CmaCh06G000410 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G000410
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionProtein ROOT PRIMORDIUM DEFECTIVE 1
LocationCma_Chr06: 238510 .. 240370 (-)
RNA-Seq ExpressionCmaCh06G000410
SyntenyCmaCh06G000410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTGCTTTCTGGTGGCGGTGACGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACTGAAACGACGCCGTATTACTATATACCATTTCTAAGCAACGATGTTGACTATAAAAAAATTAAAAAAATGGAATTTTTCCTAATTTATTAGCCGCCAATGCCATCCTTGAATGATTTATTTAAAATTTTATTTTTAAACCCTAATCCCAAAATTTAAAAATTAAAATAATTATCAATTGAAACTTTATTAAAATGAACCTTTTCTATGGATTAAAATTTGGTTTTTCGATTTTTTATTTATAAAAAATCAAATAAAAATTATACCGCCAAATGGCACTTACTAAATAGCTGAGCGAGTTGTTCGGCGGTTCGCTTTCCACTCCTACCATGCTCTGTTAGCTCTTCCCTTCTTCTGTGTACTGTTCTTCAAGTTCTAGGTAAGCTCCATTGATGTCCAATTTCATTCATGCTACTGTAATCAACAAGGTATGAAATTGTTTGAATCCGCGTTTTCTCTTTCAACAACTGATTTTTCCAGACTCCGATTCGGTCCCTTCAATCATTTCTGTCAAAGGAGATGGGGAAAGCCAGCGGTGACTGCTCAAACTCGTTTAGAAGACAGAATAAGGGACCTTAAGCTCGACACACTCGCTACCCAAATCAGAAAACTCAGAATAATCTTCAAACTCCGCGAGCTCATGATCGATCGGAAACGCGGCCCTTTCGTCTCATTACAAATCATGTCTCGATGGCGGAACTTTGTTGGACTCAGAATCGGCATTGGGGATTTCGTTCATAAGTATCCCCATGTGTTCGACGTATTTCCCCATCCGCTGAGGAGGAATTTATGCTGTAGAATTACCGGGAAGATGGCCGCCTTGATGAAACAAGAAGAGAATGTTATTAACGATTCCGAAATAGAGACCGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGCTAATGGCACTCTCCATATTCATGCGTTGAGGCTAATCAGCAAGGAATTAGGGTTGCCCGATGGGTTTAGGGAATCGATTCTTGTGAAGTATTCAGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAGTTAGTTGATAAACATGAGAATGTAGCTGTGGCCGAGGTTGAACAATGGAGGGAGAGAGAGTTTAGAGAGAAATGGCTAAGCGAATTCGATGTCAAATTTGCGTTTCCCATCAATTTCCCAACTGGGTATAAAATAAAGGGTGGTTTTAGAGAGAAACTGAGGAATTGGCAGAGGCTTCCATATGCAAAGCCTTATGAGAAGAGACAAGGCTTTGGTGTTCGTTCTTGTGGGGGGATGCATCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTGGAACGGCTTGTCCATTTTAGGCGAGATTTCGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAACACCCGGGGATATTCTACATATCAACCAAGGGGAACACCCAAATCGTTTTTCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTTGAGCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTCTTCTGTTGGGACGTAGACACACCAAGCAGTTGGAATCATCAATGGAAATCAAGGAACATGTCAGTGCAGCCGATAATGGAGACTGTTTATCTAAAAGTGAAGGAAGCTGGGTTTTGCCGATATTACAGGGCTTTGATTGA

mRNA sequence

ATGGCTTTTGCTTTCTGGTGGCGACTCCGATTCGGTCCCTTCAATCATTTCTGTCAAAGGAGATGGGGAAAGCCAGCGGTGACTGCTCAAACTCGTTTAGAAGACAGAATAAGGGACCTTAAGCTCGACACACTCGCTACCCAAATCAGAAAACTCAGAATAATCTTCAAACTCCGCGAGCTCATGATCGATCGGAAACGCGGCCCTTTCGTCTCATTACAAATCATGTCTCGATGGCGGAACTTTGTTGGACTCAGAATCGGCATTGGGGATTTCGTTCATAAGTATCCCCATGTGTTCGACGTATTTCCCCATCCGCTGAGGAGGAATTTATGCTGTAGAATTACCGGGAAGATGGCCGCCTTGATGAAACAAGAAGAGAATGTTATTAACGATTCCGAAATAGAGACCGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGCTAATGGCACTCTCCATATTCATGCGTTGAGGCTAATCAGCAAGGAATTAGGGTTGCCCGATGGGTTTAGGGAATCGATTCTTGTGAAGTATTCAGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAGTTAGTTGATAAACATGAGAATGTAGCTGTGGCCGAGGTTGAACAATGGAGGGAGAGAGAGTTTAGAGAGAAATGGCTAAGCGAATTCGATGTCAAATTTGCGTTTCCCATCAATTTCCCAACTGGGTATAAAATAAAGGGTGGTTTTAGAGAGAAACTGAGGAATTGGCAGAGGCTTCCATATGCAAAGCCTTATGAGAAGAGACAAGGCTTTGGTGTTCGTTCTTGTGGGGGGATGCATCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTGGAACGGCTTGTCCATTTTAGGCGAGATTTCGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAACACCCGGGGATATTCTACATATCAACCAAGGGGAACACCCAAATCGTTTTTCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTTGAGCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTCTTCTGTTGGGACGTAGACACACCAAGCAGTTGGAATCATCAATGGAAATCAAGGAACATGTCAGTGCAGCCGATAATGGAGACTGTTTATCTAAAAGTGAAGGAAGCTGGGTTTTGCCGATATTACAGGGCTTTGATTGA

Coding sequence (CDS)

ATGGCTTTTGCTTTCTGGTGGCGACTCCGATTCGGTCCCTTCAATCATTTCTGTCAAAGGAGATGGGGAAAGCCAGCGGTGACTGCTCAAACTCGTTTAGAAGACAGAATAAGGGACCTTAAGCTCGACACACTCGCTACCCAAATCAGAAAACTCAGAATAATCTTCAAACTCCGCGAGCTCATGATCGATCGGAAACGCGGCCCTTTCGTCTCATTACAAATCATGTCTCGATGGCGGAACTTTGTTGGACTCAGAATCGGCATTGGGGATTTCGTTCATAAGTATCCCCATGTGTTCGACGTATTTCCCCATCCGCTGAGGAGGAATTTATGCTGTAGAATTACCGGGAAGATGGCCGCCTTGATGAAACAAGAAGAGAATGTTATTAACGATTCCGAAATAGAGACCGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGCTAATGGCACTCTCCATATTCATGCGTTGAGGCTAATCAGCAAGGAATTAGGGTTGCCCGATGGGTTTAGGGAATCGATTCTTGTGAAGTATTCAGATGATTTCAGATTGGTTGATTTGGAGATTGTTGAGTTAGTTGATAAACATGAGAATGTAGCTGTGGCCGAGGTTGAACAATGGAGGGAGAGAGAGTTTAGAGAGAAATGGCTAAGCGAATTCGATGTCAAATTTGCGTTTCCCATCAATTTCCCAACTGGGTATAAAATAAAGGGTGGTTTTAGAGAGAAACTGAGGAATTGGCAGAGGCTTCCATATGCAAAGCCTTATGAGAAGAGACAAGGCTTTGGTGTTCGTTCTTGTGGGGGGATGCATCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTGGAACGGCTTGTCCATTTTAGGCGAGATTTCGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAACACCCGGGGATATTCTACATATCAACCAAGGGGAACACCCAAATCGTTTTTCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTTGAGCCCAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTCTTCTGTTGGGACGTAGACACACCAAGCAGTTGGAATCATCAATGGAAATCAAGGAACATGTCAGTGCAGCCGATAATGGAGACTGTTTATCTAAAAGTGAAGGAAGCTGGGTTTTGCCGATATTACAGGGCTTTGATTGA

Protein sequence

MAFAFWWRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD
Homology
BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.2e-67
Identity = 138/354 (38.98%), Postives = 214/354 (60.45%), Query Frame = 0

Query: 28  TAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 87
           T   + +DR+RD   D      +K+R + K   L++ +     +++ ++      +GL  
Sbjct: 38  TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97

Query: 88  -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 147
            +   G F+ K+PHVF+++ HP++R L CR+T K    ++ E   + D   + V RL+KL
Sbjct: 98  KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157

Query: 148 LMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 207
           +MMS  G + +  +R+   E GLP+ F  S+++K+   FRL+D E      +E+V+K  N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217

Query: 208 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEK 267
           +++  +E+ RE E+R K +   DV+F+F +NFP G+KI   FR  +  WQRLPY  PYE 
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277

Query: 268 RQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 327
             G+ +RS    +R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337

Query: 328 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 371
            GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +L+L+  R  K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.5e-39
Identity = 122/382 (31.94%), Postives = 209/382 (54.71%), Query Frame = 0

Query: 26  AVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL 85
           AV AQ  ++ R +++  D +  + +KL+++ KLR +++       +SL+ + R+R  +GL
Sbjct: 54  AVVAQAAVKRR-KEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGL 113

Query: 86  --RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKK 145
             +  +   + ++P VF+V    +  +L  R+T     L   E ++ N+SE   V +L+K
Sbjct: 114 TRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRK 173

Query: 146 LLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEI---VELV--DKHE 205
           LLMMS +  + I  +  +  +LGLP  FR++I ++Y   FR+V ++    +EL   D   
Sbjct: 174 LLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPEL 233

Query: 206 NVAVAEV--EQWREREFREK-WLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAK 265
            V+ AEV  E+ R RE +E+  + +  +KF   +  P G K+  G   ++  ++ +PY  
Sbjct: 234 AVSAAEVAEEENRAREEQERNLIIDRPLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYIS 293

Query: 266 PYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL 325
           PY       +RS  G    EK A  V+HE+LSLT+EK   V+ L HFR +F    ++R +
Sbjct: 294 PYSDFS--HLRS--GSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGM 353

Query: 326 LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESS 385
           L++HP +FY+S KG+   VFLREAY    LVE + + +++ KM+ L+ + R   + + ++
Sbjct: 354 LIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 413

Query: 386 MEIKEHVSAADNGDCLSKSEGS 398
            E  +      NG     SEGS
Sbjct: 414 SEEADRT----NGAAQMLSEGS 423

BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-38
Identity = 114/351 (32.48%), Postives = 191/351 (54.42%), Query Frame = 0

Query: 26  AVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL 85
           AV AQ  ++ R ++   DT+  + +KL+++ KLR +++  +    +SL+ + R+R  +GL
Sbjct: 48  AVVAQAAVKRR-KEAPFDTVIQRDKKLKLVLKLRNILV-AQPDRVMSLRELGRFRRDLGL 107

Query: 86  --RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKK 145
             +  +   + ++P VFDV    +  +L  R+T     L   E  + N+SE   V +L+K
Sbjct: 108 TRKRRLIALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRK 167

Query: 146 LLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE---IVELVDKHENV 205
           LLMMS    + I  +  +  +LGLP  FR+++ ++Y   FR+V ++    +EL      +
Sbjct: 168 LLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPEL 227

Query: 206 AVAEVEQWREREFREKWLSEFDVKFAFPINF-----PTGYKIKGGFREKLRNWQRLPYAK 265
           AV+  E   E E R +   E ++    P+ F     P G K+  G   ++  ++ +PY  
Sbjct: 228 AVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYIS 287

Query: 266 PYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL 325
           PY       +RS  G    EK A  V+HE+LSLTVEK   V+ L HFR +F    ++R +
Sbjct: 288 PYADFS--HLRS--GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGM 347

Query: 326 LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
           +++HP +FY+S KG+   VFLREAY    LVE N + +++ KM+ L+ + R
Sbjct: 348 IIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390

BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.1e-33
Identity = 101/340 (29.71%), Postives = 175/340 (51.47%), Query Frame = 0

Query: 36  RIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFV 95
           R ++L  D++  + +KL+++  +R++++ +     +SL+ + ++R  +GL  R      +
Sbjct: 78  RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALL 137

Query: 96  HKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTL 155
            KYP VF++       +L  ++T +   L   E  + N+ E   V +L+KL+MMS +  +
Sbjct: 138 RKYPGVFEIVEEG-AYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197

Query: 156 HIHALRLISKELGLPDGFRESILVKYSDDFRLVDL---EIVELVDKHENVAVAEVE---- 215
            +  +  +  +LGLP  FR++I  +Y   FR+V       +EL      +AV+  E    
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSED 257

Query: 216 QWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVR 275
             R RE  E+ L          +  P G  +      K+  ++ + Y  PY   + F   
Sbjct: 258 DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHL 317

Query: 276 SCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYIS 335
             G + + EK A  V+HELLSLT EK   V+ L HFR +F     +R +L++HP +FY+S
Sbjct: 318 RSGTLEK-EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 377

Query: 336 TKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
            KG    VFLREAY    L++ +P+ +V+ KM+ L+ + R
Sbjct: 378 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411

BLAST of CmaCh06G000410 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.5e-23
Identity = 96/343 (27.99%), Postives = 158/343 (46.06%), Query Frame = 0

Query: 38  RDLKLDTLATQIR--KLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHK 97
           RD   D +   +R  +L+ +  L+  ++           I  + R F  +   I  F+ K
Sbjct: 33  RDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF-DVSTKIAHFLRK 92

Query: 98  YPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHI 157
           +P +F+ F  P       R+T +   L +QE  V   S  +   RLKKL++MS +  L +
Sbjct: 93  FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152

Query: 158 HALRLISKELGLPDGFRESILVKYSDDFRLVDLE--IVEL-VDKHENVAVAEVEQWRERE 217
             ++ +   LGLPD + +   +     FR VD+E  +  L VD +    V  V Q    +
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 212

Query: 218 FREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMH 277
            R   +S  +++  FP+    G +++    + L  +Q+LPY  PY+        S     
Sbjct: 213 KRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS----D 272

Query: 278 RHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ 337
             EKR V  LHELL L VE   + ++L+  ++ F +   + +   +HP IFY+S K  T 
Sbjct: 273 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 332

Query: 338 IVFLREAYAKGCLVEPNPIYIVRRKM------QDLLLLGRRHT 370
              LRE Y     VE +P+  VR+K        +L+L  RR++
Sbjct: 333 TAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match: A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 7.3e-231
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR
Sbjct: 17  RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 76

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 256

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416

BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match: A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.4e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 17  RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 76

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match: A0A6J1FCD7 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.4e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407

BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match: A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/400 (87.25%), Postives = 375/400 (93.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           R+ FGPFNHFCQ+RW KP V+AQTRLE R RDLKLD LATQ++K R+I KL ELM +RKR
Sbjct: 20  RIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRKR 79

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRN VG+RIGIG+F+HKYPHVFDVFPHP+RRNLCCRITGKM ALMKQEE
Sbjct: 80  GPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQEE 139

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVIND EIETVQRLKKLLMMS NGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVD
Sbjct: 140 NVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVD 199

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELV+KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTG+ I+GGFREKLRN
Sbjct: 200 LEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRN 259

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPY +PYEKRQ FG RS GG+ RHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDFA
Sbjct: 260 WQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDFA 319

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRR
Sbjct: 320 IEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRR 379

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKE+ +AADNGD LSKSEGSWVLPILQGFD
Sbjct: 380 HTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419

BLAST of CmaCh06G000410 vs. ExPASy TrEMBL
Match: A0A5A7UFE6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006380 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202
Identity = 349/400 (87.25%), Postives = 375/400 (93.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           R+ FGPFNHFCQ+RW KP V+AQTRLE R RDLKLD LATQ++K R+I KL ELM +RKR
Sbjct: 31  RIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRKR 90

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRN VG+RIGIG+F+HKYPHVFDVFPHP+RRNLCCRITGKM ALMKQEE
Sbjct: 91  GPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQEE 150

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVIND EIETVQRLKKLLMMS NGTLH+HALRLIS+ELGLPDGFRESIL KYSDDFRLVD
Sbjct: 151 NVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVD 210

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELV+KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTG+ I+GGFREKLRN
Sbjct: 211 LEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRN 270

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPY +PYEKRQ FG RS GG+ RHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDFA
Sbjct: 271 WQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDFA 330

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIVRRKMQDL+LLGRR
Sbjct: 331 IEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRR 390

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKE+ +AADNGD LSKSEGSWVLPILQGFD
Sbjct: 391 HTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430

BLAST of CmaCh06G000410 vs. NCBI nr
Match: XP_022971448.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR
Sbjct: 17  RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 76

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 256

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416

BLAST of CmaCh06G000410 vs. NCBI nr
Match: XP_022937849.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 794.3 bits (2050), Expect = 5.0e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407

BLAST of CmaCh06G000410 vs. NCBI nr
Match: XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 794.3 bits (2050), Expect = 5.0e-226
Identity = 393/400 (98.25%), Postives = 395/400 (98.75%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 17  RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 76

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 376

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of CmaCh06G000410 vs. NCBI nr
Match: KAG6596183.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 791.2 bits (2042), Expect = 4.3e-225
Identity = 391/400 (97.75%), Postives = 393/400 (98.25%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLRIIFKLRELMIDRKR
Sbjct: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKR 67

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 128 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 247

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPY KPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 248 WQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAY KGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPIYIVRRKMQDLLLLGRR 367

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 368 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407

BLAST of CmaCh06G000410 vs. NCBI nr
Match: KAG7027720.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 789.3 bits (2037), Expect = 1.6e-224
Identity = 390/400 (97.50%), Postives = 392/400 (98.00%), Query Frame = 0

Query: 8   RLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKR 67
           RLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRKLR IFKLRELMIDRKR
Sbjct: 17  RLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRTIFKLRELMIDRKR 76

Query: 68  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 127
           GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE
Sbjct: 77  GPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEE 136

Query: 128 NVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 187
           NVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD
Sbjct: 137 NVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD 196

Query: 188 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRN 247
           LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG+KIKGGFREKLRN
Sbjct: 197 LEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRN 256

Query: 248 WQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 307
           WQRLPY KPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA
Sbjct: 257 WQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFA 316

Query: 308 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRR 367
           IEVNIRELLLKHPGIFYISTKGNTQIVFLREAY KGCLVEPNPIYIVRRKMQDLLLLGRR
Sbjct: 317 IEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPIYIVRRKMQDLLLLGRR 376

Query: 368 HTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 408
           HTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 377 HTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of CmaCh06G000410 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 478.0 bits (1229), Expect = 7.5e-135
Identity = 232/398 (58.29%), Postives = 306/398 (76.88%), Query Frame = 0

Query: 13  PFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVS 72
           P   + QRRW KP  +AQTRLE+R RD +LD +  QIRKL II ++ +LM  +KRGPFVS
Sbjct: 45  PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104

Query: 73  LQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVIND 132
           LQ+MSRW+N VGL + +G F+ KYPH F++F HP  +NLCC+IT K   L+ +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164

Query: 133 SEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVE 192
            E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224

Query: 193 LVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRL 252
           LVD+  E++ VA+VE+WRE E+REKWLS+F+  +AFPI+ PTG+KI+ GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284

Query: 253 PYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 312
           PY KPY++++        G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D  IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344

Query: 313 IRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQ 372
           +RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL  R+++ 
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404

Query: 373 L-----ESSMEIKEH-VSAADNGDCLSKSEGSWVLPIL 404
           L     E+  E K   V  + N D     +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437

BLAST of CmaCh06G000410 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-115
Identity = 197/341 (57.77%), Postives = 264/341 (77.42%), Query Frame = 0

Query: 70  FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENV 129
           F + ++MSRW+N VGL + +G F+ KYPH F++F HP  +NLCC+IT K   L+ +EENV
Sbjct: 17  FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76

Query: 130 INDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE 189
           + + E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE
Sbjct: 77  VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136

Query: 190 IVELVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNW 249
            +ELVD+  E++ VA+VE+WRE E+REKWLS+F+  +AFPI+ PTG+KI+ GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196

Query: 250 QRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 309
           QR+PY KPY++++        G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D  I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256

Query: 310 EVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRH 369
           EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL  R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316

Query: 370 TKQL-----ESSMEIKEH-VSAADNGDCLSKSEGSWVLPIL 404
           ++ L     E+  E K   V  + N D     +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352

BLAST of CmaCh06G000410 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-68
Identity = 138/354 (38.98%), Postives = 214/354 (60.45%), Query Frame = 0

Query: 28  TAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 87
           T   + +DR+RD   D      +K+R + K   L++ +     +++ ++      +GL  
Sbjct: 38  TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97

Query: 88  -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 147
            +   G F+ K+PHVF+++ HP++R L CR+T K    ++ E   + D   + V RL+KL
Sbjct: 98  KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157

Query: 148 LMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 207
           +MMS  G + +  +R+   E GLP+ F  S+++K+   FRL+D E      +E+V+K  N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217

Query: 208 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGYKIKGGFREKLRNWQRLPYAKPYEK 267
           +++  +E+ RE E+R K +   DV+F+F +NFP G+KI   FR  +  WQRLPY  PYE 
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277

Query: 268 RQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 327
             G+ +RS    +R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337

Query: 328 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 371
            GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +L+L+  R  K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

BLAST of CmaCh06G000410 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-61
Identity = 135/354 (38.14%), Postives = 207/354 (58.47%), Query Frame = 0

Query: 24  KPAVTAQTRLEDRIRDLKLDTLATQIRKLRIIFKLRELMIDRKRG--PFVSLQIMSRWRN 83
           +   T+   +  R RD   + L  + + L  +  +++L +       P +S++ +SR   
Sbjct: 22  RSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQ 81

Query: 84  FVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRL 143
            + L  G   F+ KYPH+F V   P++    CR+T     + +QE   I  +    V RL
Sbjct: 82  KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 141

Query: 144 KKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD-----LEIVELVDK 203
            +LL MS + ++ + A+  + +ELGLPD F +S++ K    F+L D       I+ELV +
Sbjct: 142 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 201

Query: 204 HEN--VAVAEVEQWREREFREKWLS--EFDVKFAFPINFPTGYKIKGGFREKLRNWQRLP 263
            E      A VE+WR  E  ++  S    +++F+F  ++P G ++   F+ K++ WQRLP
Sbjct: 202 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 261

Query: 264 YAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI 323
           Y  PYE   G   +S  G+   EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NI
Sbjct: 262 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 321

Query: 324 RELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 367
           R+L L HPG+FY+STKG    VFLREAY +G L++PNP+Y  RRK+ DL+LLGR
Sbjct: 322 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374

BLAST of CmaCh06G000410 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.4e-39
Identity = 103/317 (32.49%), Postives = 164/317 (51.74%), Query Frame = 0

Query: 66  KRGP--FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL-CCRITGKMAAL 125
           KR P  F++ + ++ W+  +GL + +  F+ +YP +F  FPH    +L C ++T     L
Sbjct: 62  KRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALML 121

Query: 126 MKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRESILVKYSDD 185
             QEE +    E +TV+RL ++LMM  + T+ + +L  +  +LGLPD + +++++KY D 
Sbjct: 122 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 181

Query: 186 FRLVDLE----IVELVDKHENVAVAEVEQWRE------REFREKWLSEFDVKFAFPINFP 245
           F  V        ++LV   +  A + +++  E       E R +          FP++FP
Sbjct: 182 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFP 241

Query: 246 TGYKIKGGFREKLRNW----QRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSL 305
            GY    G ++K++ W    Q+LPY  PY+        S       EKRAVAVLHELLSL
Sbjct: 242 RGY----GAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLSL 301

Query: 306 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEP 365
           T+ K      L   R +  I      L  ++PGIFY+S K  T  V L+E Y +G LV+P
Sbjct: 302 TIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDP 361

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q689D62.2e-6738.98Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q65XL57.5e-3931.94Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV81.3e-3832.48Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
A0MFS56.1e-3329.71Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q9ZUZ61.5e-2327.99Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A6J1I6W37.3e-231100.00protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FCB52.4e-22698.25protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1FCD72.4e-22698.25protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A1S3B7J91.9e-20287.25protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... [more]
A0A5A7UFE61.9e-20287.25Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
XP_022971448.11.5e-230100.00protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima][more]
XP_022937849.15.0e-22698.25protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 [Cucurbita moschata][more]
XP_022937832.15.0e-22698.25protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784... [more]
KAG6596183.14.3e-22597.75Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. soro... [more]
KAG7027720.11.6e-22497.50Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
Match NameE-valueIdentityDescription
AT5G45790.27.5e-13558.29Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.15.0e-11557.77Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G33495.11.6e-6838.98Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT1G06440.11.4e-6138.14Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.13.4e-3932.49Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 38..366
e-value: 4.5E-107
score: 357.7
NoneNo IPR availablePANTHERPTHR31476:SF12UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 9..406
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 9..406

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G000410.1CmaCh06G000410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding