCh06G002390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6S7PR471.0e-0853.42Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Lactuca sal... [more]
A0A6J1GES51.3e-0894.29putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Cucurbita m... [more]
A0A2P2KBS65.0e-0878.05Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Rhizophora ... [more]
A0A1J3HHG86.5e-0880.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Noccaea cae... [more]
A0A6D2L5926.5e-0880.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Microthlasp... [more]
BLAST of CmaCh06G002390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6596355.19.5e-5475.47putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, partial [Cucu... [more]
KAG7027905.11.9e-1771.62Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6580486.14.2e-0966.07putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase, partial [Cucu... [more]
CAB4110513.12.1e-0853.42unnamed protein product [Lactuca saligna][more]
XP_022950393.12.7e-0894.29putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Cucurbita mos... [more]
BLAST of CmaCh06G002390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G01230.22.8e-1188.57S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
AT5G01230.12.8e-1188.57S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10920:SF25TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATEDcoord: 69..106
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 69..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G002390.1CmaCh06G002390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0002128 tRNA nucleoside ribose methylation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0008175 tRNA methyltransferase activity