Homology
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 2.2e-67
Identity = 138/354 (38.98%), Postives = 214/354 (60.45%), Query Frame = 0
Query: 28 TAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 87
T + +DR+RD D +K+R + K L++ + +++ ++ +GL
Sbjct: 38 TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97
Query: 88 -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 147
+ G F+ K+PHVF+++ HP++R L CR+T K ++ E + D + V RL+KL
Sbjct: 98 KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157
Query: 148 LMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 207
+MMS G + + +R+ E GLP+ F S+++K+ FRL+D E +E+V+K N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217
Query: 208 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEK 267
+++ +E+ RE E+R K + DV+F+F +NFP G+KI FR + WQRLPY PYE
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277
Query: 268 RQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 327
G+ +RS +R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337
Query: 328 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 371
GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +L+L+ R K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 7.5e-39
Identity = 122/382 (31.94%), Postives = 209/382 (54.71%), Query Frame = 0
Query: 26 AVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL 85
AV AQ ++ R +++ D + + +KL+++ KLR +++ +SL+ + R+R +GL
Sbjct: 54 AVVAQAAVKRR-KEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGL 113
Query: 86 --RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKK 145
+ + + ++P VF+V + +L R+T L E ++ N+SE V +L+K
Sbjct: 114 TRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRK 173
Query: 146 LLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEI---VELV--DKHE 205
LLMMS + + I + + +LGLP FR++I ++Y FR+V ++ +EL D
Sbjct: 174 LLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPEL 233
Query: 206 NVAVAEV--EQWREREFREK-WLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAK 265
V+ AEV E+ R RE +E+ + + +KF + P G K+ G ++ ++ +PY
Sbjct: 234 AVSAAEVAEEENRAREEQERNLIIDRPLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYIS 293
Query: 266 PYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL 325
PY +RS G EK A V+HE+LSLT+EK V+ L HFR +F ++R +
Sbjct: 294 PYSDFS--HLRS--GSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGM 353
Query: 326 LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESS 385
L++HP +FY+S KG+ VFLREAY LVE + + +++ KM+ L+ + R + + ++
Sbjct: 354 LIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 413
Query: 386 MEIKEHVSAADNGDCLSKSEGS 398
E + NG SEGS
Sbjct: 414 SEEADRT----NGAAQMLSEGS 423
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.3e-38
Identity = 114/351 (32.48%), Postives = 191/351 (54.42%), Query Frame = 0
Query: 26 AVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL 85
AV AQ ++ R ++ DT+ + +KL+++ KLR +++ + +SL+ + R+R +GL
Sbjct: 48 AVVAQAAVKRR-KEAPFDTVIQRDKKLKLVLKLRNILV-AQPDRVMSLRELGRFRRDLGL 107
Query: 86 --RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKK 145
+ + + ++P VFDV + +L R+T L E + N+SE V +L+K
Sbjct: 108 TRKRRLIALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRK 167
Query: 146 LLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE---IVELVDKHENV 205
LLMMS + I + + +LGLP FR+++ ++Y FR+V ++ +EL +
Sbjct: 168 LLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPEL 227
Query: 206 AVAEVEQWREREFREKWLSEFDVKFAFPINF-----PTGYKIKGGFREKLRNWQRLPYAK 265
AV+ E E E R + E ++ P+ F P G K+ G ++ ++ +PY
Sbjct: 228 AVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYIS 287
Query: 266 PYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL 325
PY +RS G EK A V+HE+LSLTVEK V+ L HFR +F ++R +
Sbjct: 288 PYADFS--HLRS--GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGM 347
Query: 326 LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
+++HP +FY+S KG+ VFLREAY LVE N + +++ KM+ L+ + R
Sbjct: 348 IIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 6.1e-33
Identity = 101/340 (29.71%), Postives = 175/340 (51.47%), Query Frame = 0
Query: 36 RIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFV 95
R ++L D++ + +KL+++ +R++++ + +SL+ + ++R +GL R +
Sbjct: 78 RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALL 137
Query: 96 HKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTL 155
KYP VF++ +L ++T + L E + N+ E V +L+KL+MMS + +
Sbjct: 138 RKYPGVFEIVEEG-AYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197
Query: 156 HIHALRLISKELGLPDGFRESILVKYSDDFRLVDL---EIVELVDKHENVAVAEVE---- 215
+ + + +LGLP FR++I +Y FR+V +EL +AV+ E
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSED 257
Query: 216 QWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVR 275
R RE E+ L + P G + K+ ++ + Y PY + F
Sbjct: 258 DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHL 317
Query: 276 SCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYIS 335
G + + EK A V+HELLSLT EK V+ L HFR +F +R +L++HP +FY+S
Sbjct: 318 RSGTLEK-EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 377
Query: 336 TKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
KG VFLREAY L++ +P+ +V+ KM+ L+ + R
Sbjct: 378 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 1.5e-23
Identity = 96/343 (27.99%), Postives = 158/343 (46.06%), Query Frame = 0
Query: 38 RDLKLDTLATQIR--KLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHK 97
RD D + +R +L+ + L+ ++ I + R F + I F+ K
Sbjct: 33 RDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF-DVSTKIAHFLRK 92
Query: 98 YPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHI 157
+P +F+ F P R+T + L +QE V S + RLKKL++MS + L +
Sbjct: 93 FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152
Query: 158 HALRLISKELGLPDGFRESILVKYSDDFRLVDLE--IVEL-VDKHENVAVAEVEQWRERE 217
++ + LGLPD + + + FR VD+E + L VD + V V Q +
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 212
Query: 218 FREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMH 277
R +S +++ FP+ G +++ + L +Q+LPY PY+ S
Sbjct: 213 KRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS----D 272
Query: 278 RHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ 337
EKR V LHELL L VE + ++L+ ++ F + + + +HP IFY+S K T
Sbjct: 273 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 332
Query: 338 IVFLREAYAKGCLVEPNPIYIVRRKM------QDLLLLGRRHT 370
LRE Y VE +P+ VR+K +L+L RR++
Sbjct: 333 TAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368
BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match:
A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)
HSP 1 Score: 809.3 bits (2089), Expect = 7.3e-231
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR
Sbjct: 17 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 76
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 256
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match:
A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 794.3 bits (2050), Expect = 2.4e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 17 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 76
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match:
A0A6J1FCD7 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 794.3 bits (2050), Expect = 2.4e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407
BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match:
A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)
HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/400 (87.25%), Postives = 375/400 (93.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
R+ FGPFNHFCQ+RW KP V+AQTRLE R RDLKLD LATQ++K R+I KL ELM +RKR
Sbjct: 20 RIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRKR 79
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRN VG+RIGIG+F+HKYPHVFDVFPHP+RRNLCCRITGKM ALMKQEE
Sbjct: 80 GPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQEE 139
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVIND EIETVQRLKKLLMMS NGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVD
Sbjct: 140 NVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVD 199
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELV+KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTG+ I+GGFREKLRN
Sbjct: 200 LEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRN 259
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPY +PYEKRQ FG RS GG+ RHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDFA
Sbjct: 260 WQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDFA 319
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRR
Sbjct: 320 IEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRR 379
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKE+ +AADNGD LSKSEGSWVLPILQGFD
Sbjct: 380 HTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419
BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match:
A0A5A7UFE6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006380 PE=4 SV=1)
HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/400 (87.25%), Postives = 375/400 (93.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
R+ FGPFNHFCQ+RW KP V+AQTRLE R RDLKLD LATQ++K R+I KL ELM +RKR
Sbjct: 31 RIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRKR 90
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRN VG+RIGIG+F+HKYPHVFDVFPHP+RRNLCCRITGKM ALMKQEE
Sbjct: 91 GPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQEE 150
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVIND EIETVQRLKKLLMMS NGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVD
Sbjct: 151 NVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVD 210
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELV+KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTG+ I+GGFREKLRN
Sbjct: 211 LEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRN 270
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPY +PYEKRQ FG RS GG+ RHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDFA
Sbjct: 271 WQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDFA 330
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRR
Sbjct: 331 IEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRR 390
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKE+ +AADNGD LSKSEGSWVLPILQGFD
Sbjct: 391 HTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430
BLAST of CmaCh06G000410 vs. NCBI nr
Match:
XP_022971448.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima])
HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR
Sbjct: 17 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 76
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 256
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of CmaCh06G000410 vs. NCBI nr
Match:
XP_022937849.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucurbita moschata])
HSP 1 Score: 794.3 bits (2050), Expect = 5.0e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407
BLAST of CmaCh06G000410 vs. NCBI nr
Match:
XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 794.3 bits (2050), Expect = 5.0e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 17 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 76
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CmaCh06G000410 vs. NCBI nr
Match:
KAG6596183.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 791.2 bits (2042), Expect = 4.3e-225
Identity = 391/400 (97.75%), Postives = 393/400 (98.25%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPY KPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAY KGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPIYIVRRKMQDLLLLGRR 367
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407
BLAST of CmaCh06G000410 vs. NCBI nr
Match:
KAG7027720.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 789.3 bits (2037), Expect = 1.6e-224
Identity = 390/400 (97.50%), Postives = 392/400 (98.00%), Query Frame = 0
Query: 8 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLR IFKLRELMIDRKR
Sbjct: 17 RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRTIFKLRELMIDRKR 76
Query: 68 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77 GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136
Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196
Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256
Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
WQRLPY KPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316
Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
IEVNIRELLLKHPGIFYISTKGNTQIVFLREAY KGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPIYIVRRKMQDLLLLGRR 376
Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CmaCh06G000410 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 478.0 bits (1229), Expect = 7.5e-135
Identity = 232/398 (58.29%), Postives = 306/398 (76.88%), Query Frame = 0
Query: 13 PFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVS 72
P + QRRW KP +AQTRLE+R RD +LD + QIRKL II ++ +LM +KRGPFVS
Sbjct: 45 PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104
Query: 73 LQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVIND 132
LQ+MSRW+N VGL + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164
Query: 133 SEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVE 192
E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224
Query: 193 LVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRL 252
LVD+ E++ VA+VE+WRE E+REKWLS+F+ +AFPI+ PTG+KI+ GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284
Query: 253 PYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 312
PY KPY++++ G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344
Query: 313 IRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQ 372
+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL R+++
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404
Query: 373 L-----ESSMEIKEH-VSAADNGDCLSKSEGSWVLPIL 404
L E+ E K V + N D +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437
BLAST of CmaCh06G000410 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-115
Identity = 197/341 (57.77%), Postives = 264/341 (77.42%), Query Frame = 0
Query: 70 FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENV 129
F + ++MSRW+N VGL + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV
Sbjct: 17 FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76
Query: 130 INDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE 189
+ + E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE
Sbjct: 77 VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136
Query: 190 IVELVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNW 249
+ELVD+ E++ VA+VE+WRE E+REKWLS+F+ +AFPI+ PTG+KI+ GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196
Query: 250 QRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 309
QR+PY KPY++++ G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256
Query: 310 EVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRH 369
EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316
Query: 370 TKQL-----ESSMEIKEH-VSAADNGDCLSKSEGSWVLPIL 404
++ L E+ E K V + N D +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352
BLAST of CmaCh06G000410 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 257.7 bits (657), Expect = 1.6e-68
Identity = 138/354 (38.98%), Postives = 214/354 (60.45%), Query Frame = 0
Query: 28 TAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 87
T + +DR+RD D +K+R + K L++ + +++ ++ +GL
Sbjct: 38 TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97
Query: 88 -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 147
+ G F+ K+PHVF+++ HP++R L CR+T K ++ E + D + V RL+KL
Sbjct: 98 KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157
Query: 148 LMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 207
+MMS G + + +R+ E GLP+ F S+++K+ FRL+D E +E+V+K N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217
Query: 208 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEK 267
+++ +E+ RE E+R K + DV+F+F +NFP G+KI FR + WQRLPY PYE
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277
Query: 268 RQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 327
G+ +RS +R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337
Query: 328 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 371
GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +L+L+ R K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CmaCh06G000410 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 234.6 bits (597), Expect = 1.4e-61
Identity = 135/354 (38.14%), Postives = 207/354 (58.47%), Query Frame = 0
Query: 24 KPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRG--PFVSLQIMSRWRN 83
+ T+ + R RD + L + + L + +++L + P +S++ +SR
Sbjct: 22 RSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQ 81
Query: 84 FVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRL 143
+ L G F+ KYPH+F V P++ CR+T + +QE I + V RL
Sbjct: 82 KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 141
Query: 144 KKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD-----LEIVELVDK 203
+LL MS + ++ + A+ + +ELGLPD F +S++ K F+L D I+ELV +
Sbjct: 142 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 201
Query: 204 HEN--VAVAEVEQWREREFREKWLS--EFDVKFAFPINFPTGYKIKGGFREKLRNWQRLP 263
E A VE+WR E ++ S +++F+F ++P G ++ F+ K++ WQRLP
Sbjct: 202 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 261
Query: 264 YAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI 323
Y PYE G +S G+ EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NI
Sbjct: 262 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 321
Query: 324 RELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
R+L L HPG+FY+STKG VFLREAY +G L++PNP+Y RRK+ DL+LLGR
Sbjct: 322 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374
BLAST of CmaCh06G000410 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 160.2 bits (404), Expect = 3.4e-39
Identity = 103/317 (32.49%), Postives = 164/317 (51.74%), Query Frame = 0
Query: 66 KRGP--FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL-CCRITGKMAAL 125
KR P F++ + ++ W+ +GL + + F+ +YP +F FPH +L C ++T L
Sbjct: 62 KRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALML 121
Query: 126 MKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDD 185
QEE + E +TV+RL ++LMM + T+ + +L + +LGLPD + +++++KY D
Sbjct: 122 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 181
Query: 186 FRLVDLE----IVELVDKHENVAVAEVEQWRE------REFREKWLSEFDVKFAFPINFP 245
F V ++LV + A + +++ E E R + FP++FP
Sbjct: 182 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFP 241
Query: 246 TGYKIKGGFREKLRNW----QRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSL 305
GY G ++K++ W Q+LPY PY+ S EKRAVAVLHELLSL
Sbjct: 242 RGY----GAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLSL 301
Query: 306 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEP 365
T+ K L R + I L ++PGIFY+S K T V L+E Y +G LV+P
Sbjct: 302 TIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDP 361
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q689D6 | 2.2e-67 | 38.98 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q65XL5 | 7.5e-39 | 31.94 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
B6TTV8 | 1.3e-38 | 32.48 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
A0MFS5 | 6.1e-33 | 29.71 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q9ZUZ6 | 1.5e-23 | 27.99 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I6W3 | 7.3e-231 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A6J1FCB5 | 2.4e-226 | 98.25 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1FCD7 | 2.4e-226 | 98.25 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A1S3B7J9 | 1.9e-202 | 87.25 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... | [more] |
A0A5A7UFE6 | 1.9e-202 | 87.25 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
Match Name | E-value | Identity | Description | |
XP_022971448.1 | 1.5e-230 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima] | [more] |
XP_022937849.1 | 5.0e-226 | 98.25 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucurbita moschata] | [more] |
XP_022937832.1 | 5.0e-226 | 98.25 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784... | [more] |
KAG6596183.1 | 4.3e-225 | 97.75 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. soro... | [more] |
KAG7027720.1 | 1.6e-224 | 97.50 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
Match Name | E-value | Identity | Description | |
AT5G45790.2 | 7.5e-135 | 58.29 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 5.0e-115 | 57.77 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G33495.1 | 1.6e-68 | 38.98 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G06440.1 | 1.4e-61 | 38.14 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.1 | 3.4e-39 | 32.49 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |